Ll_transcript_57245

• Id Trinity: FTRINITY_DN57843_c1_g1_i3
• Name Transcript: Ll_transcript_57245
• Sequence: TTTTTGCTTGGATGAAATTGCAGAGATTGATACTATGAATTGACAGTCTGGTGCTTCAACAGCTGAGCTATCGCCCCACTGTTATTGTCTACACGATTGT ATTGCGCTTATATGGGCAAGTTGGAAAGCTAAAACTGGCTGAAGAGACGTTCTTGGAGATGCTTGATGCAGGGTGTGAACCAGATGAAGTTGCTTGTGGT ACCATGCTTTGTTCATATGCCAGATGGGGACGCGACAAGGCTATGTTTTCTTTTTATTCGGCGGTAAAAGAAAGGGGCATCATACTCCCTGTTGCCGTTT TCAACTTTATGTTGTCCTCTTTGCAAAAGAAATCACTCCATAGACAGGTTGCACTATTGTGGATGGATATGATAGGAAAAGGGACGATACCTAATGCTTT TACGTATACAGTAGTCATCAGCTCGCTAATCAAAGAAGGGCTGCATAAAGAAGCTTTAAGGACTTTCGATGAAATGAAGAATAATGGATTTGTTCCCGAG GAGGTAACTTATAGCCAGCTTATAACTTTAAGTGCTAAAAGTGGAAACAGGGATGAAGTGCTAAGACTGTATGATGATATGATGCTTCGAAGAATAGTTC CTAGTAATTACACTTGTGCTTCACTTCTGGCTCTGTATTACAAATACGAGGACTTCTCAAGAGCCCTCTCCCTCTTTTCGGAAATGGTAAGGAACAAAAT TCCCGCTGATGAAGTTATATATGGTTTGCTTATAAGAATTTATGGAAAGCTTGGTTTATACGAGGATGCTCACAAGACATTTGAAGAGACAAAGCAGAAG GGCCTGTTGACCGATGAGAAAACATATTTGGCAATGGCACAAGTCCATCTTAGTTCAGGAAATGCAGACAAAGCTTTGGACACTATCGAGCTCATGAAGT TTAACAACGTATGGTTCTCTCGATTTGCTTATATTGTCCTGCTGCAATGTTATGTGATGAAAGAAGATGTAGAATCTGCTGAAGGATCATTTTTAGCTCT CTGCAAGACAGGACCACCTGATGCTGGTTCTTGTAATGATATGCTCAGTCTCTATATAAGACTTAATTTGATGAACAAGGCCAAGGAATTCATTGCCCGA ATAAGGGAAGGTGATATACTTTTTGACGAGGTGCTTTATAGGATGGTTATGAAGGTTTATTGCAAGGAAGGAATGCTGCTAGAAGCTGAGCAATTGACAA ATCGGATGGTTAAGAATGAATCTCTTAGAAAATATAAATTTGTCCAGACATTTTATTGGATTCTTTGTCAGTGTAAAGAGGATGTGCAATCTGATGATGA GCTGCTAGCCATTGAGCCTATCGACAAACTTGACACTACAGCTCTTGGGCTGATGCTCAGTTTATATCTGACAGATGGCAACTTCGGCAAGACAGAAATG TTATTGAAGTTATTGCTGGGTTATACCGGGGGATCAAAAATTGTTAGTCAGCTAATCACCAGTTTGACTAAAAAGGGTATGATGTCTTATTGTCTGATAT GAAAATGATTATAACTCATTAAGCAAAATTCTCTTCCTGTGATACCTTCCTTGAATTAAATTTATTTCCTTTTCCAGGAGAAATCAGTAAAGCAGAATCG CTTAACAATCAACTAATTAGGTTTGGCTATGGAATGGATGAAGCCACTGCAGCTTCTTTAATTAGCCGTTACGGAAAACAACATATGCTGAAACAAGCTG AAGATATATTTGAAGCATATGTAAAGTCTCCTATATCTAGTAAACTATTATATAACTCTATGATTGATGCATATGCTAAATGTGGTGAACAAGGAAAAGC ATATTTGCTTTATAAGCAAGCAAGAGAGGAAGGGCATGAACTGGGCGCAGTTGGAATTAGCATTGTCATAAATGCTTTAACAAATGAAGGAAAGCACCAG GAGGCAGAGAATATTATCCGCAGGAGTCTCGAAGGAAACTCAGAGCTTGACACTGTGGCTTACAATACCTTCATCAAAGCCATGCTTGAAGCAGGCAAAT TGCAATTTGCATCCAGTATATATGAGCACATGTGTTCTATCGGTGTTGCTCTGTCAATACAGACACTTAACACCATGATAAGTGTCTACGGAAAAGATCA