| Id Trinity | FTRINITY_DN57838_c0_g2_i5 |
|---|---|
| Name Transcript | Ll_transcript_56536 |
| Sequence | GAAACCGCGTTTTTTGATTGGACGAAATAGATGAAACCAAATGTGTGATGACTTCAACAACTGAGACAAAGAAACCATAACCAACCGAGTTTGCCTTTTC TAAACTTCAAATACCAACAATCCTTCTCAATTTTCCCTTTTTCTCTTCGTATTTTTCGTTTTTCAATTTCTCCGGAAAAAGTGCTTGCGTTTGTTTCCGA CGAAAATTTTATTCTCTTCTTCGAATTCTGGAATAGATAGTATCAACGCCGTTTAGGTAGTTAGATCTCAAATTTCAGTTAGGTCTGATTTTCGGCTACA TTTGGATAAGTATTTGTTTCGGTTATCCGGTTACGTAATTGTAGCATTGAGTTGAAAGGTTAAAGTGCTTTCCCATCTGTGGTATGTTGATTGCATGACC TTGCACTTCAGTTTCTGCAATGGCCTACCCGGGTTCAATGCAATTGTCTCGTACTAGTGGATTCTGTAATTCTCATCACAATCCGATGGGGGTTGGTCGA TTACATTTGGTTACCGTAAACCTTTCACCGCTTAGTTTGAATAAACAGAAGCAGGATTCTTCAGCACTCCATCTTTTAAGTAGAGTACCACCAATAAGGC ATGTGCCTTCCAAATGTAAAATTTTTGTATGTCGATCTGTCCTGATACCAGGTGGAGGGAGTGTGACTCCACTCCTGAAATCTTCTGCTGTTATTTTAAC AAGGTTGGCCTCTCTCCCTTAGTTAACCCAACTTAATGGATATACATGTTATTGTATATAATTTTCGATTAGTATCCTTCGTTTTGCCATAAAACATATG TTTGTTAAGGTGTGTGCACTGTTTACTTTAATGTAGTAAAATTTAAGCTTTGTAGCCTTACTCATAACTACACAATAACCATCATCATACTCATGCCATG GGTGCTTTCTGCACCTCTTCTAAAATTCATGCTATTTTTTGTGCTATAATAGCATGCAGTTTTGTTTAAGAGGTATATAGTTATGAACCATATCCTTTCA GACCAGTGAATTTCCTTTGGCATCTTTCTTAATTCGACGACTTATCTCTAAGACATTAGTGTGTTGTCACTTGTCAGTCATCTAGTGTCAAAGTAAGCTT CATGGCTACTCACCCTTCCGATGCTTTGTTTTTGGTATATATTTATTAGCTGTTGAGTTATACTTTGGAAGTAACTTCAACTGGTAACACTACCTGTTTC TTTACTCTCTTTGAGAAGTGAATATAAATTGGTATTGACTGGACCACACAAACTTCAATTAATTGGTATACGAACTTGTAAAGTAATCTGCGCCATGGTA TATGATTTGTATTTTTGTGTTATTTCTGAAGAACCAATTGATGCTGCAGTTCTATTATTATTGCTACATCTCTTTTCTTTTTATTTTTTAATATAGCATT TAATGCATAGTCATGGGAACATTTACTCTTATATACTTATGCAGGTCATATGATGCTTTACGAGGAAGCCCTGTTTTGCTTCGGTTAATTCCGGCGCTCG GTCTCATCGCCTTTACTGTTTATGGTCTTGAGCCACTCCTACGCCTCAGCGGAATTCTATTTCTTCAAGTAGTGACCGCATATTCTTATTTTTTCTCTGA TTACTATAATTAATACTTCACATCTTCTCTGATTTACGGCATATTTTCAGAGAACGGATAGTAGTTGGAAGAAAAGTAGTTTGCGATATGTTATGACATC ATATTTTCAGCCTTTGCTGTTGTGGTCTGGAGCAATGCTCATATGCAGGGCATTAGATCCACTAGTCCTGCCATCAGAGGCCAGCCAGGTTGTGAAGCAG CGGCTGCTGAATTTTGTTAGATCTTTGTCAACAGTGATTTCATTTGCTTACTGTTTATCAAGCGTAATTCAACAAGCACAAAAATTCTTTATGGAGACAA ATGACTCAAGTGATGCAAGGACTATGGGCTTTGATTTTGCTGGGAAAGCTGTATATTCAGCTGTATGGGTTGCTGCCGTGTCATTGTTCATGGAGTTGCT AGGTTTCTCCACACAAAAGTGGTTAACTGCTGGTGGTTTGGGCACTGTATTGCTCACACTTGCAGGTCGTGAGATATTTACAAACTTTCTTTCGAGCATA ATGATACATGCAACTCGGCCATTTATTATAAATGAGTGGATTCAAACAAAGATTGGAGGATATGAAGTTTCTGGTACAATTGAGCATGTAGGATGGTGGT CACCAACTATTGTGAGAGGTGATGATCGTGAGGCAGTCCATATTCCTAATCACAAGTTCACTGTAAATGTTGTAAGAAATCTGAGTCAGAAATCTCATTG GCGCATCAAGAGTTACATTGCTATTAGTCACTTGGATGTTAACAAAATTAATAATATTGTAGCGGATATGCGCAAAGTTTTGTCTAAGAATCCTCAAGTT GAGCAGCAAAAATTGCACAGAAGGGTTTTTCTAGAGAATGTCAATCCAGAAAATCAAGCTCTTATGATATTAATATCTTGTTTTGTGAAAACTTCACATT TTGAAGAGTATCTCTGCGTTAAGGAGGCAATGCTCTTGGATCTTCTCAGAGTTGTCAGTCATCATCGAGCCCGGCTGGCCACTCCCATCCGCACAGTTCA GAAATTTTACCGTGAGGCTGACTCAGAAAATATTCCCTTTGGGGACACCATTTTCACTAGATCCAGAGCAGCATCAAGTCGCTTCCTACTGATAGAACCA CCATATAAAGTTAATGGTGATGATAAAGTCAAGTCTTCAACTCGTCCAACTCGTATAAATGAGGAAAAAGATGCCAAGATTGATGAAACTTCGGCACCTG ATTCCAAAGGAGATCAGAGTTCTGCTGTGACATCAACCTCACCACCTGGTGCAAAGTCAGTTTCTGAAGCTCAAAGTCAGACTATGGGTTCAGATAGTTC AGTTGAGAAGACCCCCAAAACCGTGCAGCCTAAAAAGGAAAGTGCAGGAGATGCAGGGAAGGGAGCTTCAGTTCCTATATCTAAAAACCCGGCACAAAGT CCTGTGCCTGAGGTTTCTCCCGATGCTTCCCATGAGTCAAGAAGAGGAGACACTGCTTCTGCTACCTCTTCACAGCCAAAGCAAGATGAAGAGAAGTCTG TTGTTTCTTCACCATCAACTAGACCTTCCTTGGAAGAGAATATTCTTCTCGGTGTTGCCCTAGAAGGCTCAAAACGAACTCTTCCGATCGAGGAAGACAC TCCATCTCATATCCCTGCAGAGTCGCAAGAATTCGCTGTCCAACTGAATGGGAGTGGACCTCCTGCTAGCAAGGATAAGAAGGATGGTCAGATATCTTCA TTTCCAACTGCTAAGCAAAATGACTAGAATAGTAGAAGTTGATATTTTGTATATGGCTTCTATTGAAGTTGTGCAAAAAGTATCCAGCTGTCTTTTTAAA GTTGGAATCATGCATTGTTGATCACCCATATATGTACATAATTGTCAAATCATGATTTCTATAACTGCATGTCTGTATCCTACAGTTATATAACAAAAAC TGTACCCATACAGAAGATCTGAATAGTAGTGTTTTTGTTTATGGTTTATTCTCCACTCAGAGAATGGGCCATAACAACTGCTCAGATTATAAATGGAGGT GTTTTGGATTTAAGGGTTCAGAAACAGTATGTATAATTTTTTTCAGTCATGGAATTTTATGGATTAATGGTGGTATTTCACTACCCTGAAACCCTATCAT CTCATTATTTCTGGCTGTGCTCTTGGAAATTTTGGGCTGGTTCATGTTTCAGCTATGATGACATAAAACCAATGGTAAAAGCTTAGAGTGGTTCTTCTTA ACAAAATAACAACATTTTTACTTTGTTCTCCACTGTGTCATTCTTATTTCTCCACTCTTGTTCTCAAAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72039; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56536
| Blastp | Mechanosensitive ion channel protein 2, chloroplastic from Arabidopsis with 62.68% of identity |
|---|---|
| Blastx | Mechanosensitive ion channel protein 2, chloroplastic from Arabidopsis with 61.96% of identity |
| Eggnog | Mechanosensitive ion channel(COG0668) |
| Kegg | Link to kegg annotations (AT5G10490) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_020962169.1) |
| Pfam | Mechanosensitive ion channel (PF00924.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |