Ll_transcript_56534

• Id Trinity: FTRINITY_DN57838_c0_g2_i3
• Name Transcript: Ll_transcript_56534
• Sequence: GAAACCGCGTTTTTTGATTGGACGAAATAGATGAAACCAAATGTGTGATGACTTCAACAACTGAGACAAAGAAACCATAACCAACCGAGTTTGCCTTTTC TAAACTTCAAATACCAACAATCCTTCTCAATTTTCCCTTTTTCTCTTCGTATTTTTCGTTTTTCAATTTCTCCGGAAAAAGTGCTTGCGTTTGTTTCCGA CGAAAATTTTATTCTCTTCTTCGAATTCTGGAATAGATAGTATCAACGCCGTTTAGGTAGTTAGATCTCAAATTTCAGTTAGGTCTGATTTTCGGCTACA TTTGGATAAGTATTTGTTTCGGTTATCCGGTTACGTAATTGTAGCATTGAGTTGAAAGGTTAAAGTGCTTTCCCATCTGTGGTATGTTGATTGCATGACC TTGCACTTCAGTTTCTGCAATGGCCTACCCGGGTTCAATGCAATTGTCTCGTACTAGTGGATTCTGTAATTCTCATCACAATCCGATGGGGGTTGGTCGA TTACATTTGGTTACCGTAAACCTTTCACCGCTTAGTTTGAATAAACAGAAGCAGGATTCTTCAGCACTCCATCTTTTAAGTAGAGTACCACCAATAAGGC ATGTGCCTTCCAAATGTAAAATTTTTGTATGTCGATCTGTCCTGATACCAGGTGGAGGGAGTGTGACTCCACTCCTGAAATCTTCTGCTGTTATTTTAAC AAGGTTGGCCTCTCTCCCTTAGTTAACCCAACTTAATGGATATACATGTTATTGTATATAATTTTCGATTAGTATCCTTCGTTTTGCCATAAAACATATG TTTGTTAAGGTGTGTGCACTGTTTACTTTAATGTAGTAAAATTTAAGCTTTGTAGCCTTACTCATAACTACACAATAACCATCATCATACTCATGCCATG GGTGCTTTCTGCACCTCTTCTAAAATTCATGCTATTTTTTGTGCTATAATAGCATGCAGTTTTGTTTAAGAGGTATATAGTTATGAACCATATCCTTTCA GACCAGTGAATTTCCTTTGGCATCTTTCTTAATTCGACGACTTATCTCTAAGACATTAGTGTGTTGTCACTTGTCAGTCATCTAGTGTCAAAGTAAGCTT CATGGCTACTCACCCTTCCGATGCTTTGTTTTTGGTATATATTTATTAGCTGTTGAGTTATACTTTGGAAGTAACTTCAACTGGTAACACTACCTGTTTC TTTACTCTCTTTGAGAAGTGAATATAAATTGGTATTGACTGGACCACACAAACTTCAATTAATTGGTATACGAACTTGTAAAGTAATCTGCGCCATGGTA TATGATTTGTATTTTTGTGTTATTTCTGAAGAACCAATTGATGCTGCAGTTCTATTATTATTGCTACATCTCTTTTCTTTTTATTTTTTAATATAGCATT TAATGCATAGTCATGGGAACATTTACTCTTATATACTTATGCAGGTCATATGATGCTTTACGAGGAAGCCCTGTTTTGCTTCGGTTAATTCCGGCGCTCG GTCTCATCGCCTTTACTGTTTATGGTCTTGAGCCACTCCTACGCCTCAGCGGAATTCTATTTCTTCAAAGAACGGATAGTAGTTGGAAGAAAAGTAGTTT GCGATATGTTATGACATCATATTTTCAGCCTTTGCTGTTGTGGTCTGGAGCAATGCTCATATGCAGGGCATTAGATCCACTAGTCCTGCCATCAGAGGCC AGCCAGGTTGTGAAGCAGCGGCTGCTGAATTTTGTTAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCGTAATTCAACAAGCACAAA AATTCTTTATGGAGACAAATGACTCAAGTGATGCAAGGACTATGGGCTTTGATTTTGCTGGGAAAGCTGTATATTCAGCTGTATGGGTTGCTGCCGTGTC ATTGTTCATGGAGTTGCTAGGTTTCTCCACACAAAAGTGGTTAACTGCTGGTGGTTTGGGCACTGTATTGCTCACACTTGCAGGTCGTGAGATATTTACA AACTTTCTTTCGAGCATAATGATACATGCAACTCGGCCATTTATTATAAATGAGTGGATTCAAACAAAGATTGGAGGATATGAAGTTTCTGGTACAATTG AGCATGTAGGATGGTGGTCACCAACTATTGTGAGAGGTGATGATCGTGAGGCAGTCCATATTCCTAATCACAAGTTCACTGTAAATGTTGTAAGAAATCT GAGTCAGAAATCTCATTGGCGCATCAAGAGTTACATTGCTATTAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCGGATATGCGCAAAGTTTTG TCTAAGAATCCTCAAGTTGAGCAGCAAAAATTGCACAGAAGGGTTTTTCTAGAGAATGTCAATCCAGAAAATCAAGCTCTTATGATATTAATATCTTGTT TTGTGAAAACTTCACATTTTGAAGAGTATCTCTGCGTTAAGGAGGCAATGCTCTTGGATCTTCTCAGAGTTGTCAGTCATCATCGAGCCCGGCTGGCCAC TCCCATCCGCACAGTTCAGAAATTTTACCGTGAGGCTGACTCAGAAAATATTCCCTTTGGGGACACCATTTTCACTAGATCCAGAGCAGCATCAAGTCGC TTCCTACTGATAGAACCACCATATAAAGTTAATGGTGATGATAAAGTCAAGTCTTCAACTCGTCCAACTCGTATAAATGAGGAAAAAGATGCCAAGATTG ATGAAACTTCGGCACCTGATTCCAAAGGAGATCAGAGTTCTGCTGTGACATCAACCTCACCACCTGGTGCAAAGTCAGTTTCTGAAGCTCAAAGTCAGAC TATGGGTTCAGATAGTTCAGTTGAGAAGACCCCCAAAACCGTGCAGCCTAAAAAGGAAAGTGCAGGAGATGCAGGGAAGGGAGCTTCAGTTCCTATATCT AAAAACCCGGCACAAAGTCCTGTGCCTGAGGTTTCTCCCGATGCTTCCCATGAGTCAAGAAGAGGAGACACTGCTTCTGCTACCTCTTCACAGCCAAAGC AAGATGAAGAGAAGTCTGTTGTTTCTTCACCATCAACTAGACCTTCCTTGGAAGAGAATATTCTTCTCGGTGTTGCCCTAGAAGGCTCAAAACGAACTCT TCCGATCGAGGAAGACACTCCATCTCATATCCCTGCAGAGTCGCAAGAATTCGCTGTCCAACTGAATGGGAGTGGACCTCCTGCTAGCAAGGATAAGAAG GATGGTCAGATATCTTCATTTCCAACTGCTAAGCAAAATGACTAGAATAGTAGAAGTTGATATTTTGTATATGGCTTCTATTGAAGTTGTGCAAAAAGTA TCCAGCTGTCTTTTTAAAGTTGGAATCATGCATTGTTGATCACCCATATATGTACATAATTGTCAAATCATGATTTCTATAACTGCATGTCTGTATCCTA CAGTTATATAACAAAAACTGTACCCATACAGAAGATCTGAATAGTAGTGTTTTTGTTTATGGTTTATTCTCCACTCAGAGAATGGGCCATAACAACTGCT CAGATTATAAATGGAGGTGTTTTGGATTTAAGGGTTCAGAAACAGTATGTATAATTTTTTTCAGTCATGGAATTTTATGGATTAATGGTGGTATTTCACT ACCCTGAAACCCTATCATCTCATTATTTCTGGCTGTGCTCTTGGAAATTTTGGGCTGGTTCATGTTTCAGCTATGATGACATAAAACCAATGGTAAAAGC TTAGAGTGGTTCTTCTTAACAAAATAACAACATTTTTACTTTGTTCTCCACTGTGTCATTCTTATTTCTCCACTCTTGTTCTCAAAT
• Tissue: flowers
• Gene name: LI_gene_72039;
• Additional information: details;

Expression of Ll_transcript_56534

FPKM

• FPAB: 1.9
• FPNAB: 3.4
• LF1: 3.3
• LF2: 1.7
• LF3: 3.3
• LF4: 3.4
• UF1: 2.4
• UF2: 3.1
• UF3: 3.6
• UF4: 4.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_56534

• Blastp: Mechanosensitive ion channel protein 2, chloroplastic from Arabidopsis with 59.43% of identity
• Blastx: Mechanosensitive ion channel protein 2, chloroplastic from Arabidopsis with 59.43% of identity
• Eggnog: Mechanosensitive ion channel(COG0668)
• Kegg: Link to kegg annotations (AT5G10490)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_020962169.1)
• Pfam: Mechanosensitive ion channel (PF00924.17)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;