| Id Trinity | FTRINITY_DN57806_c1_g2_i4 |
|---|---|
| Name Transcript | Ll_transcript_56116 |
| Sequence | AAAATGCAGCAAATCATCATCAACCAACTGAACAAAAGTCTTAAAAGAGTGCAGCATCTTTCATTAACACACCTTGGTTCCTATTCATTCTCTAAACATG CTGGTCAAATAAAAGACCAGTTCATACACATAAAGCAAATACAGTGAGCATTCTCTTCTTCATTCAGCACCTTCAGAGTTCCGAGGCACAACTTTTTCAT ATGAGATAGGTTGACCCATGCTTGAAAGACAAATACCACCTTGAAGGCATGCAAATCCCTATCAAAATGGAATGAAAGAGAAATGAATAGAAAGCACAAT AAGGCTTGAAAGTTATTCCAGTTCTAATTTCAGCATACAGCGTTACAAGGATGAAAGAAGCTAAGCATGACATGAGTAAAGAACATGTCCACCCAGTATG AAAGACTGCAACATCAATAAAAAGCCTAGTGGAATTGATGCAAATTTACATCAATATAATTATCATACTTGTTGTATAATATGGGGAAACCCTGAGCGGA TGCAAGGTCAAGGGTGCAACTCTTCCTGCAAAGTTTTTTATAGAGTAATTACAGAACCTCAGAAAAAGTTAAACACTAAATACAAGCAAAACATATGGCT TCAGCAATTACACTGAGGCTACGAAATCCAGAAGGCAGAAGGGGGCATCATCAGCAAAGCAAAGGATACATCCATTGGTCAACACAAATGGTAAACTTAA GCTAGAAATTAAGCGGAGAAGAGGATCAAGGTCACTTTCGATTTGGGAGGGAAATTTGTAATAAAACCCCAAAAAATTCCTTACAACTTACAATCTAAAT CAACGGGACAAAATTTCAACATTCAACATCACCCAGATTTAATTTCTATTCTGTGAAGTAAGGAATATAACATGAGCACTACAGTGCAAAAAACTCCAAG ATCTGGTAGGCAGTCATTATTTTTCAAGGATTTGGCTTCACCTGTTTCAACCCGGAGAGGAAAATTTTCAAGTCCGGGCCAGGCAGCTCCAGTTTCTACT CCATGGCGTGAGAACTTTGGTGGTTCAGACCTTCCACCACCTCCTTTTTACACTTTGGAAGACAGATCAGACTTTTCTCCTGAATCCGGTATACCTGATT ACCAGGTATCCCCAGAGACTAAGTCAGACCCTAGATCTCCAATGCAATCTTCAAATACGGAATTTTCAACTCCACTGAAAAACAAATCAGAGGCCAGCAC ATCTTATGCTTTACGTGGAGTGCAGCAAAACCATCAGGACTCACCAGGTTTGAATTGGTGGTCACCTGTACCTGCAAAGAGTGGCAGCGAGCAAGATGAC AAGGCGACGAGTTCACCAGTTGAGGGTGTAATACAGCCTGGTGCTCTGATTACTCTTCCGCCACCACTGGAAGTGGCAAGGCCTGAGGTCAAAAGAAATT CCTTCCCAGCAGGGAATCTCATTGAGGAAGAATGGGTAACAGTTTATGGGTAATGCCTTAACTCCAATTAACATTTAAGTTTCATCTATTGCTTAGGAAC AAACATAATCCTTCTCTACTATAAATATAACTATAGACACCTACCTTTGAAGTTCAGCACATTTTGCAGAAGAGAAATACATTGTTAAGTTGGAATAAAA TAACATAAATTTTAAGTCCTTGCTCCTAAATAATCAATAAGTTGCTCCAAACACTTCAGGTCAAAACTCATGCTTCCTTGACATGCCTTTTCTGAATGTA ACATTTCATTAGTATTACTTTTTTTATTGTGTATCACTGTCCAACCTAGGGACTTCATTTTAGGAGGAGTGGCTTTGGGCTCCTAGCTGGATAGTTTTGA GAATTGTTAGTGATAAATGAAAAATTATGGACAAAACTATTTTCTTTGGCAAATGTGTAGGAACCAGGAACTTTTTTCTGGATATATTATGGACAAAACT ATTTACAGTTGTCTTTGGAGGTTTCAAACAGATTGCCATGCATATATGCTTATTTTCAAGAAGTGCCCCAGGCAAAATGAGTTTTCTGATAAATGACAAT AACATATCAACGATACCTAATATATCACTTGAAGAAAAGTTGGGGATGACAATTAAGATGGGAAACACGGCAAGTTCATGGACTGATATGAACTGTTTTA GTTTAAAACTGTACATAAAGAAGAATTTCAGTGTTGGATGATGTGTTTCATTGTTAACTATATTTGGATTTGGGTGATTGTCGAGTTTCCATGAGTTGTT TTTGGGCAATGTGGTTGTTTTTCGATTATCAATCTTTTAGTGTGTTAAGAGAGGGGGAGAGAGAGATACTATTTGGTGTAGCCATATGACCCACACAATA CTTGAAAATATAAATGTGCTGTTAGCTATACTCCCTATCTGATGATCAGTGAGTAATATGATGTATATGTTGAAGCTTTGAGTATGCACTTGAATATCTT TGATGAGTCCTATTGAATTTTTTGCATCTGTTTTGAGATGCCAAACCAATAAGCTAAAGACATCTACTTTCAATATTGTATATACCAATATAAATGCTTG TAATAATGCTCTTTCTGTTTCTGTGCAGATTTTCTCCATATGATACTAATTTGGTTTTGAGGGAATTTGAAAAATGTGGTGAAATTTTGAAACATGTTCC TGGACCTAGAGATGCTAACTGGATCCACATTTTGTACCAGAATCGATCTGATGCCCAAAAAGCTCTTAACAAGAATGGAATGCAAATTAATGGAGTCCTA ATAGTAGGTGTTAAGCCTTTAGATCCCATGCAACGCCAATCTTTGAATGAAAGGCAGAACAATCAGGAATTTATGCCTTTGCCTCTATCCTCTGCTAGAA TTTCAGAAACAAGCACACTGAGAGCTTCTTCTCGACCCTATTATCTTCAGAATGGTAACTCAGCTGTTCGCCAGGCAGGAGGTACCATTGCTTCTCCAAC AAAATCATTGGTGTCCAAGGTCATGGATTTGATGTTTGGAGTCTAGATTTAGCTGCTATGGTGAATCAGCCTATTTCATTCTGTTCTGTTGTAAGCAATG GTTTTACTTTCTGCTACTATTCATGCACAATGCAGAGTTCAGACATATCTTTATAGGATTTGAGTTGTGGAACATTTGCTCTTTGGATCTCAGTTTTTGG AATTTATGGCATTTACTATTTGCAGTTTTATATGGGAATTCTTGGTACCCATATGTACTAAGTAGTTATAGGGAGTGTAGTTCATTACCCTAAACCTTGT TTCATTTTCACAATTATAATGCTTAACATCAAATCAAATGGGCGTATAACTACTTATTGAATATGCACATAAGGTAAACCACTGAACTGAAGTAGCGCCA TAATGTAATTATCAACACGTTCAGCACATAAATAATATAATATGGCCG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71811; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56116
| Blastp | Nuclear pore complex protein NUP35 from Arabidopsis with 68.39% of identity |
|---|---|
| Blastx | Nuclear pore complex protein NUP35 from Arabidopsis with 68.39% of identity |
| Eggnog | nucleoporin(ENOG4111ARE) |
| Kegg | Link to kegg annotations (AT3G16310) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019458803.1) |
| Pfam | - |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |