Id Trinity | FTRINITY_DN57831_c1_g1_i10 |
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Name Transcript | Ll_transcript_58747 |
Sequence | AAATAAACCATTTTTTATTCTCTCTCGCGCTTTTTACTTGTTCCGCTCTGCAGTGCACCGATAACTAGAATAGTCCTACCATATTATACTCTTAAAATTA CCTTTGCTTACTTGTAAAAAAAAATAAAAAAGGTGGTAAATTTATATTCACCACTTTACCAATTTATATTGTGATGGACAATTCAGTTATTCTGTATGAG ATGGATAATAGATTAATAGAGATAGAAAGCAAGTTGAAGTGGAGAAGGGAGAGATAGAGAGAAGAAAAGAAGCAATGGGGTTGTTGTTTTGAGTGAGGAA GGGATCTGATATTTCATATTCATTTCATTTTCATTGAATTCTCAACTCTCAAAATAGCTTTTTGGGTAACACTCAAGGGAGGTTGAAGATAAAAAGAAGG ACCCCATTGGAAACTACTTAAAACTTAAAAGCAAGGGAGAAAGTTAAGGTATTGATTTTTGTTCGTGTTTGTAAAAAGCTTGTTTTAATTGTTGTGCCAA CCTTTCCCATTCCAACCATTGAAAAATTGATTTTGTCTGTACTGAGCTATTATCTTTTTATTTTCCACACCACACACAAATTTCGTTTTCTGCTTGGTGG GGGCTCATAGGTTATGAAACAACATAAGTGTAAGTTTCATACACATAAAGTCAAGTAACCAGAAAAGGCTATCTCAGATCAGATTCACATCAAAATTTCC TTCTTATTTTCTCCTCTCATTTAATTCATTCAAACCCACAAACCAAAATTCCAACTTTAAACTTGAAACTGTGACCCTTTGAAGCAAAGTAAAGAAAAAC TCCTTTTTTTATAACTGGATTATTATATTGAGCTGGAGCCACTTCCAATTATATCACTCCGGAAATGAGAGCTGGACTAAGCACAATCCAACAAACGCTA ACGCCGGAAGCAGCAAATGTTCTCAACCAGTCAATCACGGAGGCTGGTCGCCGGAACCATAGTCAAACGACGCCGCTTCACGTGGCGGCGACACTTCTGT CATCCCCACCAGGTTACCTCCGTCAAGCGTGCATAAAATCTCACCCCAATTCCTCTCACCCTCTTCAGTGCAGAGCGTTGGAGCTCTGTTTCAGTGTTGC GCTTGAACGGTTACCAACTTCACAGAACACAAGCACTTCATCGGAGCCACCGATTTCAAATGCTCTTATGGCTGCTCTGAAGCGCGCTCAGGCTCACCAG CGCCGCGGTTACCCGGATCTGCAGCAACAGCCTCTCCTCGCCGTGAAAGTCGAGCTGGAACAGTTAATTATATCAATTCTTGATGATCCAAGTGTTAGCA GGGTCATGAGGGAAGCTAGTTTTTCTAGTCCTGCTGTTAAGGCAATGATCGAACAGTCATTGAATTCGGCACCTTCTAATTCGAATGGATTGGGGTTTCG GCCTGCTGCGATGACGATGTTGGCAGCGCAGCCACCAGGTAGGAGCTTATATTTGAATCCAAGGTTGCAACAGGTGATTGGTGGTGCAGGTGCAGGTCCA GGTTCAGGGCAATTGGGGCCGGGGCAAAGAGGCGAGGAAGTAAAAAAAATTGTTGATATATTGTTGAGGAGTAAGAAGAGGAACCCGATCTTAGTGGGTG AATCACAGCCAGAGGCTGCGATAAGAGAGGTTTTAGGGAAAATTGAAAATCAGGAGTTGGGAGAAGCAGGTTTCAGTTTTAGTAATCCTCATGTGATTCA TTTGGAGAAGGAGATTCCTACCGACAGAACACAGGTTCCAGCTAGGCTGAAAGAGTTGGGTGATTTGATTGAGGAACGGGTCGGTAAGTCGGGTGTTTTT GTGAATTTGGGTGACTTGAAATGGCTAGTTGAGCAGCCTGTTGGGTTTGGAGTTGGTAATTTGGGTAATAAGCAGCAACTGTCGGCTGTGGAGGCTGGGC GCTCTGCGGTTGCAGAGATGGCGAAATTGGTGGCCAAGTTTGGTGAGTCTGGTGCTGGTAGGCTTTGGTTATTAGGCACTGCAACTTGTGAGACTTATTT GAGATGTCAGGTTTACCATCCTTCTATGGAGAATGATTGGGATCTTCAGGTTGTGCCAATTACCACCAGAATACCTATGCCTGGAATGTTTCCAAGGCTT GGGAATAATGGCATCATTGGTACCTCACTTGAGTCTTTGTCCCCATTAAAGGCATTCTCAACTGCAGCAACCACTCCATCTAGGCATGCTTCTGAGAACA TAGCTCCTACTGTAGAGTCAACTTGTTGTCCGCAATGTATGTGGAACTGCGAGCAAGAAATAGCAGAGATGTTAAAAGAAAATGAGAAATCCGATTCTGA ATCCAAATCACAGGCAACTTGTCCGCCTCTTCCACAGTGGTTGCAGGTTGCTAGAACTAATAATGATAATGCCAAAGTAAAGGATCAGTCTCAGAGTAAA