| Id Trinity | FTRINITY_DN57815_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_58457 |
| Sequence | CTCACACAAGTGCTAGAGCCTTATCCCCTAGCCGCTTCTTTCTCTCTGAGGTTTTTGCTCTTTAAACCTCTTCTTCACCAAAATGGCTTCTTCAATCATA GGCGTTTCTTCCATTTACCAAACCCCTTCTCTTCAACGACAACAACAAAGAAACCCTTCCGTTTCATTGAAACCATTGTCGTTTCACAACAACATCAACA ACGATAACTCCCACTTCAACACTCTTCTCAGAGCTCACCTTTATAATCGCAGAATTTCTGCCATTGCTACCAACAATTCTTCCTTACTCGCTGAAGAAGC GCTTCATGGATTAGGCTTTGATGATGTCACTGATGATAACGATGATTTTGATAGTTTTGATTTTGAGAATGAAAATGAAAACCCTCCTGCGACTATTAGC ACCGATGAGCTTGATGTTTCTAAGCTGGATTTGCCTTCGCGACTCGTGGAATCGCTTAAGAAACGTGGAATCACTCACCTTTTCCCTATTCAGAGAGCTG TGCTAGTCCCTGCACTAGAAGGTAGAGATATCATTGCTCGGGCAAAGACAGGGACTGGCAAGACATTAGCATTTGGAATTCCAATTCTTAAAGGCCTCAC TGATGATGACCAGAATCCTATAAGGCGTGGTCGTCTTCCTAAAGCATTGGTCCTTGCGCCTACTAGGGAGTTAGCAAAACAAGTAGAGAAAGAGATCAAT GAATCTGCACCTTATCTGCACACAGTTTGTGTTTATGGTGGTGTTTCCTATGTAACTCAGCAAAGTGCACTTTCGCGTGGTGTTGATGTAGTAGTTGGAA CACCTGGTAGAATAATTGACCTGATAAATGGTAACACCCTTAAACTGAGTGAAGTTCAGTATTTGGTCCTCGACGAAGCTGATCAAATGCTTGCTGTTGG GTTTGAGGAGGATGTGGAAGTGATTTTAGAAAAGCTACCATCGAAGAGGCAGAGCATGCTTTTTTCCGCAACAATGCCAGCGTGGGTGAAGAAATTGGCT AGAAAATATTTGGATAAACCATTGACAATTGATTTGGTTGGTGATGAAGACGAAAAGCTCGCTGAAGGGATAAAACTTTATGCTATATTAGCCACCGGCT CGTCAAAACGGACAATTCTTTCTGATCTTATAACCGTTTATGCAAAGGGTGGGAAGACTATAGTTTTTACGCGTACAAAAAAAGATGCTGATGAAGTATC ATTGTCATTAACAAATAGTGTAACTTCTGAAGCACTGCATGGTGATATATCTCAGCATCAAAGAGAGAGAACATTAAATGGTTTTCGGCAAGGGAAATTC ACAGTGCTTGTTGCCACTGATGTTGCAGCTCGTGGACTTGATATTCCCAATGTTGATTTGATCATCCATTATGAGCTTCCCAATGATCCTGAAACTTTCG TACATCGCTCTGGTCGTACCGGGCGTGCAGGAAAAGAAGGTAATGCCATCCTGTTGTATACCAGTAGCCAGAGGAGAACAGTTAGATCCCTCGAGCATGA TGTAGGCTGCAAATTCGAGTTTGTTAGTCCACCAGCTATGGAAGAGATTTTGGAGTCATCTGCTAAGCATGTTGTTGCCGCACTTAATGGAGTTCATCCC GAGTCTGTTACATTTTTCACCCCAACTGCCGAAAGATTGATTGAAGAACAAGGAACAAGTGCCCTTGCAGCTGCACTAGCACAGCTGAGTGGATTTTCTC GACCTCCATCATCCCGGTCTCTTATCAACCATGAACAGGGATGGGTAACATTACAACTGACTCGAGATGGCGATAACTCTAGAAGATTTCTTTCTGCAAG ATCAGTAACTGGGTTTTTGTCTGATGTTTATTCTCCAGCTGCTGATGAAGTTGGAAAAATACACTTAATTGCAGATGAAAAGATTCAAGGAGCTGTTTTT GATCTTCCGGAGGAGATTGCAAAAGAGTTACTCACTAAGGAGGTACCACCAGGCAACACTATTTCCAAGATCACCAAGTTACCTCCTTTGCAAGATGATG GACCTGCAAGTGATTTCTATGGGAGGTTCTCTGACGACAGAGAACAAGGAAGTTCTAGAAATCAGAGAGGAGGTTTTAGGAGCTCACGATCATGGGGAGG TAGTGGCCGGAACTCTGACGATGACTTTGGTGATTCATATGGGAGAGGTGGTGGTAGAAGTTACAGATCTGGCAACAACAGGTCTCAATCGAGGAGAAGT GGTGGGGATGACTGGCTGATTGGAGGTAGAGGATCAAGCAGGTCTTCATCAAACAGAGGTGGCTATGGAGGAGGGAGCTACGGTGGAGGGGCCGGGGCCT GTTTTAATTGTGGACAATCTGGCCATAGGGCAGCAGAATGTCCCAAGAAGAGAGACTTTTTCTAGTTTATACATCTTGAAATTTGATGCCACCTTGTTCA AGGCTTGAGCTGCTACCATTGGT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71868; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_58457
| Blastp | DEAD-box ATP-dependent RNA helicase 3B, chloroplastic from Zea with 66.21% of identity |
|---|---|
| Blastx | DEAD-box ATP-dependent RNA helicase 3, chloroplastic from Arabidopsis with 71.92% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (100191761) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019452324.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |