| Id Trinity | FTRINITY_DN57824_c0_g2_i18 |
|---|---|
| Name Transcript | Ll_transcript_57760 |
| Sequence | AGCAAATTCTGCCTTTCTCACTCTTGTTGTTCGTTGTTTTCATCCGTCAGCATTTGCAAGGTATAATCCCTTTGTTTGCTTTTTATTAGTACATTCATTG TCAAAATATTGAGATAATTGTTTCTGATGTATATAGTATATGATAGACTTTCATAATATTTCCATACCAAGCCAATCACTAATTTGTTTAGGGTGTGTTT TTCTTCATGATGTTCTTAATAGTTTTGTGTCCATAGTACTTGGTTGCCTGTTTTGTTTGGGACCCCTGGTTGTTTGTTTTTAAGGATTGTGCTTGGTGGA ATAACGGTATGACAAAGAAAGGCTGCTTGACTTTGGGAGTGATGCAAACTATGGAAGTAGCATAACATCTTTACTTTCCATCCCTTTTTAATTCATTTTG GTCATTGCTAAGTGTTAAACAATACTCAATACTTCATGTTATCCGTGAGGGAAGGGTGTAGAGGAAAAGAAAAGATTACCTCATAATTTTTTTGATGATC ACACAGATTGTGCTTTTCTTTTCTTTACTTATTCTCCATTTGGCAGTGTCTTACATTTGTAAGGAAATTACAGCTTTGCTAATTGTAAGAAAGGTAAAGA TTTATTTTCCAGACTTAATAAAACACTGCTTTCTATATGCATTGTTAGTTGCGATAGTGTCTTTAATTTTTTGCAACCGCTTCCTCTCTTCCTCCATTCG ATCCATGTAGCAGACCCCACCTAGTTGGCCTAAGGCTTGGTTGTTGTTGTTGATTCTTTCCATATTGCTTGGTGATATTCACTTCAAGAACTTGCAGGTT TCTTTGTCACAATTTGGATATCAGCTGTGATGTTCAAGTCAAATGAAATTGTTAAGAGGCAGACAGCTTTAAAGGGAGATAGGAGAGTATCTATCCTTGC TGGTGTCTCAGTTGCCTTCATGCTTCATGTGATTTGCATTTACTGGTGGTATCAAAATGATGACCTTTTATACCCGCTTGTCATGATTCCTCCAAATGCA ACACCTTTCTGGCATTCAATATTCATCATTTTGGTTAATGGTATGGACTTATTTTGTGTATGGATGATCATTTATTACATTGTTACAATGCATTTAAATT TTAAACTGGACCTTTTGTTTGCTCTAATTTAAATGTGACTCCAGTACGTGAATACGTGATCAATATAGAAAGCACCTTATAAATATAATTATGCAGTGTA GGTGAAATGCTTAATACTTGACTTATAGATGCAATGAGTTTTGAAGTTTCAGCACTCTATTGCAGCTGTTTGTTTGATCACCAATGATGAATTCAAAGCC TTTCTTTTTTTGTTTCATAACTCAGTACCATTTTGAAACATTTTATCGTTTAAATCATTTATAATATGTGGATGTGGTACAGTGAAAATTAATTACCAGG CAGGAATGCAGCATATAATTGAATTTAAGTTGCTTCAGGATAAAGGTAATAGTTAGTTTCCTTTGCATGATATCAGCTGGCATTTCTTGACTGCCGGTGT AATCTACATCTCAGTACAACCAATGGAAGAAGTTGGTGTTGTCTGAAATCGTGTTTTAGATATTGAATTGTGTTGGGAGCCATGATCTCAAGATCTCAAC TATCAAGTTCTTATGTACACAAACTTTCTGCCCTGCTGATAAACTATTTAAATAAGTGCTTCTATCACAAATGAATCTCAGATTCACACTTGCAGAAATT TGAAATAGCTCATTCTAAAAGATATGCGATTATGCGTATAAGTAGGATTGGTAAAGTCACATACTCACATGAATTGAGGATAAAATCTGTTGCCAGTTTA GTTTCAATGTTTCTCTTGATTAAATCTATTTTGATATTATTTATGTTTTCCGCATTGATCCAAGATCTGAGTCTTCCAGCATGTGCATAATTGAGTTTCT TTCAGTGTTCCATTAGATACTCAATATTTACCCAAACTGGTTGTTAGCATTATTTTTTGGTAGTTTGTAATTTTGTTTTGGAAACATTTTTTTAACACCA TTTATTTGATTCAGCATTTGTTTGATACTGATAATGAGAAGTATCTTTCTGTATCTCTTTTTAGCTATGTCAATATGTTTTTATTGTCTTAGATTCTTAT TTGATTGATTCTTTGTGTTACATCTTGATCTACCCACTTATATTCTACTTTTGTGACCCTTAGCCATTCTAATTTTTGTTGGTATTATGGTCACAATATA TATTGAATCAGATACATTGGTGCGGCAAGCAGCAATGGCTCTCAAGTGTTTTCTGCTTATATATTACAAAACTGGCAGAGGTCATAACTTCCGTCGGCAG GCTCAAATGTTGACTCTTGTTGAGTACACATTGTTGTTATATCGTGCCCTGTTGCCAACACCAGTTTGGTACCGGTTTTTCCTGAACAAGGATTATGGCA GTCTCTTCTCGTCATTGACAACTGGGTTGTATTTAACTTTCAAGCTAACATCTTTTGTTGAGAAGGTTAAATGCTTTTTTTCTGCCGTGAAAGCATTATC AAGAAAGGATGTTAACTATGGAGTTTGTGCCACAATGGAACAGGTTAATGCTGCTGGTGACCTTTGTGCTATATGTCAGGAGAAGATGCATGCCCCCATC TTGTTGCGCTGTAAACACATTTTTTGCGAAGAGTGTGTATCAGAATGGTTTGAGAGAGAAAGGACTTGCCCACTATGTAGAGCATTGGTAAGACCTGCTG ATCTGAAAACCTTTGGAGATGGATCTACAAGTCTACTTTTCCAATTGTTTTAAACTCGTGTTCTTTGAGTTTGAGCATAGTTCTGTGCCAAACTTCTACA TGAAAAGTATCATGTTTAGTACTCACTGATTTGGTAAAGATTTTTCATCAATAGGTTCCTAAGAAATGAGTCTGAAGGAAATCATCTAACATATACAGCA TACAAGTTATTTTATTGTATTGATATTACATATACAAACCTGGCATTCCTCATGTCTTAGGGAAATATGGTGAACACAAATTTGTTCATATTATTACATC CTTTTGCAATTCATCTCAAAATTTGGCTTAAAATTTGCAAGTGCTGAAATTGCTACTTATTACAGGTAATTTGGATTTGGATGCTTTTTGTCTGTGATAT TTAGACATACTTATTATATAGTTTTGTTTTAGTTGATATATACAAAATGATAAACAAGAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71929; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_57760
| Blastp | RING finger and transmembrane domain-containing protein 2 from Homo with 34.43% of identity |
|---|---|
| Blastx | RING finger and transmembrane domain-containing protein 2 from Homo with 34.43% of identity |
| Eggnog | Ring finger protein, transmembrane(ENOG4111HH8) |
| Kegg | Link to kegg annotations (84900) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431458.1) |
| Pfam | Zinc finger, C3HC4 type (RING finger) (PF13920.5) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |