Ll_transcript_57253

• Id Trinity: FTRINITY_DN57843_c1_g3_i7
• Name Transcript: Ll_transcript_57253
• Sequence: CAAAAACAAAAAACTAAGGTATATGACAAATAGTTTTGAGGAACCAAAGAACAAAGCACATTTTCGTGTTTCAATTGTGAAAAGTGCAAAAGCAGGGAAA GGAGAATGTTGATTGTGACTTCGTGAGAACTAAGAAAGAAGCATAAACGGTAGTGCTTTGATTCTATTGGATTGTTGGGTAGTGATTCAGATTTTGAACG TGCGCAACACTATTGCATTACGTCTCAACAAGATCCATTTGAATCATAATCATTCTTCATCACAAACCCTTGAATCTAAAGAAAAAAGCAATTTTGAAAA ATTGGTTTTGTAATTCAAGCCATTTAAGACGTGGGTTTCGAAATTCAAGCCAGTTCGTTGATGGGTTTTTAAATTGAAGCCATTCCATTGATGGGTTTTT GAAGGAATCTGAAGAATTTTTTTTTCAATGTTGGAAAGCGATCAGAATCGTCTTCTGGGTTCGTCGGAAGATGCGGAGCACGACGTGGAAGCTCAAACAT CCGAAATCAATGGCGGAAGAGGGTTGAGGGATTTGCTTAGATTGAAAAGGTTAGAGAAAGAAGGAGAAATAAGAGATCGAAATAGTTATAATCATAATCA TAATTCACATTCGCATATGGATCTTCATGATGATGATGATTCTTCGCTTGGAGATAGTGCACCTCCTGAATGGGTATTGCTCCTTCTTGGTTGCCTCCTT GGCCTAGCCACTGGACTCTTTGTTGCTGCTTTCAATAAAGGGGTGCATCTAATACATGAATGGGCCTGGGCTGGTACTCCAAATGAGGGTGCTGCTTGGC TTCGTTTGCAAAGATTGGCTGATACATGGCATCGAATCCTTTTGATACCTGTCTTTGGAGGAGTCATTGTTGGCATGATGCATGGCTTACTAGAAATACT TGACCAAATAAAGCAGTCTAGTTCCTCTCAAAGGCAAGGTTTTGATTTGCTTTCGGGAGTCTATCCGACAATAAAGGCTATCCAGGCTGCAGTTACTTTA GGTACCGGCTGTTCTTTGGGTCCTGAAGGTCCTAGTGTTGATATTGGAAAGTCATGTGCCGCTGGATTCTCATTAATGATGGAAAACAACAGAGAAAGAA AAATAGCACTTGTTGCGGCTGGTGCAGCAGCTGGAATTTCTTCAGGCTTCAATGCAGCAGTTGCGGGTTGTTTCTTTGCTATTGAAACCGTGCTGAGGCC ACTTCGTGCAGAGAATTCTCCCCCATTTACAACCGCAATGATTATATTGGCTTCTGTTATCTCATCGACTGTATCAAATGTTTTACTGGGAACTGAATCA GCTTTTACAGTGCCTGCATATGATCTTAAATCTGCTGCTGAGCTACCTTTATATCTGATATTGGGAATGCTATGTGGTGTTGTAAGTGTGGCCATGAGTC GTTTGGTTGCTTGGTTCACCAAATTGTTTGAGGTTATCCAGGAGAGATTCGACCTTCCTGCTGTGGTATGCCCTGCTTTAGGTGGTTTAGGAGCTGGGAT CATTGCTCTTAAATATCCTGGAATATTGTATTGGGGTTTCACAAATGTGGAAGAAATTCTACATACCGGAAAGAGTGCTTCAGCTCCTGGAATATGGTTG TTGACACAATTAGCAGCTGCAAAGGTTATCGCGACAGCTCTTTGCAAGGGATCTGGACTTGTAGGTGGTCTTTATGCACCGAGTTTAATGATTGGTGCTG CAGTTGGTGCTGTATTTGGAGGGTTTGCAGCTGAAGTTATCAATTCGGCAATTCCTGGAAATGCTGCTGTTGCCCAACCCCAGGCATATGCTCTGGTTGG AATGGCTGCTACATTAGCATCTGTTTGTTCAGTTCCCTTGACGTCAGTTCTACTTCTGTTTGAGCTGACAAAAGATTACAGGATATTGCTTCCTCTCATG GGGGCTGTTGGATTGGCAATATGGGTTCCCTCAGTGACAAACCAGACGAAGGAGAGTGATACACCTGATACAAGAAACTCAGCAAGAGGATATTCTTCAA TTTTGCGTGCTGAAGATAATGAAGGTAACTGGAGAGAAGCCCACAACGGGGATGGTTTAGAACTCGGTGTTATTGAAGATGCTGCTAATCTTGAATTAGT TGATGAGGAACTGCTTCTGGAAAATCTTAAGGTCTCTCAGGCCATGTCTAAGAACTATCTGAAGGTTTTATCATCTGTAACCCTGAAAGATGCAATCAAA TGCATTCGTGACAGCCAGCAGAATTGTGTGCTAGTGGTTGACGAGGAGGATTTTCTAGAAGGAATATTGACATACGGTGACATTAGAAGGTGTCTGCCCG AGAACTCTAGTGATACTTCCAAGAGTGGTTCAAGGCTTCTGGATGACACATGCCTTGTTTCTTCTGTTTGTACTCGAGGGATGAGCTACCGCGGACGAGA GCGTGGACTTCTAACATGTTACCCAAATACTAGTTTGGCTATGGCCAAAGAGGTAATGGAGGCCAGGGGTATTAAGCAATTACCAGTGGTTAAACATGGT GTAGATCAAAGTCGAGAGCGGAAGCGAAGAGTCGTTGGTCTTCTTCATTATAACGCACTATGGATTTGTCTCAGGAAAGAGATTAATCACAGGAAGTTAG CCTATCAAAATAGGACAGAAAAGAATGTGGCTGTGGTAACTATAAATGGACATTAACTCTGATCAAGAAGCTTCATGTGAAAAAAATTAGTAAAGCCAGG TTGTAGAAATTTGCACTTGTGAAGTTAAAAGTAGAGACTATGTAAGTTACATGTATATTTTTTAGTGCCACAAGTTGGGTTATATTTCATAAGAAACTAA ATATTTCCAACCCTCACGCGTTAAGGAATCAATCCATCCAAATCAACCTCATATTGAGTTTTAATATAAGGTTTACTACATGGATCGAATGATGATTTTA TCGTAAATCACGTTTGTTGACTTTACGAAGCAAATGACTAGTTGAATACAATGGGAGATAAAAATTGAGTTCAAACCAAAATTATATATACTCAACATGC CCATTTGGCTTCAAATTCATTGTAATTCTCTCCTATATCTTTCTTGAACTCTATTTGTCTATATGAATTGAATTATCT
• Tissue: flowers
• Gene name: LI_gene_72077;
• Additional information: details;

Expression of Ll_transcript_57253

FPKM

• FPAB: 5.2
• FPNAB: 6.5
• LF1: 6.7
• LF2: 10.7
• LF3: 8.8
• LF4: 6.4
• UF1: 5.1
• UF2: 8.8
• UF3: 8.3
• UF4: 6.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_57253

• Blastp: Chloride channel protein CLC-f from Arabidopsis with 68.19% of identity
• Blastx: Chloride channel protein CLC-f from Arabidopsis with 75.67% of identity
• Eggnog: chloride channel(COG0038)
• Kegg: Link to kegg annotations (AT1G55620)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019440919.1)
• Pfam: Voltage gated chloride channel (PF00654.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;