Ll_transcript_56225

• Id Trinity: FTRINITY_DN57823_c1_g1_i7
• Name Transcript: Ll_transcript_56225
• Sequence: TGTTATCGTCAAGAATCAGGATTTCATCGAGGCTACCCGAGAAGGAAGTCTTTCCTTTTTGGCAGGGAAGTTTGACGGAATACTCGGGCTTGGCTTTCAG GAGATCTCAGTTGAAGATGCTGTACCACTATGGTACAATCTTGTAGAACAAAATCTCGTAAGTAAGAAGGTGTTCTCTTTTTGGCTCAACGCGGATCCAA ATGCGAAGAAGGGTGGTGAACTAGTATTCGGCGGTGTTGACTCAAAGCACTTCAAAGGAGAACACACTTATGTTCCGGTTACAAGAAAAGGTTACTGGCA GGTTAGCGAAACAACAATTTGTTTAATCAATAATTCCTTTAAATTTTGTAATAATTCGGTTCGGGAAATCATTACAAGAAAATTTATTTTTCAGATTGAA ATGGGAGATTTTCTCATTGGAGGTCTTTCAACAGGTGTTTGTGAGGGTGGCTGTGCTGTTATTGTGGATTCAGGAACATCTTTGCTTGCCGGTCCAACTG TATGTGGTTCAATCTTTCGGTGAAGTTTTTCCTTATAGATTTTTTGCTTAGAGGTAGAAGGCCAACAACTCTTGCCGAAAGTGCGAAACCATTAGAAATG ATTTACATCCAAATGGTCTTTTGAAAGATTTGTTTTTTGACAGAACAATTGCATAGATTTTCGTTTATTATTTTTGTTGACTGTTGATTAATTCCAGCCT GTTATTGCTGAAATCAACCATGCTATCGGAGCTGAAGGAGTTCTAAGTGTAGAATGTAAGGATGTTGTTTCTCAATATGGAGAGTTGATATGGGATCTCT TAGTATCAGGGGTAAGTTTCCTTTCACTCTCTATAAAGAAATGTTTTAAAACCGGGAGATTGAACTGGCAAGACCTCCAGGTCATGGTTCAACTGATTAA GTTTATAGTTGCACCGTTATTGTCAGAATCACAGACACGGTGGTTCATGGTTTAGCTGCTTCAACCGACCATTTTAGTCTAGTTTTTAAAATACTGCTAT GAGTTTTCTATTCAGCATGTTTTCCGGCCCCCGATCTTTCTCATTTGCATTTCAACTCCTTGTATCTAAGTGAATTTGACCTTGATATCCAGGTAAAACC TGCTGACATATGTTCGCAAGTCGGGTTATGCTCATTCAAGAAGGATCTATCTAAGAGCGCTGGAATCGAGATGGTGACCGAAAAGGAGCAGGCAGAGTCA AAATCTAGAGGAGATGCTCCTTTGTGTTCATCTTGTCAAATGCTTGTGATTTGGATCCAGAATCAACTAAAACAAAAGGCAACAAAGGAAAGAGTATTCA GCTATGTGAACCAACTATGTGAGAGTCTTCCAAGTCCAGCTGGTGAGTCAGTGATAAGCTGTAATGGTCTTGCTCAGATGCCGAACATTACGTTCACTAT CGGAGACAAACCTTTTGTCCTCACACCGGATCAGTATATTCTGAGAACCGGAGAAGGCGTCACGGAAGTCTGCCTTAGCGGATTCATTGCTCTTGATGTT CCTGCTCCACGCGGTCCACTCTGGATTCTTGGTGATGTTTTCATGAGGGTATATCACACTGTCTTTGACTATGGAAATGCCCAAGTTGGTTTTGCCCTAT CTGCCTAACTAACTTCCAAAAGAGACTGCATTTTAATGATTGTGTTGTAAAGAAGCTTCTATAACCTACAACTAGTATTATTACTCAGGCTCACTCTATG TATTCACATGTGTATTTATTTATGCACTTGAAACTTGAAAGTACACACTTGGAAGTGTTGCATGTGTTTATTAAAGACCAATGTTCATATCCTTCTGTGT TAATCTGTATTTATATTCTGTTTTCCCCCTTCTTATTTACTATAACTTTATCCATCTAGCTAGCTTCTCTCGCCGAAAATGTTCTTTTTTTTTCTTCGTA TAATCAAGAGTATCCATTCACCTTTTTTGGTCCATTAGGCTTTAACATGTAATGAAAAGATATATTATATATTATATATGCATTGATTAAGCCAAAAAAA
• Tissue: flowers
• Gene name: LI_gene_71921;
• Additional information: details;

Expression of Ll_transcript_56225

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0
• LF2: 0
• LF3: 0.3
• LF4: 0
• UF1: 0.2
• UF2: 0.3
• UF3: 0.3
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_56225

• Blastp: Aspartic proteinase from Oryza sativa with 56.29% of identity
• Blastx: Aspartic proteinase oryzasin-1 from Oryza sativa with 55.81% of identity
• Eggnog: aspartic(ENOG410XNV7)
• Kegg: -
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440635.1)
• Pfam: Eukaryotic aspartyl protease (PF00026.22)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;