Ll_transcript_56080

• Id Trinity: FTRINITY_DN57812_c2_g1_i6
• Name Transcript: Ll_transcript_56080
• Sequence: CAAAACCACACGTGCTCTTCCTATGTGATGTCTTTTACAATTTAACGGCTCAAACTATTTTGCCATTTTCACAATATCACTCACAATTTTTTGCTTTACC AAGTACCTCCTTCATAATAATTCATCACTCACCCTATTTCAATTTTCTAAGTTTTCATTTTATTCTTTTTGTTTTTCCCCCTCCTGGCATAAATTTCTCT TGGTTTTCTCAACCATATTGTTCTTATGTTTCAATAGTGTTTCGATTTTTCTTTGTTCCGCCCAGAATTTTTCCCAATTTCGTGGCTTTTCGAGTGCATT AAATTGGTGCTGCATTAGCTCGAATTTGAGACCTGTGAGCTGAACAAGTTTACATGCTGCGATGAAGTGTGGTGATTGGAAGGTATTCTAAGTGTAGTAC TCTGAATTGGAGGTGAAATGTTCATTCAAAGCATGGGTTCTGCAAGAGATGTGGGTGGTGCTTCAGGGATAGTGCTAATTCCGATGCGGTTTGTGTGGCC ATATGGAGGAAGGAGTGTGTTCCTCAGTGGTTCTTTCACACGGTGGTCTGAGCTTCTACCGATGTCACCAGTTGAAGGTTGCCCCTCTGTATTTCAAGTT GTTTATAGCGTGCCCCCTGGTTGTCATCAGTACAAGTTTTTTGTTGATAGAGAATGGAGGCATGATGAACATCAACCTTATGTATCTGGAGAATATGGGA TAGTCAACACTGTCTTCTTGGCTACGGATCCTAACTACATACCTGTTATAACTCCAGAGATTGCTTCTGGAAATAATATGGACGTGGATAATGAGGCTTT TCGTCGAACGGTCCGCTTGACAGATGGTACATTGAGTGAGTTGCTGCCTAGAATATCAGATGCCGATGTACAAATCTCCCGTCAGCGTATTTCTGCATTT CTGTCTGTGCACACAGCTTATGAATTACTTCCTGAGTCAGGCAAGGTTGTTGCCTTGGATATTGAACTGCCAGTGAAACAGGCATTTCATATACTGCATG AGCAGGGAATTTATGTGGCTCCTCTTTGGGATTTCTGCCAGGGGCAATTTGTTGGTGTTCTCAGTGCTTCAGATTTTATTTTAATTTTAAGAGAGGTATA TGTTTTGGATTTTTATTTTTATTTTAATGGAGGCATGCTAAGTTTAAGATCGTCTCTTTGTATTGGCAAGATTTTTTAATGCAAAGTTCTTCTAATGAGT AATGATTGCTTATGTGACATCAGGTAACTTAGAAAGGCAACAAGAGGAAAAGGAAAATTGAGTATGAAAACTAAATAAAATTTATTGCATGATTATAGTG TTTTTAATTCTTGAAAGGTTGGTAAGTTGCTCCCCATTCTAACCAAGCAGTTTACTTGTCTGCATGAGGTGTCTGATGAAATCAACTTCTTGCTTGGAAT AATGAAATGTATCCTTCAGCTTTGACTCTTGACGAGTTCCGTCAATGGTTGGCGGGCAACAATTGTTAGTCAATATACAAATAATCACTTTCATGTGAGA ACAATTGGTACTCAATATATATATAGGAAGCGAATCACTTGAAAATAATTGTTATCGTGAGAAATAAAAACAATTAATATGAACCATTGGATCTTACTTA AATGGTCAAGATTTAAAGATAAATGCACATGACTTTTTTAAGTGATCGTGTTACCAATAACTAACTTCTAATCTTAACCATCCATGTATGGTTGTAAGGC CTAGATTTATTGTTCTAACAGTTTTTATATGAGAACTTTTCTCATTTGACTCACTCCCTATATGTATATGACCATATAAGAAAAAATCAATTGACTCTAC ATATTGTTTGCTTAAACAGCTCTGACATATTATTGTGACAGTTTTTTCTATCTCAAGTTATTTTCTGTTGACTATGGATACGATGAATCATTTCGTAAGA GGTCTCTTTGAATTTGAGCTCTTTTTTTTAAGATCCTAAAGGGAATCATGGGTCTAATCTGACAGAGGAGGATCTTGAAAAACTTACTATATCATCTTGG AGAGAAGGGAAACCATATCTAAATAGACAGAATAATGACCACAGAACTGTATTTTCAAGGGGAAAATCATATCTAACTTGTTTTTTATATCTCAAGTTAT TTGCTGTTGATTATGGATACAATGAATCATTTCATAAGAGGCCTCTTTGAATTTGAGCTCTTTTTTTGAAGATCCTAAACAGATTGATGAACATGGATAA GTTACTTAACGATGGATGGAGTCAATTTTAATTTTACATTTCTGTATTGTTTGTTAAGAAGAAAGAAAAGTGTTTCTGTTAACTTACATGAGTTGATGTT GGGGATTAGTTGAATATGCAGCTTTGATTCCTCTTCAGCTTTGTGGACCACTAGCGATTATAATATTTTACAAGTTTACCTGTAAAGTTTTTCTTTCTTC ATATTTATTTTGCAATGCTTATTGAAACTTGTTTTTGTCCTATTCTCAGTTAGGGAACCATGGGTCTAATCTGACAGAGGAAGAGCTTGAAACACATACT ATATCAGCTTGGAAAGAAGGAAAATCATATTCAAATAGCCAGAATAATGGTCGGGGAACTGTATTTTCAAGAGGTTTTATCCATGCAGGACCATATGACA ACCTGAATGCTATTGCCATGAAGATCTTGCAAAAGGGGGTTTCAATTGTTCCTATTGTCCATTCATCTTCCGAGGATGGTTCATTTCCACAGTTACTACA TCTCACTTCACTTTCAGGAATATTGAAATGCATTTGCAGGTATTTTAGGCATTGTCCTAGTTCATTGCCTATACTTCAACTTCCAATTTGTGCAATACCT GTGGGCACTTGGGTGCCCAAAATTGGGGAATCAAATCGGCGGCCTCTAGCAATGTTGAGACCAAGTGCTTCTCTTGCTTCAGCCCTAAATTTATTAGTCC AAGGCTGATGGTAGAGGGAGCTTTCTCCCACTTTGAGAAGAATGTTGATTTCTGCGTGTGATTAGTCATCCAAACAGAGCATGAATTTAGGGGCCCAAGT AAGTTCAATACCAATCGTTGACGATAATGACTCATTGGTGGATATATATTGTCGGAGTGATATAACAGCTTTGGCGAAAGATAGAGCATATACACATATT AATCTTGATGAA
• Tissue: flowers
• Gene name: LI_gene_71858;
• Additional information: details;

Expression of Ll_transcript_56080

FPKM

• FPAB: 0.2
• FPNAB: 0.1
• LF1: 0.1
• LF2: 0.1
• LF3: 0.2
• LF4: 0.1
• UF1: 0
• UF2: 0.1
• UF3: 0.3
• UF4: 0.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_56080

• Blastp: Sucrose nonfermenting 4-like protein from Arabidopsis with 62.72% of identity
• Blastx: Sucrose nonfermenting 4-like protein from Arabidopsis with 62.72% of identity
• Eggnog: Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth (By similarity)(COG0517)
• Kegg: Link to kegg annotations (AT1G09020)
• CantataDB: Link to cantataDB annotations (CNT0002298)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019419613.1)
• Pfam: Glycogen recognition site of AMP-activated protein kinase (PF16561.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;