Id Trinity | FTRINITY_DN57808_c0_g1_i8 |
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Name Transcript | Ll_transcript_58030 |
Sequence | TTTTTGGACCTGGATATACAGGATTGGTCAATCTTGGGAACAGTTGTTACTTGGCAGCAACTATGCAAGTTGTGTTTTCAACAGGATCTTTCTCTTCAAG GTACTATATAAACCAAAATTTAAAGAAGGCGTTTGAGGCTGCTCCTGCTGATCCAACTGTGGACCTAAATATGCAGTTGACAAAGCTGGCTCATGGTCTT CTGTCTGGTAAATATTCTACTCCAGCTTCTCAGAATGATGAAAATGCAAGTGTTGCCTCTTCAACTTTGACTGATGTAAGCTTTCTAACCCTTTTACAAG CATTTTTGTGTGTGTGTGTGTGTGTGGGATTATATACTGTTCTAGTCCCAGAAATGAAATGGTTATTTAAATGAGCTTTGGTAAGAGTGGGTTTAATTTA ACGTGTTGCTATGATTTTATTTTAAAAGTAAAAGATTCATGCTATTTATTATTCTCAACTTCTAGTCCTTTCATTTTATTGTTTCTTATTATGATGAGTT TTCTTTGCTTATTTTTTCTGTTTGCCCTTATCTTCAAACATAAGAAACAAGAAGGGATACCTCCACGTATGTTTAAAGCTGTAATTGCTGCTAGCCATCC TGAATTTTCATCTATGCGGCAACAGGATGCTTTAGAATTTTTCCTTCATTTTATTGACCAAGTTGAGCGAGCTAATAGTGGGAAAACTGAACTGGATCCT TCGAGGAGTTTCAAGTTTGGTATTGAAGATCGAATCTTGTGTTCCTCTGGAAAAGTTGCATATAATAGAAGGAACGATTACATCCTTTCCCTTAATATCC CATTGCATGAAGCAACTAACAAAGAGGAACTAGAATCTTTTCACAAACTGAAAGCTGAGAAACTTTCTGAAGGAAAGGAAGTGTCCGGCGATGAGATTGT ACGTCCAAGGGTGCCTTTAGAAGCTTGCCTTGCAAACTTTTCAGCTCCTGAGGAGATACATGATTTTTACAGCACTGCCTTGAAAACAAAGACAACAGCT GTAAAGGCAGCTGGTCTGACATCGTTCCCTGATTACCTGGTGTTACACATGAGGAAATTTGTTATGGAAGCGGGATGGGTACCCAAAAAGCTTGATGTGT ATATAGATGTTCCTGATATTATAGATATTAGTCATATGCGTAGCAAAGGTCATCAACCTGGGGAAGAGCTGTTGCCAGATGGGGTACCTGAGGAAGATTC AGACAAACCTTGGGTCAATGAAGAAATTGTTTCGCAGCTGGTTTCCATGGGCTTTAACCATATTCATTGTGAGAAAGCTGTAATAAATACCTCAAATGCT GGTGTAGAAGAGGCCATGAATTGGTTACTATCCCACATGGATGATCCGGATATTGATGCTCCTATTTCAAAAGGGCAAGGTAGTGAGAGTGTTGACCAAT CAAAAGTTGATACTCTAATTTCATTTGGATTTCAAGAAGATGTTGCTCGAAAGGCACTAAAGGCATCGAATGGTGACATTGAGAAAGCAACAGATTGGAT ATTCAGCAACCCTGATGCAACAGTTTCTAGTATGGATGCTACCTCATCAAACAATGCATCTGTTCCAAATGGTGATGACTTACCTGATGGAGGAGGAAAA TACCGACTTATTGGAATTGTTAGCCACATCGGAACCTCTACGCAGTGTGGTCACTATGTTGCTCACATCTTGAAAGATGGTAGATGGGTTATTTTTAACG ACAACAAGGTTGGGGTATCCATTAATCCTCCGAAGGACATGGGATATCTTTATTTCTTCGAGAGGCTTAGTGAATGAATTAGATACTGTGTTTAAAACTA TTGAACACCAGTGAACATTTCAAATGTAAAGAAAGGCACAGTGCATTGTAGAACGGCGCAATCGTCGACATTGTGCTGATGGTTTGTTTCCCTCCCTGTG TTGGTGCTTGGTGGATGCTTGGTAAGTCCTCATTGACTTCAGCATTATTTTGTGTAAACCTGTAACAGTGCACCATTCTTGGAACTAGTACACATAAATA GACCCTTCTTTGATCTTTTAGAAACTGAGTTCATTGTTTCATTTTCTCCCAGAGTTGTCATTTTAAATGAAAAGTTCAAAAATGACACCTTTCAGGACTT GATAAATGTCTCAACTCTTCACTAATGCATTACATTTCCCAAATTTGTTATCCTTGGCCCTTAGGTTGAGGATGGGCAATTAAACAAAATGGTAAGAGTT GGTATTGGGAAATGATGCATATACTTGATGTATTTGGTAGTTCTAATTGTTTTCATTTGGTTGAGG BLAST |
Tissue | flowers |
Gene name | LI_gene_71826; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_58030
Blastp | Ubiquitin carboxyl-terminal hydrolase 14 from Arabidopsis with 76.16% of identity |
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Blastx | Ubiquitin carboxyl-terminal hydrolase 14 from Arabidopsis with 76.16% of identity |
Eggnog | ubiquitin carboxyl-terminal hydrolase(COG5207) |
Kegg | Link to kegg annotations (AT3G20630) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442658.1) |
Pfam | Ubiquitin carboxyl-terminal hydrolase (PF00443.28) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |