Ll_transcript_58314

Id TrinityFTRINITY_DN57805_c4_g1_i12
Name TranscriptLl_transcript_58314
SequenceGTTTTTTCTTTTCTTTCTTAACACAAAAAGAAAAGAAGCTTTGCAAGTTTACTGTAAATATGGAAATCATATTTGAAGACCACTAACAATTAAGAATGGT GATTTCTTTAAGAAATTATCACTAGATTTGAAAAAAGTTATGTACACATTTTTTAGTTTATATTTATAGTGTAATGTTTCAGGCTTGAGGAAAATAAGAC GCTTGTCCTTACTCCATTTGAGAAAAATATTGATATCTGGAGACAGCTCTGGCGGGTTGTTGAGCGCAGTGATTTGGTAAGTTGAAATGATCTTTTGACG TTTTACCTGGAAAATTCTACTTTTGGGTCAATGAAGGTTTTAAACTTATCTTTTTTATCAACTGTGTAATTCAGAGGTAAGTACGACTTGCCACTTACCA CAATGCAGAATGATTTCACATGCATTTTTAATAGTTTTTGTTGAAATTATACTTGGTTACAGTGTTACACTACCATATATGTTACAACGATTTCTTAATT AGAAATGAACTCAATGAAGATGGGCATGGTACCCATTTCATGAATGGTTCTTGCGAATATTTATGATTACCGAACAATTGTGCATATCCATGGATTGTTT CTCAATATAGAGTACTCATTCATTTTCTTGAAGAAAATAAGCTTTTATTCTTTAAATGTATAAATTACTTTTCTGTTGGTGAGTTCAATCTCACTTTCCT TATGGCATATGGTGGATGTTGTACTTGGTGAGGTGAGTGTTAAATGAAAGTACAATATTTTTAATCTTCAGATATATTTGATCTCCTTTCCTTAATTATA TAAAATGGTTATTATCATATTGACAGATAAGATACAGAGGCAATCCCACATTTGTCGATCTTTAGTTATTTATTCCTTTTTATGTGTATCGACTTTTGAT TACATTATAAAAGCTGCCCTCTTCTTTGATTCTGTTCATTTTTCAAAGAAGATGGAAAGTGTCTTCAATTAGCCAGACCTGCATCATTAGCTGGAAAATG AAGGAAAGGTCCACCAGTTCACCTAAGATGTTCCTTAAAACAATATATTTTTTTTACTTTAAGTTTTTGTTTTAAAAAAATGTTGGCAAGGATCATGGAT GCTTACTTTTATCCCTCAGTTATACATTCATTCTTTTCTACAATTCTTCCCACCAACATAAGATATTTTCCCTAAAAGCATTTGCAAATTGCTAATTTTG ATTTTATCACATATAATAGTGATTTTTATCTGGATTTCCTCATTGTTGTTAATTTTAAGTTTCATGAAATCTTTAAGATGATCTCATTCTCTTGCATCTT TTTACCAGCTTGTTATGGTCGTTGATTCGCGGGATCCTCTGTTCTATCGCTGTCCTGATCTTGAGGCTTATGCACGGGAGGTTGATGAGCATAAGCGCAC ATTGCTTTTGGTTAACAAGGCAGATCTGTTACCTACTTCTATCAGAGAGAAATGGGCAGAATATTTTCGTGCTCATGATATTCTCTTCATTTTCTGGTCA GCTAAAGCTGCTACTGCAGTTCTGGAAGGCAAGAAGCTTGGTTCATCATGGGAGGCTGATAACATGGGGGAAACTAATAACCCAGACACAAAGATATATG GAAGGGATGAGCTTCTGGCCCGCTTGCAATCAGAGGCTGAAGAGATAGTTGAGAGGAGAAATTCAGCCTCCTCTGACACAGGACCATCTAATGTTGGTAG TTCGTCGTCAGGTAATGTAATTGTGGGATTTGTTGGATATCCTAATGTGGGGAAAAGTTCAACTATCAATGCTCTGGTTGGTCAAAAAAAGACCGGTGTT ACCTCTACTCCAGGGAAAACAAAGCACTTCCAGACATTAATTATTTCCGAAAAACTGACCCTTTGTGACTGCCCTGGATTAGTTTTTCCATCTTTCTCAA GCTCAAGATATGAGATGATTGCTTCTGGAGTGTTGCCTATTGATAGGATGACTGAACACAGGGAATCTGTCCAAGTTGTAGCTGATAGAGTCCCAAGACA TGTCATCGAGGCGACTTATAAGATCAAACTTCCTAGACCTAAGTCATATGAGTCCCAAGTCCGCCCCCCATTGGCATCTGAACTTATGAGATCGTATTGT GCTTCTCGCGGGTATGTTGCTTCTAGTGGACTTCCCGACGAAACTAGGGCTTCCCGTCAGATTCTGAAAGATTACATTGATGGGAAGCTGCCACACTATA CAATGCCCCCTGGTGTGTCAAACGAGGAACTCACTGTAGAGGATCCTGAAGGACATGACTCTGATAACTTGCAGGAGTCAGATTCATCTGGTATTGAAGA TTCTTCAGATGTTGAGAAAGAAGTTGCACCAGCAAATCTTGAACACTTATTGGATGACCTCAATTCATTTGACATCGGTAATGCACTTGCTACTTCAAAG AAAAGCAGTGTTAAGAAGTCCAAGGAATCTCAGAAGCATCATAAAAAGCCTCAGAGGAAGAAAGATCGTACATGGAGGGCCGGGAATGATGGTGGTGATG GAACGCCGATTGCAAGAGTCTTTCAGAAACCAGTAAACACAGGTCCCTCGAAGGTCTGATAAGGTAATGCCCTCAGGTTTTTGTACATGTTGTCTGTTAG AGTCATAAGTACGTTGTTGATCTGAGGTGTGTGGTGGAACAAGTTATAAATGGTGTTTTTTTGTAAGGCATTTCACAAATAGAACGTAGGCATTTATACT ACTCAAGGTTATTCACAGCAGAGTTCTTATTGATGTGAGGAAAATTGTCCTAGGATTGAAGAATAATATTATCATTTTAATTATTGTAAACCTTTGATAT GTTAAAGTCATCTTTAATTTTGATTATAATCTATTTGACTCGGGAAGAATCTATATTGAAAAAATCAAATTTGTT BLAST
Tissueflowers
Gene nameLI_gene_71805; 
Additional informationdetails; 

Expression of Ll_transcript_58314

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_58314

BlastpGTPase LSG1-2 from Arabidopsis with 67.14% of identity
BlastxGTPase LSG1-2 from Arabidopsis with 67.63% of identity
EggnogRequired for a late step of 50S ribosomal subunit assembly. Has GTPase activity (By similarity)(COG1161)
KeggLink to kegg annotations (AT1G08410)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019448890.1)
Pfam50S ribosome-binding GTPase (PF01926.22)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;
Links to GO: General; Genes and gene products; Annotations; Ontology;