| Id Trinity | FTRINITY_DN57823_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_56218 |
| Sequence | CAGATTGAAATGGGAGATTTTCTCATTGGAGGTCTTTCAACAGGTAACTGTATCGTTCCTCAACAATATGACACTCTTTATGATTCCGAAGTGTACCTAA TTCTGAAATATATTAATGTTATTCTTAGGTGTTTGCGGGGGTGGCTGTGCTGTTATTGTGGACTCCGGAACATCTTTGCTTGCTGGTCCAACTGTATGTT CTTCAATCTTTTACGGGGGAAATTTCTTATTGATTATTTGCTTTGAGGTTAAGGAAGACCATCAACAACTCTAAGCGAAAAATATTAGAAAGGGTTTAGA TCCAATCATCCAAATGGTCTCTTGGAAGATTTGCTTTTTGGCAGAACACGACTTTGTCGTTTGATCTATATAATCGACCTGACCTAGTGTGAAAAAGCCT TTGGTTATTATAGATTTTCATCAATGATCTTTGTTGATTCTCAATTAATTTCAGCCTGTTGTTGCTGAAATCAACCATGCTATTGGAGCCGAGGGAGTTC TCAGCGTAGAATGTAAGGATGTCGTTTCTCAATACGGAGAGTTGATATGGGATCTCTTAGTATCAGGGGTGAAACCTGCCGACGTATGTTCGCAAGCTGG ATTATGCGCTTTCAAGAAGGACCTATCTGAGAGCGCTGGAATTGAGATGGTAACCGAAAAGGAGACAGAGTCGAAAACTAGAGGAGATACTCCTTTGTGT TCATCTTGTCAAATGCTTGTGATTTGGATCCAGAATCAACTAAGGCAAAAGAACACTAAGGAAAGAGTGTTCAGCTATGTGAACCAACTATGTGAGAGCC TGCCAAGTCCGGCTGGAGAGTCGGTGATAAGCTGCGATAGTCTTTCTCGGATGCCAAACATTACGTTCACTATCGGAGATAAACCTTTTGTCCTTACACC AGACCAGTATATTCTGAGAACTGGAGAAGGCATCGCAGAAGTTTGCCTTAGTGGGTTTATTGCTCTTGATGTTCCTGCTCCACGAGGCCCACTCTGGATT CTTGGTGATGTTTTCATGAGGGTATATCACACAGTGTTTGATTATGAGAATGCCCAAGTTGGTTTTGCCATAGCTGCCTAAACTCACTTCCAAAGAAGAC TCTGTATTTTAATAAGTGTTGTGTAAAGAAGCTGTTATTATAAGCTATAAATACTAATACTCAGGTTCAGTCTGTGTATTCATAAATGTATTTACTTATG CATTTGAAAGTATAGACTTGGAAGTGTTGCATGTGTTTACATTGAAGACCCATGTTTATAATCTTCTTTGTAAACCAGTATTTATACCTTTCTTTTCCTA TTATAATTTTACTATATACTTTAAATGTGGTATACTAATGTGGGTGGCAATAGAATGCATGAACTTCATCCACTTAACTTCTATAGTCCACCAGGCTTTA ACATGTGGTCACTTTATGTACAATATAGTTACTGAAGTGAGAACATTTCTCATATAAGGTAGTTATTGATCACATAGTAATCATGTATATATATCTTTTA ATCTTAACCATTCTATCGAGATCCAATAGTTCATATCTGTTCTCATTTCATATTATAGTGTATTGTTCTTATGTAAGTAATATATAAACACATTGTTCTT AGGTGGTGCCCTGTATATTTGTATATGTATAAACATAATATAGATATACTCACTAAAGTTTGGGATCCTTAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71921; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56218
| Blastp | Aspartic proteinase oryzasin-1 from Oryza sativa with 55.56% of identity |
|---|---|
| Blastx | Aspartic proteinase from Oryza sativa with 56.52% of identity |
| Eggnog | aspartic(ENOG410XNV7) |
| Kegg | Link to kegg annotations (4339639) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419261.1) |
| Pfam | Saposin-like type B, region 1 (PF05184.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |