Ll_transcript_57244

• Id Trinity: FTRINITY_DN57843_c1_g1_i2
• Name Transcript: Ll_transcript_57244
• Sequence: CACCTCTTTCCTCCCTCCACCTCTTAAACCCACAACCACCACCACCCCCACCACCACCAAACCCATCATTCCCAAAATCCACTCCTCTCTCCACCGCGAC CCATGGTCCCCCATCGACGGCGACATAACAAAACCCAAACCCAGAACAAAGGACCCAAGCAACCCTCTCTCCGACGACAACGCGCGCCGCATAATCAACG GCAAAGCTCGCTACCTAAGCGTCCTCAGAAGGAACCAGGGCCCTCAGGCTGAGACACCAAGGTGGATAAAGAGAAGCCCTGAACAAATGGTTCAGTACTT GGAGGATGATAGGAACGGACAACTCTATGGGAAGCATGTTGTTGCAGCGATTAAGAAAGTTAGGGCTTTGTCACAAAGGGTTGATGGTGAATATGAGATG AGAATGGTTATGGCAACTTTTGTTGGCAAACTTAGCTTCAGGGAAATGTGTGTTGTGCTTAAGGAGCAAAAGGGGTGGAGACAAGTTCGGGACTTTTTTG CTTGGATGAAATTGCAGCTGAGCTATCGCCCCACTGTTATTGTCTACACGATTGTATTGCGCTTATATGGGCAAGTTGGAAAGCTAAAACTGGCTGAAGA GACGTTCTTGGAGATGCTTGATGCAGGGTGTGAACCAGATGAAGTTGCTTGTGGTACCATGCTTTGTTCATATGCCAGATGGGGACGCGACAAGGCTATG TTTTCTTTTTATTCGGCGGTAAAAGAAAGGGGCATCATACTCCCTGTTGCCGTTTTCAACTTTATGTTGTCCTCTTTGCAAAAGAAATCACTCCATAGAC AGGTTGCACTATTGTGGATGGATATGATAGGAAAAGGGACGATACCTAATGCTTTTACGTATACAGTAGTCATCAGCTCGCTAATCAAAGAAGGGCTGCA TAAAGAAGCTTTAAGGACTTTCGATGAAATGAAGAATAATGGATTTGTTCCCGAGGAGGTAACTTATAGCCAGCTTATAACTTTAAGTGCTAAAAGTGGA AACAGGGATGAAGTGCTAAGACTGTATGATGATATGATGCTTCGAAGAATAGTTCCTAGTAATTACACTTGTGCTTCACTTCTGGCTCTGTATTACAAAT ACGAGGACTTCTCAAGAGCCCTCTCCCTCTTTTCGGAAATGGTAAGGAACAAAATTCCCGCTGATGAAGTTATATATGGTTTGCTTATAAGAATTTATGG AAAGCTTGGTTTATACGAGGATGCTCACAAGACATTTGAAGAGACAAAGCAGAAGGGCCTGTTGACCGATGAGAAAACATATTTGGCAATGGCACAAGTC CATCTTAGTTCAGGAAATGCAGACAAAGCTTTGGACACTATCGAGCTCATGAAGTTTAACAACGTATGGTTCTCTCGATTTGCTTATATTGTCCTGCTGC AATGTTATGTGATGAAAGAAGATGTAGAATCTGCTGAAGGATCATTTTTAGCTCTCTGCAAGACAGGACCACCTGATGCTGGTTCTTGTAATGATATGCT CAGTCTCTATATAAGACTTAATTTGATGAACAAGGCCAAGGAATTCATTGCCCGAATAAGGGAAGGTGATATACTTTTTGACGAGGTGCTTTATAGGATG GTTATGAAGGTTTATTGCAAGGAAGGAATGCTGCTAGAAGCTGAGCAATTGACAAATCGGATGGTTAAGAATGAATCTCTTAGAAAATATAAATTTGTCC AGACATTTTATTGGATTCTTTGTCAGTGTAAAGAGGATGTGCAATCTGATGATGAGCTGCTAGCCATTGAGCCTATCGACAAACTTGACACTACAGCTCT TGGGCTGATGCTCAGTTTATATCTGACAGATGGCAACTTCGGCAAGACAGAAATGTTATTGAAGTTATTGCTGGGTTATACCGGGGGATCAAAAATTGTT AGTCAGCTAATCACCAGTTTGACTAAAAAGGGAGAAATCAGTAAAGCAGAATCGCTTAACAATCAACTAATTAGGTTTGGCTATGGAATGGATGAAGCCA CTGCAGCTTCTTTAATTAGCCGTTACGGAAAACAACATATGCTGAAACAAGCTGAAGATATATTTGAAGCATATGTAAAGTCTCCTATATCTAGTAAACT ATTATATAACTCTATGATTGATGCATATGCTAAATGTGGTGAACAAGGAAAAGCATATTTGCTTTATAAGCAAGCAAGAGAGGAAGGGCATGAACTGGGC GCAGTTGGAATTAGCATTGTCATAAATGCTTTAACAAATGAAGGAAAGCACCAGGAGGCAGAGAATATTATCCGCAGGAGTCTCGAAGGAAACTCAGAGC TTGACACTGTGGCTTACAATACCTTCATCAAAGCCATGCTTGAAGCAGGCAAATTGCAATTTGCATCCAGTATATATGAGCACATGTGTTCTATCGGTGT TGCTCTGTCAATACAGACACTTAACACCATGATAAGTGTCTACGGAAAAGATCAAAAGTTGGATAAAGCTGTGGATATGTTCAACAAGGGTCGCTCATTG GGTTTGCCTTTGGATGAAAAAGCATACATGAATTTGATCGGCTATTATGGGAAGGCTGGTATGATGGACGAAGCTTCCCAGTTGTTCATTAAAATGCAGG AAGAAGATATAAAACCTGGAATGGTCAGCTACAATATTATGATCAATGTATATGCTAATGCTGGACTTCATCATGAAGCAGAGAAACTTTTCCTAGCCAT GCAGAGACAATGTTGCTCGCCTGACTCTTTCACTTATCTTTCCCTTGTCCAAGCATATACAGTGAGCCAGAATTACTCTAAAGCTGAGGAAACAATACAC GCCATGCGGAGCAAAGGCATTCCACCATCTTGTGCCCATTTTAATATTTTACTGTCTGCATTAGCAAAAGCGGGGCTGATCAGTGAGGCCAGGAGGATAT ATGAGCAACTGTCAGCTTTTGGTTTAGTTCCTGATCTCGTATGTTACCGAACAATGGTGAAAGGTTACCTGGAACATGGATACGTGGAAGCAGGTATCGA CTTTGTCGAGAGTATAAGCAAGTCAATAAAAGGAGACAGGTTCATCTTGAGTGCAGCTGTGCTTTTTTACAGATCTGCTGGAAATGAAGGGAAAGCTAAA GAAATATTGATTTCAATGAACCACTTGAAGGTCCCATTCCTGAAGAAACTTGTAGTTGGATCAAGAATGAAAGTCAAAACTCCTTGAGATACAAAATACT TTAGAAATGTATTTGTGTGCTTGAAAAGCAATTGTGGAGAAAGGCTGACTATGACTTATAGAAGGCATGTAAAAATCTAATCAGTCTGATAATGGTGATG GTGATACTGGTCCGAGTTAGCTGCAGTGTATCTCGGTCAATTAAATCCGGATATGCCGAAAGAACACAAGCTACTTGATTAAATGGAGTTGAACCAATGA TATGCATGTGCCAACTATTGCATGGGGTGGATTGTGAGGGTTGTCTAGAATCCTTGACTGTTTGGTCCTAACTTTTTTCCTTACATTCTGGCTGAGCTAG ACTGTAACAGGTATAACATTTCCCTCATACTGGGTTTACTGCAAATAGTGTAAAGAAAATTTAACATTTTCTCCCATAGTACACAGTTAAATCTTTTTCT ATTTTGTATCATTGTATTGACTGATGTATCAATAATGACTTCAAAGTTATTCATTTTGTTACTGTTAATTATCAAATTAGAAAATATAATCACTATTTTA GATCTCATGCTATTTATATGAGATTGTCAATCTTTTACTATATGCTTTGTGGGGTGTGCCAGTTTGGTTACTATGTGAAGATTAATCATTACTCAATGCA AAAATTGTGGTAGCACAAATTTTGTTAGCAGAC
• Tissue: flowers
• Gene name: LI_gene_72075;
• Additional information: details;

Expression of Ll_transcript_57244

FPKM

• FPAB: 0.8
• FPNAB: 1.7
• LF1: 2.7
• LF2: 2.9
• LF3: 2.9
• LF4: 1.1
• UF1: 1.6
• UF2: 2.1
• UF3: 2.6
• UF4: 1.6

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_57244

• Blastp: Pentatricopeptide repeat-containing protein At5g27270 from Arabidopsis with 56.38% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g27270 from Arabidopsis with 57.62% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G27270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432635.1)
• Pfam: Pentatricopeptide repeat domain (PF13812.5)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;