Ll_transcript_57248

• Id Trinity: FTRINITY_DN57843_c1_g3_i3
• Name Transcript: Ll_transcript_57248
• Sequence: CAAAAACAAAAAACTAAGGTATATGACAAATAGTTTTGAGGAACCAAAGAACAAAGCACATTTTCGTGTTTCAATTGTGAAAAGTGCAAAAGCAGGGAAA GGAGAATGTTGATTGTGACTTCGTGAGAACTAAGAAAGAAGCATAAACGGTAGTGCTTTGATTCTATTGGATTGTTGGGTAGTGATTCAGATTTTGAACG TGCGCAACACTATTGCATTACGTCTCAACAAGATCCATTTGAATCATAATCATTCTTCATCACAAACCCTTGAATCTAAAGAAAAAAGCAATTTTGAAAA ATTGGTTTTGTAATTCAAGCCATTTAAGACGTGGGTTTCGAAATTCAAGCCAGTTCGTTGATGGGTTTTTAAATTGAAGCCATTCCATTGATGGGTTTTT GAAGGAATCTGAAGAATTTTTTTTTCAATGTTGGAAAGCGATCAGAATCGTCTTCTGGGTTCGTCGGAAGATGCGGAGCACGACGTGGAAGCTCAAACAT CCGAAATCAATGGCGGAAGAGGGTTGAGGGATTTGCTTAGATTGAAAAGGTTAGAGAAAGAAGGAGAAATAAGAGATCGAAATAGTTATAATCATAATCA TAATTCACATTCGCATATGGATCTTCATGATGATGATGATTCTTCGCTTGGAGATAGTGCACCTCCTGAATGGGTATTGCTCCTTCTTGGTTGCCTCCTT GGTCTTGCGACTGGACTCTTTGTTGCTGCTTTCAATAAAGGGGTGCATCTAATACATGAATGGGCCTGGGCTGGTACTCCAAATGAGGGTGCTGCTTGGC TTCGTTTGCAAAGATTGGCTGATACATGGCATCGAATCCTGTTGATTCCTGTGTTTGGAGGAGTCATTGTTGGAATGATGCATGGCTTACTGGAAATACT TGACCAAATAAAGCAGTCCAGTTCCTCTCAAAGACAAGGTTTAGACTTGCTTTCAGGAGTCTATCCAACAATAAAGGCTATCCAGGCTGCAGTTACTTTA GGCACTGGCTGTTCTTTGGGTCCTGAAGGTCCTAGTGTTGATATTGGAAAGTCATGTGCGACTGGATTTTCATTAATGATGGAAAACAACAGAGAAAGGA AAATAGCACTTGTTGCAGCCGGTGCAGCAGCTGGAATTTCTTCAGGTTTCAATGCAGCAGTTGCTGGTTGTTTCTTTGCTATTGAAACTGTGCTGAGGCC ACTTCGTGCAGAGAACTCTCCCCCATTTACAACTGCCATGATTATATTAGCATCTGTTATCTCATCAACTGTATCAAATGTTTTACTGGGAACTGAATCA GCTTTTACAGTGCCTGCATATGATCTTAAATCTGCTGCTGAGCTACCTTTATACCTGATTTTGGGAATGCTATGTGGTGTTGTAAGTGTGGCCATGAGTC GTTTGGTTGCTTGGTTCACCAAATTGTTTGAGCTTATCCAGGAAACATTTGATCTTCCTACCGTGGTATGCCCTGCTTTAGGTGGTTTAGGAGCTGGGAT CATTGCTCTTAAATATCCTGGAATATTGTATTGGGGTTTCACAAATGTGGAAGAAATTCTACATACAGGAAAGAGTGCTTCAGCTCCGGGAATATGGTTG TTGGCTCAATTGGCAGCTGCAAAAGTTATCGCGACAGCTCTTTGCAAGGGATCTGGACTTGTAGGTGGTCTTTATGCACCGAGTTTAATGATTGGTGCTG CAGTTGGTGCTGTATTTGGAGGCTTTGCTGCTGAAGTTATCAATTCAGCAATTCCTGGAAATGCTGCTGTTGCCCAACCCCAGGCATATGCTCTGGTTGG AATGGCTGCTACATTAGCATCTGTTTGTTCAGTTCCCTTGACGTCAGTTCTACTTCTGTTTGAGCTGACAAAAGATTATAGGATACTGCTTCCTCTCATG GGGGCTGTTGGATTGGCAATATGGGTTCCCTCTGTGACAAACCAGACAAAGGAGAGTGATACATCTGATACAAGAAACATAGCGCGGGGATATTCTTCAA TTTCACATGCTGAAGATAATGAAGGTAACTGGAGAGAAGCCAATAACGAGGATGGTTTAGAACTCAGTGTTATTGAAGATGCTGCTGATCTTGAATTAGT TGATGAGGAACTGCTTCTGGAAAATCTCAAGGTTTATCATGCCATGTCTAAAAATTATCTGAAGGTTTCAAGACATGCAACCCTGAAAGATGCAATCAAA TGCATTCATGATAGCCAGCAGAATTGTGTGCTTGTGGTTGACGAGGATGATTTTCTAGAAGGAATATTGACATATGGTGACATTAGAAGGTGTATGCCTG AGAATTCTAATGTCACATCCAAGAGTGATTCAAGGCTTGTGGATGACACATGCCTTGTTTCCTCTGTTTGTACTCGAGGGATGAGCTATCGGGGACGAGA GCGTGGACTTTTAACATGTTACCCAAATACTAGTTTGGCTATGGCCAAAGAGGTAATGGAGGCCAGGGGTATTAAG
• Tissue: flowers
• Gene name: LI_gene_72077;
• Additional information: details;

Expression of Ll_transcript_57248

FPKM

• FPAB: 7.1
• FPNAB: 7.1
• LF1: 6.6
• LF2: 4.9
• LF3: 4.2
• LF4: 4.2
• UF1: 5
• UF2: 5.3
• UF3: 4.9
• UF4: 4.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_57248

• Blastp: Chloride channel protein CLC-f from Arabidopsis with 70.7% of identity
• Blastx: Chloride channel protein CLC-f from Arabidopsis with 79.38% of identity
• Eggnog: chloride channel(COG0038)
• Kegg: Link to kegg annotations (AT1G55620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019421073.1)
• Pfam: Voltage gated chloride channel (PF00654.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;