AAAGTTGGATAAAGCTGTGGATATGTTCAACAAGGGTCGCTCATTGGGTTTGCCTTTGGATGAAAAAGCATACATGAATTTGATCGGCTATTATGGGAAG GCTGGTATGATGGACGAAGCTTCCCAGTTGTTCATTAAAATGCAGGAAGAAGATATAAAACCTGGAATGGTCAGCTACAATATTATGATCAATGTATATG CTAATGCTGGACTTCATCATGAAGCAGAGAAACTTTTCCTAGCCATGCAGAGACAATGTTGCTCGCCTGACTCTTTCACTTATCTTTCCCTTGTCCAAGC ATATACAGTGAGCCAGAATTACTCTAAAGCTGAGGAAACAATACACGCCATGCGGAGCAAAGGCATTCCACCATCTTGTGCCCATTTTAATATTTTACTG TCTGCATTAGCAAAAGCGGGGCTGATCAGTGAGGCCAGGAGGATATATGAGCAACTGTCAGCTTTTGGTTTAGTTCCTGATCTCGTATGTTACCGAACAA TGGTGAAAGGTTACCTGGAACATGGATACGTGGAAGCAGGTATCGACTTTGTCGAGAGTATAAGCAAGTCAATAAAAGGAGACAGGTTCATCTTGAGTGC AGCTGTGCTTTTTTACAGATCTGCTGGAAATGAAGGGAAAGCTAAAGAAATATTGATTTCAATGAACCACTTGAAGGTCCCATTCCTGAAGAAACTTGTA GTTGGATCAAGAATGAAAGTCAAAACTCCTTGAGATACAAAATACTTTAGAAATGTATTTGTGTGCTTGAAAAGCAATTGTGGAGAAAGGCTGACTATGA CTTATAGAAGGCATGTAAAAATCTAATCAGTCTGATAATGGTGATGGTGATACTGGTCCGAGTTAGCTGCAGTGTATCTCGGTCAATTAAATCCGGATAT GCCGAAAGAACACAAGCTACTTGATTAAATGGAGTTGAACCAATGATATGCATGTGCCAACTATTGCATGGGGTGGATTGTGAGGGTTGTCTAGAATCCT TGACTGTTTGGTCCTAACTTTTTTCCTTACATTCTGGCTGAGCTAGACTGTAACAGGTATAACATTTCCCTCATACTGGGTTTACTGCAAATAGTGTAAA GAAAATTTAACATTTTCTCCCATAGTACACAGTTAAATCTTTTTCTATTTTGTATCATTGTATTGACTGATGTATCAATAATGACTTCAAAGTTATTCAT TTTGTTACTGTTAATTATCAAATTAGAAAATATAATCACTATTTTAGATCTCATGCTATTTATATGAGATTGTCAATCTTTTACTATATGCTTTGTGGGG TGTGCCAGTTTGGTTACTATGTGAAGATTAATCATTACTCAATGCAAAAATTGTGGTAGCACAAATTTTGTTAGCAGAC
• Tissue: flowers
• Gene name: LI_gene_72075;
• Additional information: details;

Expression of Ll_transcript_57245

FPKM

• FPAB: 0
• FPNAB: 0
• LF1: 0
• LF2: 0.2
• LF3: 0.1
• LF4: 0
• UF1: 0.4
• UF2: 0
• UF3: 0.1
• UF4: 0.1

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_57245

• Blastp: Pentatricopeptide repeat-containing protein At5g27270 from Arabidopsis with 51.36% of identity
• Blastx: Pentatricopeptide repeat-containing protein At5g27270 from Arabidopsis with 56.57% of identity
• Eggnog: Pentatricopeptide repeat-containing protein(ENOG410Z7Z7)
• Kegg: Link to kegg annotations (AT5G27270)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019432635.1)
• Pfam: PPR repeat (PF01535.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;