Ll_transcript_58748

• Id Trinity: FTRINITY_DN57831_c1_g1_i11
• Name Transcript: Ll_transcript_58748
• Sequence: AAATAAACCATTTTTTATTCTCTCTCGCGCTTTTTACTTGTTCCGCTCTGCAGTGCACCGATAACTAGAATAGTCCTACCATATTATACTCTTAAAATTA CCTTTGCTTACTTGTAAAAAAAAATAAAAAAGGTGGTAAATTTATATTCACCACTTTACCAATTTATATTGTGATGGACAATTCAGTTATTCTGTATGAG ATGGATAATAGATTAATAGAGATAGAAAGCAAGTTGAAGTGGAGAAGGGAGAGATAGAGAGAAGAAAAGAAGCAATGGGGTTGTTGTTTTGAGTGAGGAA GGGATCTGATATTTCATATTCATTTCATTTTCATTGAATTCTCAACTCTCAAAATAGCTTTTTGGGTAACACTCAAGGGAGGTTGAAGATAAAAAGAAGG ACCCCATTGGAAACTACTTAAAACTTAAAAGCAAGGGAGAAAGTTAAGGTTATGAAACAACATAAGTGTAAGTTTCATACACATAAAGTCAAGTAACCAG AAAAGGCTATCTCAGATCAGATTCACATCAAAATTTCCTTCTTATTTTCTCCTCTCATTTAATTCATTCAAACCCACAAACCAAAATTCCAACTTTAAAC TTGAAACTGTGACCCTTTGAAGCAAAGTAAAGAAAAACTCCTTTTTTTATAACTGGATTATTATATTGAGCTGGAGCCACTTCCAATTATATCACTCCGG AAATGAGAGCTGGACTAAGCACAATCCAACAAACGCTAACGCCGGAAGCAGCAAATGTTCTCAACCAGTCAATCACGGAGGCTGGTCGCCGGAACCATAG TCAAACGACGCCGCTTCACGTGGCGGCGACACTTCTGTCATCCCCACCAGGTTACCTCCGTCAAGCGTGCATAAAATCTCACCCCAATTCCTCTCACCCT CTTCAGTGCAGAGCGTTGGAGCTCTGTTTCAGTGTTGCGCTTGAACGGTTACCAACTTCACAGAACACAAGCACTTCATCGGAGCCACCGATTTCAAATG CTCTTATGGCTGCTCTGAAGCGCGCTCAGGCTCACCAGCGCCGCGGTTACCCGGATCTGCAGCAACAGCCTCTCCTCGCCGTGAAAGTCGAGCTGGAACA GTTAATTATATCAATTCTTGATGATCCAAGTGTTAGCAGGGTCATGAGGGAAGCTAGTTTTTCTAGTCCTGCTGTTAAGGCAATGATCGAACAGTCATTG AATTCGGCACCTTCTAATTCGAATGGATTGGGGTTTCGGCCTGCTGCGATGACGATGTTGGCAGCGCAGCCACCAGGTAGGAGCTTATATTTGAATCCAA GGTTGCAACAGGTGATTGGTGGTGCAGGTGCAGGTCCAGGTTCAGGGCAATTGGGGCCGGGGCAAAGAGGCGAGGAAGTAAAAAAAATTGTTGATATATT GTTGAGGAGTAAGAAGAGGAACCCGATCTTAGTGGGTGAATCACAGCCAGAGGCTGCGATAAGAGAGGTTTTAGGGAAAATTGAAAATCAGGAGTTGGGA GAAGCAGGTTTCAGTTTTAGTAATCCTCATGTGATTCATTTGGAGAAGGAGATTCCTACCGACAGAACACAGGTTCCAGCTAGGCTGAAAGAGTTGGGTG ATTTGATTGAGGAACGGGTCGGTAAGTCGGGTGTTTTTGTGAATTTGGGTGACTTGAAATGGCTAGTTGAGCAGCCTGTTGGGTTTGGAGTTGGTAATTT GGGTAATAAGCAGCAACTGTCGGCTGTGGAGGCTGGGCGCTCTGCGGTTGCAGAGATGGCGAAATTGGTGGCCAAGTTTGGTGAGTCTGGTGCTGGTAGG CTTTGGTTATTAGGCACTGCAACTTGTGAGACTTATTTGAGATGTCAGGTTTACCATCCTTCTATGGAGAATGATTGGGATCTTCAGGTTGTGCCAATTA CCACCAGAATACCTATGCCTGGAATGTTTCCAAGGCTTGGGAATAATGGCATCATTGGTACCTCACTTGAGTCTTTGTCCCCATTAAAGGCATTCTCAAC TGCAGCAACCACTCCATCTAGGCATGCTTCTGAGAACATAGCTCCTACTGTAGAGTCAACTTGTTGTCCGCAATGTATGTGGAACTGCGAGCAAGAAATA GCAGAGATGTTAAAAGAAAATGAGAAATCCGATTCTGAATCCAAATCACAGGCAACTTGTCCGCCTCTTCCACAGTGGTTGCAGGTTGCTAGAACTAATA ATGATAATGCCAAAGTAAAGGATCAGTCTCAGAGTAAAAGCCAAGATGTGAAAAAGAGGACTCAAGAATTGCAGAAGAAGTGGCATGATACCTGCTTAAA TATACATCCTAAATTTCAACAACAAAACATGAGCTCAGATAGGATTACTTCGACTTCATTCAACATGACTGGCCTGTACAATGTGAGTTTGATGAGGGGC CAAATTCAACCCAAAATACCTCCGAATAAAAATCTTGAAACCTCATTGCAATTGAGCACAAACTCGATTCCAGCCCAACCACTACCGGAACCAGTGATCA GTCTGCGACAAAATCCGGTAACAACAGAACTGGTCCTTGGGCAAACAAAGCCAGCTGATAGCATCCCAGAAGGAACACAAGATCAACCCATCAATGACTT GTTGGGCTGTTTGTCACAACAGAACGACAAGTTTGATGAATTACAGAACAAAAAGCTACTTCATGCTGATTCTTTCAAGAAGCTACTCAAAGGTCTGACT GAAAAGGTGTGGTGGCAGCATGATGCAGCATCTGCAGTGGCTACCACAGTGACCCAGTGTAAAGTGGGGAATGGAAAAAGACGCCAACTTGGAACGAAGG GTGACATGTGGTTACTGTTCTTGGGTCCTGACAGAGTTGGCAAGAAGAAGATGGCAACAGCTGTTGCCGAGCTTGTAAATGGGTCCAATCCAACAATAAT ATCTCTTGCACAATGGAGTGGGGATGGAAACTCTGATGTTCCTCATCTCCGTGGAAAAACAATCCTTGATCGAATCGCAGAGACTATAAGAAGGAATCCA CATTCTATTATCATGCTTGAGGACATTGATGAAGCCAATATGCTTATTCGTGGCAGCATAAAAAGAGCCATGGAGCAAGGCCGGTTCGCTGATTCATATG GTCGCGAAATCAGTCTCGGCAATGTCCTGTTCATCCTCACTGCAAATTGGTTTCCGGAGGAGCTCAGCTACATGTCAAATGGAAATTCACTAGATGAAGA AAAGCTTGCTAATTTAGCAAAAGGAGGTTGGCAACTTCGGCTATCCGTGGCTAAGAAGGCATCAAAACGAAGACCGAGTTGGTTATCCGGTGAAGACAGA TCATCGAAACCAAGAAAAGATACCAATTCAGGCTTATCATTTGATCTCAATGAAGCTGCTGATGCAGATGAAGAGGACAAGCCAGATGGGTCACTCAATT CTAGTGACCTCACAGTGGACCATGAAGACAATCATGTCATTCATAATGAAAGATTACCTTCAATAATTCCACTTGACCTTCTGGATTCTGTAGATGATGC CATTGTCTTCAAGCCTTTGAATTTCAACCACATTCAATATAATTTCGCTACTACTATCACCAAAAGATTTTCCACCATCATTGGTAACGGAATCTCAATT GAAGTAAAAGAGGAAGCTCTTGAGAAAATTGCTAGTGGAGTGTGGTTAGGCCAAACTAGCATAGATGAATGGATGGAAAAAGTGTTGGTTCCAAGCTTCC ACCAGCTCAAGAAGAACTTCAATTCAAGTAGCAAAGATACCGAGTCTTCCGTGGTGGTTAGGCTCGAAGATGACGGTTACTCCGATGGCCGGAACTCGGA ACAGTGGCTACCTTCTACAGTGAGAGTGGTAGCAGAAGAGTATTGAGAGATTGAGTGAAATATTCGTTTTTGATGGTTATGTAAATATACTATTACTTTG GCGGGGAAAAGTCAAAGACCGTTAGTATGAGGGAAAAAACGGTTAGAAATGGCAGTGTCAACATTTTACCTTTTTTATAGAAAGATTATTTAATTTTTGC GTTTATAAACTTTATTATTATTTGTCTTGTAAGCATAGATAAGATATATTTATTAATTAAATGGAGAGTAATTATATTAATAAAATGAGGGCATTCTTAT TTTTTCCCGTGATTTCAAAAAAAA
• Tissue: flowers
• Gene name: LI_gene_71995;
• Additional information: details;

Expression of Ll_transcript_58748

FPKM

• FPAB: 4.1
• FPNAB: 7
• LF1: 2.7
• LF2: 2.7
• LF3: 3.2
• LF4: 4.1
• UF1: 2.8
• UF2: 2.2
• UF3: 4.8
• UF4: 4.5

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_58748

• Blastp: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 50.84% of identity
• Blastx: Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 50.51% of identity
• Eggnog: ATP-dependent CLP protease ATP-binding subunit(COG0542)
• Kegg: Link to kegg annotations (AT5G57710)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464265.1)
• Pfam: AAA domain (Cdc48 subfamily) (PF07724.13)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;