Ll_transcript_58456

• Id Trinity: FTRINITY_DN57815_c1_g1_i2
• Name Transcript: Ll_transcript_58456
• Sequence: AAAAGATTATTCTCTCCTTAATCGATGTGGATGAAACAAAAGAAAAGAAAATAGGAATTTTTTAAAAAAGGTAATTTAATATGAAGGTAACAAATATCTT GTATCATAGGTTATTGAGGCACGACCCAAGTTGAAAATATCTAACAACCAATATTATCCTTCACACACACCAAAACAGAGCGAGGTGGAAGTTTAAAAAG CCATACATTCATTCTCATACAAGTGCTAGCCACCCTTATCCTCTAGCCCCTTCTTTCTCTATAAGGTTTTTTCACCTTAAACCTCTTCCCTTCACAAAAT GGCTTCTATCATTGGCGTTTCTTCCATTTACCAAACCCCTTCTCTCGAACTCCTTAAACGACAACAAACTAACCCCTCCGTTTCACTAAAACCATTGTCG TTTGACAACAAGTCTCACTTCAACACTGTTCTCAGAGCACACCTCAATAACCGAACACTTTCTGCTATTGCTACCAACAATTCTTCTGTTCTCAGTGAAG AAGCATTCAATGGCCTTGGGTTTGGTGATGTCACTGGTGACGATGATGAGTTGCGAGGATTTGATTATGAAAATGGAAATCCTTCTTCTGTTACTGTTAG TAAAGATGAACTCGATGTTTCTAAGTTGGATTTGCCTTCCAAACTTATACAATCGCTCAATAAACGTGGAATTACTCACCTTTTTCCTATTCAGGTCTTT TCTCGACTTCGCCCTCCTTGTTTTTTAATTCAATTACATAACTATTTCTAATAATACATGTCCTAAATAATTCATTAGGTGATAAAGTCCAATTATAATT ACTAGTTTTCACTACTAAAATCTACGCAAAACCTTGTGTAAGAGTTTTATATACTGTTACTATGTTATCATAAAGTAATACAAATTAATGGTGTATGATG TATTGAATGTGTATACATATTACACTCTTAGTTCACTTCCTATTACTTATCTCTCAGTTTTACAAATATTTGAAATTACTAAGAGTTTAGTTTCGGTGCA ATGCGAGTGTAAGTATTTTTATACTATCAACCAATCATAGTATATTAGTATCGTACAGTAACATGTGTCTGGCTTTTGAGGCATCAAATATTTTTACTGA CGGTGGTAGTGCATGATTGGTTGGCAATGTAAAAATCTTTAACCCTGGCAAAGGATTAAAATTAAATCCAATTGCTAATATATTGTGTATGCTCCTTCTT CTGGTAATTTGAAGGTAAATATATGTTTCGATGGTTAGTTATGCTTACATCGTGGCCTGATGTTGACTTATTTTGATTGGTGCGTCTGCAATTGTTGTGT GATGCCATTATGGTGGGCACCACACAGAGGTGTTGCAACCGTATCGAATGATGTACACAGTGTGGCTATTTAAAACATTTATATATGGGTTTAAGTTCCC GTTATTATCTATGCACTATGCGATTATCTTTGTTGCTACTGTTGATGTTTATTTGTCTAATGTGTACAAATTCCTTTTTTATCGCAACTTTAACCTCTCT TTTTTGTGTTGGTTAGAGAGCTGTGCTATTGCCCGCACTAGAAGGTAAAGATATTATTGCTCGGGCAAAGACTGGAACTGGAAAGACATTAGCGTTTGGA ATTCCGATTCTTAAAGGCCTCAGTGATGATGACCGCAATTCTCTGAGGCGTGGTCGCCTTCCGAAAGCATTGGTCCTTGCACCTACTAGGGAGTTGGCAA AACAAGTCGAGAAAGAGATAAATGAATCTGCACCATATCTGAACACAGTTTGTGTCTATGGTGGTGTTTCCTATGTAACACAGCAAAGTTCACTATCACG TGGAGTTGATGTAGTGGTTGGTACACCTGGTAGAATAATTGACCTAATAAATGGGAACAGCCTCAAACTGAATGAAATTGAGTATTTAGTCCTCGATGAA GCTGACCGTATGCTTGCTGTTGGATTTGAGGAGGATGTAGAAACAATTTTACAGACTGTCCCAGCTGAGCGGCAGACCATGCTTTTTTTCTGCAACCATG