| Id Trinity | FTRINITY_DN57831_c1_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_58735 |
| Sequence | AAATAAACCATTTTTTATTCTCTCTCGCGCTTTTTACTTGTTCCGCTCTGCAGTGCACCGATAACTAGAATAGTCCTACCATATTATACTCTTAAAATTA CCTTTGCTTACTTGTAAAAAAAAATAAAAAAGGTGGTAAATTTATATTCACCACTTTACCAATTTATATTGTGATGGACAATTCAGTTATTCTGTATGAG ATGGATAATAGATTAATAGAGATAGAAAGCAAGTTGAAGTGGAGAAGGGAGAGATAGAGAGAAGAAAAGAAGCAATGGGGTTGTTGTTTTGAGTGAGGAA GGGATCTGATATTTCATATTCATTTCATTTTCATTGAATTCTCAACTCTCAAAATAGCTTTTTGGGTAACACTCAAGGGAGGTTGAAGATAAAAAGAAGG ACCCCATTGGAAACTACTTAAAACTTAAAAGCAAGGGAGAAAGTTAAGGTATTGATTTTTGTTCGTGTTTGTAAAAAGCTTGTTTTAATTGTTGTGCCAA CCTTTCCCATTCCAACCATTGAAAAATTGATTTTGTCTGTACTGAGCTATTATCTTTTTATTTTCCACACCACACACAAATTTCGTTTTCTGCTTGGTGG GGGCTCATAGGTTATGAAACAACATAAGTGTAAGTTTCATACACATAAAGTCAAGTAACCAGAAAAGGCTATCTCAGATCAGATTCACATCAAAATTTCC TTCTTATTTTCTCCTCTCATTTAATTCATTCAAACCCACAAACCAAAATTCCAACTTTAAACTTGAAACTGTGACCCTTTGAAGCAAAGTAAAGAAAAAC TCCTTTTTTTATAACTGGATTATTATATTGAGCTGGAGCCACTTCCAATTATATCACTCCGGAAATGAGAGCTGGACTAAGCACAATCCAACAAACGCTA ACGCCGGAAGCAGCAAATGTTCTCAACCAGTCAATCACGGAGGCTGGTCGCCGGAACCATAGTCAAACGACGCCGCTTCACGTGGCGGCGACACTTCTGT CATCCCCACCAGGTTACCTCCGTCAAGCGTGCATAAAATCTCACCCCAATTCCTCTCACCCTCTTCAGTGCAGAGCGTTGGAGCTCTGTTTCAGTGTTGC GCTTGAACGGTTACCAACTTCACAGAACACAAGCACTTCATCGGAGCCACCGATTTCAAATGCTCTTATGGCTGCTCTGAAGCGCGCTCAGGCTCACCAG CGCCGCGGTTACCCGGATCTGCAGCAACAGCCTCTCCTCGCCGTGAAAGTCGAGCTGGAACAGTTAATTATATCAATTCTTGATGATCCAAGTGTTAGCA GGGTCATGAGGGAAGCTAGTTTTTCTAGTCCTGCTGTTAAGGCAATGATCGAACAGTCATTGAATTCGGCACCTTCTAATTCGAATGGATTGGGGTTTCG GCCTGCTGCGATGACGATGTTGGCAGCGCAGCCACCAGGTAGGAGCTTATATTTGAATCCAAGGTTGCAACAGGTGATTGGTGGTGCAGGTGCAGGTCCA GGTTCAGGGCAATTGGGGCCGGGGCAAAGAGGCGAGGAAGTAAAAAAAATTGTTGATATATTGTTGAGGAGTAAGAAGAGGAACCCGATCTTAGTGGGTG AATCACAGCCAGAGGCTGCGATAAGAGAGGTTTTAGGGAAAATTGAAAATCAGGAGTTGGGAGAAGCAGGTTTCAGTTTTAGTAATCCTCATGTGATTCA TTTGGAGAAGGAGATTCCTACCGACAGAACACAGGTTCCAGCTAGGCTGAAAGAGTTGGGTGATTTGATTGAGGAACGGGTCGGTAAGTCGGGTGTTTTT GTGAATTTGGGTGACTTGAAATGGCTAGTTGAGCAGCCTGTTGGGTTTGGAGTTGGTAATTTGGGTAATAAGCAGCAACTGTCGGCTGTGGAGGCTGGGC GCTCTGCGGTTGCAGAGATGGCGAAATTGGTGGCCAAGTTTGGTGAGTCTGGTGCTGGTAGGCTTTGGTTATTAGGCACTGCAACTTGTGAGACTTATTT GAGATGTCAGGTTTACCATCCTTCTATGGAGAATGATTGGGATCTTCAGGTTGTGCCAATTACCACCAGAATACCTATGCCTGGAATGTTTCCAAGGTAT TTTTACTTCTGTTTGTTTACTTTTGTCAGTTTGTATCACAATTTTACCCAATATATTGTTTGGACAGAGATATTGATTTATGTATATTTGGTTGGTTAAT TCAGTAATGCCTGCTGTTTTCATCAAATTTTATCCGAGATAATATAAATTTATTTCTTTTGACTTCTTTGCTCAAGTGATTTTCTTTTATTATCATGTTT GATGGAATGGAATTAGGAATTATTCTTCATAGAATCAATTAGAACTGTAGTTTTGGAGAATCTTATCCGATATGTTACTTCTGTTCTCGGGAACACATAT TCCATTTTCAATGTAATATAGTGTGTCATGTTCCTGTTTCCACTGACAATATTAACCACTGGAGGATATTTAGGCTCAGGAATATGTTTATTCTGTCCAG CGTGTGGTGTTATCTTGTGATTATTTTATTTTATTTATAATCAGGCTTGGGAATAATGGCATCATTGGTACCTCACTTGAGTCTTTGTCCCCATTAAAGG CATTCTCAACTGCAGCAACCACTCCATCTAGGCATGCTTCTGAGAACATAGCTCCTACTGTAGAGTCAACTTGTTGTCCGCAATGTATGTGGAACTGCGA GCAAGAAATAGCAGAGATGTTAAAAGAAAATGAGAAATCCGATTCTGAATCCAAATCACAGGCAACTTGTCCGCCTCTTCCACAGTGGTTGCAGGTTGCT AGAACTAATAATGATAATGCCAAAGTAAAGGATCAGTCTCAGAGTAAAAGCCAAGATGTGAAAAAGAGGACTCAAGAATTGCAGAAGAAGTGGCATGATA CCTGCTTAAATATACATCCTAAATTTCAACAACAAAACATGAGCTCAGATAGGATTACTTCGACTTCATTCAACATGACTGGCCTGTACAATGTGAGTTT GATGAGGGGCCAAATTCAACCCAAAATACCTCCGAATAAAAATCTTGAAACCTCATTGCAATTGAGCACAAACTCGATTCCAGCCCAACCACTACCGGAA CCAGTGATCAGTCTGCGACAAAATCCGGTAACAACAGAACTGGTCCTTGGGCAAACAAAGCCAGCTGATAGCATCCCAGAAGGAACACAAGATCAACCCA TCAATGACTTGTTGGGCTGTTTGTCACAACAGAACGACAAGTTTGATGAATTACAGAACAAAAAGCTACTTCATGCTGATTCTTTCAAGAAGCTACTCAA AGGTCTGACTGAAAAGGTGTGGTGGCAGCATGATGCAGCATCTGCAGTGGCTACCACAGTGACCCAGTGTAAAGTGGGGAATGGAAAAAGACGCCAACTT GGAACGAAGGGTGACATGTGGTTACTGTTCTTGGGTCCTGACAGAGTTGGCAAGAAGAAGATGGCAACAGCTGTTGCCGAGCTTGTAAATGGGTCCAATC CAACAATAATATCTCTTGCACAATGGAGTGGGGATGGAAACTCTGATGTTCCTCATCTCCGTGGAAAAACAATCCTTGATCGAATCGCAGAGACTATAAG AAGGAATCCACATTCTATTATCATGCTTGAGGACATTGATGAAGCCAATATGCTTATTCGTGGCAGCATAAAAAGAGCCATGGAGCAAGGCCGGTTCGCT GATTCATATGGTCGCGAAATCAGTCTCGGCAATGTCCTGTTCATCCTCACTGCAAATTGGTTTCCGGAGGAGCTCAGCTACATGTCAAATGGAAATTCAC TAGATGAAGAAAAGCTTGCTAATTTAGCAAAAGGAGGTTGGCAACTTCGGCTATCCGTGGCTAAGAAGGCATCAAAACGAAGACCGAGTTGGTTATCCGG TGAAGACAGATCATCGAAACCAAGAAAAGATACCAATTCAGGCTTATCATTTGATCTCAATGAAGCTGCTGATGCAGATGAAGAGGACAAGCCAGATGGG TCACTCAATTCTAGTGACCTCACAGTGGACCATGAAGACAATCATGTCATTCATAATGAAAGATTACCTTCAATAATTCCACTTGACCTTCTGGATTCTG TAGATGATGCCATTGTCTTCAAGCCTTTGAATTTCAACCACATTCAATATAATTTCGCTACTACTATCACCAAAAGATTTTCCACCATCATTGGTAACGG AATCTCAATTGAAGTAAAAGAGGAAGCTCTTGAGAAAATTGCTAGTGGAGTGTGGTTAGGCCAAACTAGCATAGATGAATGGATGGAAAAAGTGTTGGTT CCAAGCTTCCACCAGCTCAAGAAGAACTTCAATTCAAGTAGCAAAGATACCGAGTCTTCCGTGGTGGTTAGGCTCGAAGATGACGGTTACTCCGATGGCC GGAACTCGGAACAGTGGCTACCTTCTACAGTGAGAGTGGTAGCAGAAGAGTATTGAGAGATTGAGTGAAATATTCGTTTTTGATGGTTATGTAAATATAC TATTACTTTGGCGGGGAAAAGTCAAAGACCGTTAGTATGAGGGAAAAAACGGTTAGAAATGGCAGTGTCAACATTTTACCTTTTTTATAGAAAGATTATT TAATTTTTGCGTTTATAAACTTTATTATTATTTGTCTTGTAAGCATAGATAAGATATATTTATTAATTAAATGGAGAGTAATTATATTAATAAAATGAGG GCATTCTTATTTTTTCCCGTGATTTCAAAAAAAA BLAST |
| Tissue | flowers |
| Gene name | LI_gene_71995; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_58735
| Blastp | Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 45.41% of identity |
|---|---|
| Blastx | Protein SUPPRESSOR OF MAX2 1 from Arabidopsis with 61.08% of identity |
| Eggnog | ATP-dependent CLP protease ATP-binding subunit(COG0542) |
| Kegg | Link to kegg annotations (AT5G57710) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464265.1) |
| Pfam | AAA domain (Cdc48 subfamily) (PF07724.13) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |