Id Trinity | FTRINITY_DN57842_c0_g1_i8 |
---|---|
Name Transcript | Ll_transcript_56956 |
Sequence | AATACATTCCCACTCACATGCCTCTTTGTGTTGTCTTAACTTTTCAACTTTGTCCTCTGCCTCTCTCTCTCTCTCTTTATATCTTGTTCCCCACTATTTA TTTTTTCTAGTTATTATAATCTTTGTTTTCTATTCATTTGGATTTGATAGGATTGAGGTTGTCTTTTAGGCAATGTATGTTATTTATGTTTGATGCATTT TTAAGGTTCTTTCTGTTACTTTGAAAACATTTTTCAGAAAGATGAAGGCTTTTCTGTATCTGCTAGTGTCCTTAGTTCTGTGTGGTTATGGTGTGAGTAA AGAGTGCACAAACATTCCAACCCAATCACACACATTCCGGTATGAGTTGTTAACATCAAATAATGAAACATGGAAGCAAGAGGTTATGTCTCATTACCAT TTGACACCAACTGATGATTCAGCTTGGGAGGATATGCTACCAAGGAGGTTCCTGAGAGAGGATCATCAACATGAATGGTCAATGATGTATAGGAAAATCA AGAACTTGGGTGTGTTCAATCCACCTAAGGGGTTTCTAAAAGAGGTTCCTTTGCAGGATGTGAGATTGCAAGAGGGTTCAATTCATGGTCAAGCACAGAA AACAAACTTGGAGTATTTGTTAGTGTTGGATGTGGATAGGTTGATTTGGAGCTTCAGGAAAAATGCTGGTCTACCTAATCCTTCTACACCTTATGGAGGT TGGGAAGGTGCTGCGGTTGAGCTCAGGGGACATTTTGTTGGCCATTACTTGAGCGCATCGGCTCTAATGTGGGCGAGCACACAAAATAGTAGCCTGAGGG AGAAAATGTCAGCTCTTGTTGCTGGCCTATCTGCTTGTCAAGAGAAAATTGGAACAGGATATCTCTCAGCATTTCCGTCTGAGTTTTTCGATCGATTTGA ATCCATTCAGCCTGTTTGGGCTCCCTATTACACCATTCACAAGATCATGGCCGGCTTGTTGGATCAACATACTGTAGCTGGAAACGCTCAGGCTCTAAAA ATGGTGACATGGATGGTTGATTACTTTTATAACCGTGTGCTGAACGTAGTAACACGGCTCAGTATAAATAGACACTATCAATCACTAAACGAGGAAACAG GAGGAATGAATGATGTCCTTTACAGATTATATAGCTTAACCGGAGATCCAAAGCATCTAGTGTTAGCTCACCTTTTTGACAAGCCATGCTTTCTGGGATT GCTTGCAGTTCAGGCTAATGATATAGCTGATTTTCATGCTAATACGCATATCCCAGTTGTTGTTGGATCTCAAATGCGGTACGAAGTCACAGGAGATCCA CTTTATAAGGAAATTGGGACATTCTTTATGGACCTTATTAACTCTTCTCACAGCTATGCAACTGGAGGGACATCAGTCAGTGAGTTCTGGTATTAAGATG TCGCCGTTTTTAGTTTCGGTTCTTCAAAATGCATTTATAATTATCCATTGAATAATTGTTTTATTCAACTAGTGTTAGATACCAGAAACTTACTAAAGGA AAAATGGAGCCTATCTCCTTGCTGTAGAGATATTTCCTCTTGGTTAAGCTAAGAAACTAGAAAGAAAAATAGAAAACACCAGCAATACTTAGAGAGGGTT TGCTCCTCCTTGGCCAACTGGCTCCAAATTCGCTTACGAATAATCTTTTCTCGCCCACTCTCTCCTTATATTCTCATTCTAACTGACCTGGCGCATTCGC TGGTTTGTTACAAATTCCACTCCGAGCCGCTCACATTTCCCACCCATATCAGCTACGTGTCATGTTGAAAATGTTCTGTTCTGTTGTTTTTGATAATAAT CAGTTCAAGATTTCTTTACTAACACCTTTTCTTCAATTTTTGAATAGGCATGATCCAATGAGAATAGCAGACAACCTAAAAACAACAGAAAATGAAGAGT CATGCACAACTTATAATATGCTGAAGGTTTCGCGCCACCTCTTTAGATGGACCAAAGAAGTCTCTTATGCAGATTATTACGAGCGTGCCTTAACCAATGG TGTACTCAGCATTCAAAGAGGAACAGATCCTGGAGTGATGATTTATATGCTTCCACTAGGACGTGGGGTTTCCAAGGCTAGAACTGGACATAGCTGGGGA ACACCGTTTGATTCTTTCTGGTGCTGCTATGGAACTGGAATCGAATCATTCTCAAAGCTGGGAGATTCTATCTATTTTGAAGAGGAAGGAAATGACCCGA CTCTTTACGTCATTCAGTACATATCAAGCTCATTTAATTGGAGATCTGGAAAGGTTACTGTTAATCAGGCCGTTGTTCCGGCTGCTTCATGGGATCCTTA CCTAAGAGTGACATTTACATTTTCTCCTACTGAGAAAATTGGTACTTCATCCACATTGAACTTTCGAATACCATCTTGGACTCAAACAAATGGCGCCAAG GGGATATTGAATGGTGAAACTTTATCTCTGCCAGCTCCAGGAAATTTTTTATCAGTCACACGACAGTGGAGTGCCGGTGACAAACTGACTCTTCAATTGC CTATTACCCTCAGAACAGAGGCCATAAAAGATGACAGGTCTGAATATGCATCCCTTCAAGCAATTCTTTATGGTCCTTACCTACTTGCCGGTCATACTAC CGGAGATTGGGACATTAAAGCTGGGACTAACACAGCTATTTCAGAATGGATCACACCCATTCCTGCCAGCTACAATACTCAACTGATTTCTTTTTCCCAA GACTATTCAAAATCAAGTTTTGTTTTAACAAACTCAAACCAATCACTTACAATGCAAAAGTTACCTGCCCCCGGCACAGATTTGGCTCCTCATGCAACAT TTCGCCTTATACTAAAAGATTCTTCCATAAAGCTTTCAACTTTGGAAAATGCTGTTGGTGAATCAGTGATATTAGAACCATTTGATCTTCCAGGAATGAA TGTGATTCACCAAGGAGCAGATCAACCTCTTGTGATTTCTTCACAAGTTGAGCCATCTTCTATTTTTCTTGTGGTACCAGGATTGGATGGAAGAAATGAA ACCATATCTTTAGAATCTCAAAGCAACAATGGTTGCTATGTGTGCAGTGGTGTAATAAGCTCTAGTGCAGAAGTGAAACTCAGTTGCAAATCTGATTCTG ATGCTACTTTTAACCAAGCAGCAAGCTTTGTTGGATGGAAAGGAATAAGACAATATAATCCTATCAGCTTTGTGGCTAAAGGGACAAACAGGAATTTTCT TTTGGAGCCATTACTCACCTTCAGAGATGAGTATTATACTGTGTATTTCAACATTCAAGACTAATTGGTTAAAGTTTCTATATTTCCCACAACATCAAGT ATGGGGTACTATAAGTTTCATGTACAAATGTTCAAATAATCATTATTCAATTTCATAATGAATAGTTGATAAGTTTCTTGTATCTTCTTGTGCTTGGTTA TTAAAGTGGTTGCTATGATTTTCAGAATAAGTAAATAGTTACTCAG BLAST |
Tissue | flowers |
Gene name | LI_gene_72072; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56956
Blastp | - |
---|---|
Blastx | - |
Eggnog | - |
Kegg | - |
CantataDB | Link to cantataDB annotations (CNT0000361) |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019413304.1) |
Pfam | Beta-L-arabinofuranosidase, GH127 (PF07944.11) |
Rfam | - |
GO | - |