CCAGGTTGGGTGCAGAAACTGTCAAGAAAATATTTGAAGAAACCATTGACAATTGATTTGGTTGGTGATGAAGAAGAAAAGCTAGCTGAAGGGATCAAGC TTTATGCTATGTCAGCCACCTCTACTTCAAAGAGGACAGTTCTTTCTGATCTTGTAACCGTTTATGCAAAGGGTGGGAAGACTATTGTTTTCACGCAGAC AAAAAAAGATGCTGATGAAGTATCATTGTCCTTAACAAATATTATATCTTCTGAAGCACTGCATGGTGATATATCTCAGCATCAGAGAGAGAGAACATTG AATGGTTTCCGGCAAGGGAAATTCACAGTGCTGGTTGCCACTGATGTCGCATCTCGTGGACTTGATATTCCCAATGTTGATTTGGTTATCCATTATGAAC TTCCCAATGATCCTGAGACTTTTGTACACCGCTCTGGTCGTACTGGGCGTGCAGGAAAACTAGGTACTGCCATTCTGATGTACACCAGTAGCCAGAGGAG AACAGTTAGATCACTTGAGCGTGATGTCGGCTGCAAATTTGAATTTATTAGTCCACCAGCAATAGGAGAGATTTTGGAGGCATCCGCCCAGCAAGTTGTT GCTACACTTAAACTTGTTCATCCCGAGTCTATTGAGTTCTTCATGCCAACCGCACAAAAACTGGTTGAAGAACAAGGAGTAAATGCCCTTGCAGCTGCAC TAGCACAGCTGAGTGGATTCTCTCGACCTCCGTCATCCCGGTCTCTTATCAACCATGAACAGGGATGGGTTACATTACAACTGACTCGAGATGGAGATAA CTCTAGAAGATTTCTTTCTGCAAGATCAGTAACTGGGTTTTTGTCTGATGTTTATTCTCCAGCTGCTGATGAAGTTGGAAAAATACACTTAATTGCAGAT GAAAAGATTCAAGGAGCTGTTTTTGATCTTCCGGAGGAGATTGCAAAAGAGTTACTCACTAAGGAGGTACCACCAGGCAACACTATTTCCAAGATCACCA AGTTACCTCCTTTGCAAGATGATGGACCTGCAAGTGATTTCTATGGGAGGTTCTCTGACGACAGAGAACAAGGAAGTTCTAGAAATCAGAGAGGAGGTTT TAGGAGCTCACGATCATGGGGAGGTAGTGGCCGGAACTCTGACGATGACTTTGGTGATTCATATGGGAGAGGTGGTGGTAGAAGTTACAGATCTGGCAAC AACAGGTCTCAATCGAGGAGAAGTGGTGGGGATGACTGGCTGATTGGAGGTAGAGGATCAAGCAGGTCTTCATCAAACAGAGGTGGCTATGGAGGAGGGA GCTACGGTGGAGGGGCCGGGGCCTGTTTTAATTGTGGACAATCTGGCCATAGGGCAGCAGAATGTCCCAAGAAGAGAGACTTTTTCTAGTTTATACATCT TGAAATTTGATGCCACCTTGTTCAAGGCTTGAGCTGCTACCATTGGT
• Tissue: flowers
• Gene name: LI_gene_71868;
• Additional information: details;

Expression of Ll_transcript_58456

FPKM

• FPAB: 0.3
• FPNAB: 0.1
• LF1: 0.1
• LF2: 0.2
• LF3: 0.2
• LF4: 0.2
• UF1: 0
• UF2: 0.1
• UF3: 0.3
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_58456

• Blastp: DEAD-box ATP-dependent RNA helicase 3B, chloroplastic from Zea with 65.85% of identity
• Blastx: DEAD-box ATP-dependent RNA helicase 3, chloroplastic from Oryza sativa with 80.78% of identity
• Eggnog: -
• Kegg: Link to kegg annotations (100191761)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019427577.1)
• Pfam: Helicase conserved C-terminal domain (PF00271.30)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;