AGCCAAGATGTGAAAAAGAGGACTCAAGAATTGCAGAAGAAGTGGCATGATACCTGCTTAAATATACATCCTAAATTTCAACAACAAAACATGAGCTCAG ATAGGATTACTTCGACTTCATTCAACATGACTGGCCTGTACAATGTGAGTTTGATGAGGGGCCAAATTCAACCCAAAATACCTCCGAATAAAAATCTTGA AACCTCATTGCAATTGAGCACAAACTCGATTCCAGCCCAACCACTACCGGAACCAGTGATCAGTCTGCGACAAAATCCGGTAACAACAGAACTGGTCCTT GGGCAAACAAAGCCAGCTGATAGCATCCCAGAAGGAACACAAGATCAACCCATCAATGACTTGTTGGGCTGTTTGTCACAACAGAACGACAAGTTTGATG AATTACAGAACAAAAAGCTACTTCATGCTGATTCTTTCAAGAAGCTACTCAAAGGTCTGACTGAAAAGGTGTGGTGGCAGCATGATGCAGCATCTGCAGT GGCTACCACAGTGACCCAGTGTAAAGTGGGGAATGGAAAAAGACGCCAACTTGGAACGAAGGGTGACATGTGGTTACTGTTCTTGGGTCCTGACAGAATT GGCAAGCAGAAGATGGCAGCAGCTGTTGCTGAGCTGGTAAATGGGTCCAATCCAACAATAATATCTCTTGCACAATGGCATGGAGATGGTGACTCTGATG TTCCTCATATCCGTGGGAAAACAGTTCTTGATCGAATCGTAGAGGCTATAAGAAGGAACCCACATTCTATCGTCCTGCTTGAGGACATCGATGAAGCCAA TAGCCTTATTCGTGGAAGCATAAAAAGAGCCATGGAGCAAGGCCGGTTCCCTGATTCTCATGGCCGTGAAATTAGTCTCGGGAATGTAATTTTTATCCTA ACTGCAAATTGGTTGCCAGAGGATCTCAGGTACTTGTCAAATGGGAATTCACCCGTTGAAGAAAAGGTTGCAAATTTAGCAAAAGGAGGTTGGCAACTTA GGTTATCAGTGGCTAAGAAGGCATCGAAGCGAAGATCGGGTTGGTTATCTAGTGAAGACAGATCAGTGAAACCAAGAAAAGAGATGAATTCAGGTTTATC ATTTGATCTCAATGAAGCTGCTGATGCAAATGAAGAGGACAAAGCAGATGGGTCACTAAATTCAAGTGACCTCACAGTTGATCATGAGGACAATCATGTC ATTCATAATAATCGCTCGACCTCAATAATTCCACGTGACCTTCTGGATTCTGTAGATGATGCCATTGTCTTCAAGCCTTTGAATTTCGACTTCATTCGTC GCAATTTTGGCACAACCATAACCAAAAGGTTTTCCACTGTGGTTGGAAACAGAATCTCAATTGAAGTAAAAGAAGAAGCTCTTGAGAAAATTGCTAGTGG AATGTGGTTAGGCCAAACTAACATAGATGAATGGATGGAGAGAGTGTTGGTTCCTAGCTTCCACAAACTGAAGAAGAATTTCAATTCAAACACCAATCAC ATTGAGTCTTCTATGGTGGTTAGGCTTGAAGGTGATGGCTACTCCGATCGCCGGATCCGGGAAGAGTGGCTACCTGCTACGGTGAGAGTGGTGGCAGAAG AGTATTGAGGATCAAGTGAGAATATTCGTTTTTGGTTACAGAAATGTAAATAGACCACTTTGGCGGGGAAGGTAAAAGACCGTTAGTAGAAAAAGAAAAA CCGTTAGAAGTGAAAGGACTAGGGCCGTGTCCACATTTTACCTTTTTTTCTTAGACAAAAAATAATTAATTTTTCCGTTTATAAAACCTTTTTTTGTAAG CATAGGTATAATTATTAATTATATGGACAATGATATTTCTAAAATGAGGGTATTCTTATATTCTGTCTCCTTGATTTCATTTAGTAATCTTACTTAAACC AATACTATAAATTATATCCTTTGTTCAATACCGCAATTGTTCTGCGAGGAAACAATTTTGAAAGTTCATTTAAGAAAATGCATGTTTGATTCATTTGAAC TAGACGAAAAGCTAATTAGAGTAATGCAATCTCTTCACGTTCAAAACACACTATGTCTTAAGAG BLAST |
Tissue | flowers |
Gene name | LI_gene_71995; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_58747
Blastp | Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 50% of identity |
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Blastx | Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 49.21% of identity |
Eggnog | ATP-dependent CLP protease ATP-binding subunit(COG0542) |
Kegg | Link to kegg annotations (AT5G57710) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019464265.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |