Ll_transcript_57241

Id TrinityFTRINITY_DN57843_c1_g1_i1
Name TranscriptLl_transcript_57241
SequenceCACCTCTTTCCTCCCTCCACCTCTTAAACCCACAACCACCACCACCCCCACCACCACCAAACCCATCATTCCCAAAATCCACTCCTCTCTCCACCGCGAC CCATGGTCCCCCATCGACGGCGACATAACAAAACCCAAACCCAGAACAAAGGACCCAAGCAACCCTCTCTCCGACGACAACGCGCGCCGCATAATCAACG GCAAAGCTCGCTACCTAAGCGTCCTCAGAAGGAACCAGGGCCCTCAGGCTGAGACACCAAGGTGGATAAAGAGAAGCCCTGAACAAATGGTTCAGTACTT GGAGGATGATAGGAACGGACAACTCTATGGGAAGCATGTTGTTGCAGCGATTAAGAAAGTTAGGGCTTTGTCACAAAGGGTTGATGGTGAATATGAGATG AGAATGGTTATGGCAACTTTTGTTGGCAAACTTAGCTTCAGGGAAATGTGTGTTGTGCTTAAGGAGCAAAAGGGGTGGAGACAAGTTCGGGACTTTTTTG CTTGGATGAAATTGCAGTCTGGTGCTTCAACAGCTGAGCTATCGCCCCACTGTTATTGTCTACACGATTGTATTGCGCTTATATGGGCAAGTTGGAAAGC TAAAACTGGCTGAAGAGACGTTCTTGGAGATGCTTGATGCAGGGTGTGAACCAGATGAAGTTGCTTGTGGTACCATGCTTTGTTCATATGCCAGATGGGG ACGCGACAAGGCTATGTTTTCTTTTTATTCGGCGGTAAAAGAAAGGGGCATCATACTCCCTGTTGCCGTTTTCAACTTTATGTTGTCCTCTTTGCAAAAG AAATCACTCCATAGACAGGTTGCACTATTGTGGATGGATATGATAGGAAAAGGGACGATACCTAATGCTTTTACGTATACAGTAGTCATCAGCTCGCTAA TCAAAGAAGGGCTGCATAAAGAAGCTTTAAGGACTTTCGATGAAATGAAGAATAATGGATTTGTTCCCGAGGAGGTAACTTATAGCCAGCTTATAACTTT AAGTGCTAAAAGTGGAAACAGGGATGAAGTGCTAAGACTGTATGATGATATGATGCTTCGAAGAATAGTTCCTAGTAATTACACTTGTGCTTCACTTCTG GCTCTGTATTACAAATACGAGGACTTCTCAAGAGCCCTCTCCCTCTTTTCGGAAATGGTAAGGAACAAAATTCCCGCTGATGAAGTTATATATGGTTTGC TTATAAGAATTTATGGAAAGCTTGGTTTATACGAGGATGCTCACAAGACATTTGAAGAGACAAAGCAGAAGGGCCTGTTGACCGATGAGAAAACATATTT GGCAATGGCACAAGTCCATCTTAGTTCAGGAAATGCAGACAAAGCTTTGGACACTATCGAGCTCATGAAGTTTAACAACGTATGGTTCTCTCGATTTGCT TATATTGTCCTGCTGCAATGTTATGTGATGAAAGAAGATGTAGAATCTGCTGAAGGATCATTTTTAGCTCTCTGCAAGACAGGACCACCTGATGCTGGTT CTTGTAATGATATGCTCAGTCTCTATATAAGACTTAATTTGATGAACAAGGCCAAGGAATTCATTGCCCGAATAAGGGAAGGTGATATACTTTTTGACGA GGTGCTTTATAGGATGGTTATGAAGGTTTATTGCAAGGAAGGAATGCTGCTAGAAGCTGAGCAATTGACAAATCGGATGGTTAAGAATGAATCTCTTAGA AAATATAAATTTGTCCAGACATTTTATTGGATTCTTTGTCAGTGTAAAGAGGATGTGCAATCTGATGATGAGCTGCTAGCCATTGAGCCTATCGACAAAC TTGACACTACAGCTCTTGGGCTGATGCTCAGTTTATATCTGACAGATGGCAACTTCGGCAAGACAGAAATGTTATTGAAGTTATTGCTGGGTTATACCGG GGGATCAAAAATTGTTAGTCAGCTAATCACCAGTTTGACTAAAAAGGGAGAAATCAGTAAAGCAGAATCGCTTAACAATCAACTAATTAGGTTTGGCTAT GGAATGGATGAAGCCACTGCAGCTTCTTTAATTAGCCGTTACGGAAAACAACATATGCTGAAACAAGCTGAAGATATATTTGAAGCATATGTAAAGTCTC CTATATCTAGTAAACTATTATATAACTCTATGATTGATGCATATGCTAAATGTGGTGAACAAGGAAAAGCATATTTGCTTTATAAGCAAGCAAGAGAGGA AGGGCATGAACTGGGCGCAGTTGGAATTAGCATTGTCATAAATGCTTTAACAAATGAAGGTATGGTCATGGAATAATAAAGTAAACTTGAATCCGATCTT TATATCAACTTAACACATGCACAGGCAACACCTTGCTCTCTCATATGGTTCTAAAAACAGATGAAATACATTAGAACTTAGACCAATTCATGCAGTCTTT CGGGTTTGGAGTAAGACATAAATCCCAGTTATGTTAAATCTGCAATTTTTATCTGCTGAGTGTCAACTGATCGTGTTGTTGTTGCTGTGTCGACTGATCA TGTCATATGAATGACTTATTGTGAAATGTCTTTTTAAGAGCATACAGAATTGTTTGAAAATCAAACAATTGCTCTATTTATTTCAGGAAAAAAACAGAAA TTCTTGGGAGTGTCACGTGTTCTTTGTTGCATCTCCCTTTAGCAATTACCATTCAGTTATTTAGCATTTAATTGACAATTCTAAGCATTATTCTTTCTCA GGAAAGCACCAGGAGGCAGAGAATATTATCCGCAGGAGTCTCGAAGGAAACTCAGAGCTTGACACTGTGGCTTACAATACCTTCATCAAAGCCATGCTTG AAGCAGGCAAATTGCAATTTGCATCCAGTATATATGAGCACATGTGTTCTATCGGTGTTGCTCTGTCAATACAGACACTTAACACCATGATAAGTGTCTA CGGAAAAGATCAAAAGTTGGATAAAGCTGTGGATATGTTCAACAAGGGTCGCTCATTGGGTTTGCCTTTGGATGAAAAAGCATACATGAATTTGATCGGC TATTATGGGAAGGCTGGTATGATGGACGAAGCTTCCCAGTTGTTCATTAAAATGCAGGAAGAAGATATAAAACCTGGAATGGTCAGCTACAATATTATGA TCAATGTATATGCTAATGCTGGACTTCATCATGAAGCAGAGAAACTTTTCCTAGCCATGCAGAGACAATGTTGCTCGCCTGACTCTTTCACTTATCTTTC CCTTGTCCAAGCATATACAGTGAGCCAGAATTACTCTAAAGCTGAGGAAACAATACACGCCATGCGGAGCAAAGGCATTCCACCATCTTGTGCCCATTTT AATATTTTACTGTCTGCATTAGCAAAAGCGGGGCTGATCAGTGAGGCCAGGAGGATATATGAGCAACTGTCAGCTTTTGGTTTAGTTCCTGATCTCGTAT GTTACCGAACAATGGTGAAAGGTTACCTGGAACATGGATACGTGGAAGCAGGTATCGACTTTGTCGAGAGTATAAGCAAGTCAATAAAAGGAGACAGGTT CATCTTGAGTGCAGCTGTGCTTTTTTACAGATCTGCTGGAAATGAAGGGAAAGCTAAAGAAATATTGATTTCAATGAACCACTTGAAGGTCCCATTCCTG AAGAAACTTGTAGTTGGATCAAGAATGAAAGTCAAAACTCCTTGAGATACAAAATACTTTAGAAATGTATTTGTGTGCTTGAAAAGCAATTGTGGAGAAA GGCTGACTATGACTTATAGAAGGCATGTAAAAATCTAATCAGTCTGATAATGGTGATGGTGATACTGGTCCGAGTTAGCTGCAGTGTATCTCGGTCAATT AAATCCGGATATGCCGAAAGAACACAAGCTACTTGATTAAATGGAGTTGAACCAATGATATGCATGTGCCAACTATTGCATGGGGTGGATTGTGAGGGTT GTCTAGAATCCTTGACTGTTTGGTCCTAACTTTTTTCCTTACATTCTGGCTGAGCTAGACTGTAACAGGTATAACATTTCCCTCATACTGGGTTTACTGC AAATAGTGTAAAGAAAATTTAACATTTTCTCCCATAGTACACAGTTAAATCTTTTTCTATTTTGTATCATTGTATTGACTGATGTATCAATAATGACTTC AAAGTTATTCATTTTGTTACTGTTAATTATCAAATTAGAAAATATAATCACTATTTTAGATCTCATGCTATTTATATGAGATTGTCAATCTTTTACTATA TGCTTTGTGGGGTGTGCCAGTTTGGTTACTATGTGAAGATTAATCATTACTCAATGCAAAAATTGTGGTAGCACAAATTTTGTTAGCAGAC BLAST
Tissueflowers
Gene nameLI_gene_72075; 
Additional informationdetails; 

Expression of Ll_transcript_57241

Labels

FPAB abscising flower pedicels
FPNAB    non-abscising flower pedicels
LF1 lower flowers stage 1
LF2 lower flowers stage 2
LF3 lower flowers stage 3
LF4 lower flowers stage 4
UF1 upper flowers stage 1
UF2 upper flowers stage 2
UF3 upper flowers stage 3
UF4 upper flowers stage 4

Annotations of Ll_transcript_57241
BlastpPentatricopeptide repeat-containing protein At5g27270 from Arabidopsis with 53.86% of identity
BlastxPentatricopeptide repeat-containing protein At5g27270 from Arabidopsis with 53.58% of identity
EggnogPentatricopeptide repeat-containing protein(ENOG410Z7Z7)
KeggLink to kegg annotations (AT5G27270)
CantataDB-
Mirbase-
Ncbi proteinLink to NCBI protein (XP_019432635.1)
PfamPentatricopeptide repeat domain (PF13812.5)
Rfam-
GOLinks to GO: General; Genes and gene products; Annotations; Ontology;