Ll_transcript_58316

• Id Trinity: FTRINITY_DN57805_c4_g1_i14
• Name Transcript: Ll_transcript_58316
• Sequence: AATACTTATACGGGTTAAAGTGTTAAACCCTAAATTGCCGAAAGCCACAACACAAGTTTATTCGAGAAAAGAAAAAGCGGTGGAACGAAGCTGAAGTTGG GTGACTCTGAATTTGAGGGTTTAAGGTGAGATAAGAAAACAACGGTGGTTGATTGATTCCATTGGCAACAATGGGAAAGAACCAGAAAGTAGGGTTAGGG AGATCCCTTGTTAAGCAACACAATCATATGATTCAACAAACCAAAGAAAAGGGTCGTATCTACAAGAAGAAGTTTCTAGAATCATTCACTGAAGTTACCG ACATCGCCGCCATCATTGAAAAATCGGAAAACCCCGACGCCGATTCCGATTCCGATGCCGATGTTCCTTTTCTGCCCCCCGCACCGCCTACCCTTCGCAT CAATATGGATCCAAGGTCCGAGTCTGTTGACTTGACGCCTGAAGAGATGAAGGAGCAGCAGAAGAGGGAGGAGGCACTGCATGCTAGCAGTCTCCGAGTT CCACGCAGGCCACCGTGGACGGCAGACATGTCTGTGGATGAGCTTGATGCTAATGAAAGACAATCTTTCTTGACTTGGCGTCGCAGCCTTGCTAGGCTTG AGGAAAATAAGACGCTTGTCCTTACTCCATTTGAGAAAAATATTGATATCTGGAGACAGCTCTGGCGGGTTGTTGAGCGCAGTGATTTGCTTGTTATGGT CGTTGATTCACGCGATCCTTTGTTCTATCGCTGTCCTGATCTTGAGGCTTATGCACGGGAGGTTGATGAGCATAAGCGCACATTGCTTTTGGTTAACAAG GCAGATCTGTTACCTACTTCTATCAGAGAGAAATGGGCAGAATATTTTCGTGCTCATGATATTCTCTTCATTTTCTGGTCAGCTAAAGCTGCTACTGCAG TTCTGGAAGGCAAGAAGCTTGGTTCATCATGGGAGGCTGATAACATGGGGGAAACTAATAACCCAGACACAAAGATATATGGAAGGGATGAGCTTCTGGC CCGCTTGCAATCAGAGGCTGAAGAGATAGTTGAGAGGAGAAATTCAGCCTCCTCTGACACAGGACCATCTAATGTTGGTAGTTCGTCGTCAGGTAATGTA ATTGTGGGATTTGTTGGATATCCTAATGTGGGGAAAAGTTCAACTATCAATGCTCTGGTTGGTCAAAAAAAGACCGGTGTTACCTCTACTCCAGGGAAAA CAAAGCACTTCCAGACATTAATTATTTCCGAAAAACTGACCCTTTGTGACTGCCCTGGATTAGTTTTTCCATCTTTCTCAAGCTCAAGATATGAGATGAT TGCTTCTGGAGTGTTGCCTATTGATAGGATGACTGAACACAGGGAATCTGTCCAAGTTGTAGCTGATAGAGTCCCAAGACATGTCATCGAGGCGACTTAT AAGATCAAACTTCCTAGACCTAAGTCATATGAGTCCCAAGTCCGCCCCCCATTGGCATCTGAACTTATGAGATCGTATTGTGCTTCTCGCGGGTATGTTG CTTCTAGTGGACTTCCCGACGAAACTAGGGCTTCCCGTCAGATTCTGAAAGATTACATTGATGGGAAGCTGCCACACTATACAATGCCCCCTGGTGTGTC AAACGAGGAACTCACTGTAGAGGATCCTGAAGGACATGACTCTGATAACTTGCAGGAGTCAGATTCATCTGGTATTGAAGATTCTTCAGATGTTGAGAAA GAAGTTGCACCAGCAAATCTTGAACACTTATTGGATGACCTCAATTCATTTGACATCGGTAATGCACTTGCTACTTCAAAGAAAAGCAGTGTTAAGAAGT CCAAGGAATCTCAGAAGCATCATAAAAAGCCTCAGAGGAAGAAAGATCGTACATGGAGGGCCGGGAATGATGGTGGTGATGGAACGCCGATTGCAAGAGT CTTTCAGAAACCAGTAAACACAGGTCCCTCGAAGGTCTGATAAGGTAATGCCCTCAGGTTTTTGTACATGTTGTCTGTTAGAGTCATAAGTACGTTGTTG ATCTGAGGTGTGTGGTGGAACAAGTTATAAATGGTGTTTTTTTGTAAGGCATTTCACAAATAGAACGTAGGCATTTATACTACTCAAGGTTATTCACAGC AGAGTTCTTATTGATGTGAGGAAAATTGTCCTAGGATTGAAGAATAATATTATCATTTTAATTATTGTAAACCTTTGATATGTTAAAGTCATCTTTAATT TTGATTATAATCTATTTGACTCGGGAAGAATCTATATTGAAAAAATCAAATTTGTT
• Tissue: flowers
• Gene name: LI_gene_71805;
• Additional information: details;

Expression of Ll_transcript_58316

FPKM

• FPAB: 13.8
• FPNAB: 23.2
• LF1: 13.6
• LF2: 12.3
• LF3: 14.1
• LF4: 18.4
• UF1: 11
• UF2: 12.2
• UF3: 14.7
• UF4: 13.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_58316

• Blastp: GTPase LSG1-2 from Arabidopsis with 65.5% of identity
• Blastx: GTPase LSG1-2 from Arabidopsis with 65.94% of identity
• Eggnog: Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity (By similarity)(COG1161)
• Kegg: Link to kegg annotations (AT1G08410)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019448890.1)
• Pfam: 50S ribosome-binding GTPase (PF01926.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;