| Id Trinity | FTRINITY_DN57843_c1_g3_i9 |
|---|---|
| Name Transcript | Ll_transcript_57260 |
| Sequence | CAAAAACAAAAAACTAAGGTATATGACAAATAGTTTTGAGGAACCAAAGAACAAAGCACATTTTCGTGTTTCAATTGTGAAAAGTGCAAAAGCAGGGAAA GGAGAATGTTGATTGTGACTTCGTGAGAACTAAGAAAGAAGCATAAACGGTAGTGCTTTGATTCTATTGGATTGTTGGGTAGTGATTCAGATTTTGAACG TGCGCAACACTATTGCATTACGTCTCAACAAGATCCATTTGAATCATAATCATTCTTCATCACAAACCCTTGAATCTAAAGAAAAAAGCAATTTTGAAAA ATTGGTTTTGTAATTCAAGCCATTTAAGACGTGGGTTTCGAAATTCAAGCCAGTTCGTTGATGGGTTTTTAAATTGAAGCCATTCCATTGATGGGTTTTT GAAGGAATCTGAAGAATTTTTTTTTCAATGTTGGAAAGCGATCAGAATCGTCTTCTGGGTTCGTCGGAAGATGCGGAGCACGACGTGGAAGCTCAAACAT CCGAAATCAATGGCGGAAGAGGGTTGAGGGATTTGCTTAGATTGAAAAGGTTAGAGAAAGAAGGAGAAATAAGAGATCGAAATAGTTATAATCATAATCA TAATTCACATTCGCATATGGATCTTCATGATGATGATGATTCTTCGCTTGGAGATAGTGCACCTCCTGAATGGGTATTGCTCCTTCTTGGTTGCCTCCTT GGCCTAGCCACTGGACTCTTTGTTGCTGCTTTCAATAAAGGGGTGCATCTAATACATGAATGGGCCTGGGCTGGTACTCCAAATGAGGGTGCTGCTTGGC TTCGTTTGCAAAGATTGGCTGATACATGGCATCGAATCCTTTTGATACCTGTCTTTGGAGGAGTCATTGTTGGCATGATGCATGGCTTACTAGAAATACT TGACCAAATAAAGCAGTCTAGTTCCTCTCAAAGGCAAGGTTTTGATTTGCTTTCGGGAGTCTATCCGACAATAAAGGCTATCCAGGCTGCAGTTACTTTA GGTACCGGCTGTTCTTTGGGTCCTGAAGGTCCTAGTGTTGATATTGGAAAGTCATGTGCCGCTGGATTCTCATTAATGATGGAAAACAACAGAGAAAGAA AAATAGCACTTGTTGCGGCTGGTGCAGCAGCTGGAATTTCTTCAGGCTTCAATGCAGCAGTTGCGGGTTGTTTCTTTGCTATTGAAACCGTGCTGAGGCC ACTTCGTGCAGAGAATTCTCCCCCATTTACAACCGCAATGATTATATTGGCTTCTGTTATCTCATCGACTGTATCAAATGTTTTACTGGGAACTGAATCA GCTTTTACAGTGCCTGCATATGATCTTAAATCTGCTGCTGAGCTACCTTTATATCTGATATTGGGAATGCTATGTGGTGTTGTAAGTGTGGCCATGAGTC GTTTGGTTGCTTGGTTCACCAAATTGTTTGAGGTTATCCAGGAGAGATTCGACCTTCCTGCTGTGGTATGCCCTGCTTTAGGTGGTTTAGGAGCTGGGAT CATTGCTCTTAAATATCCTGGAATATTGTATTGGGGTTTCACAAATGTGGAAGAAATTCTACATACCGGAAAGAGTGCTTCAGCTCCTGGAATATGGTTG TTGACACAATTAGCAGCTGCAAAGGTTATCGCGACAGCTCTTTGCAAGGGATCTGGACTTGTAGGTGGTCTTTATGCACCGAGTTTAATGATTGGTGCTG CAGTTGGTGCTGTATTTGGAGGGTTTGCAGCTGAAGTTATCAATTCGGCAATTCCTGGAAATGCTGCTGTTGCCCAACCCCAGGCATATGCTCTGGTTGG AATGGCTGCTACATTAGCATCTGTTTGTTCAGTTCCCTTGACGTCAGTTCTACTTCTGTTTGAGCTGACAAAAGATTACAGGATATTGCTTCCTCTCATG CATTTTGTAATATCCAGAACTTGTGAGCAGTGGTGTTTTAAGAACCCGAGAACAGGAGGTGCAAATTGCATTGAATTGTCCAAAATGTATCAGAATAGGA CAAATGGAGTGACATGGGTGCAATTATATATATCCGGGGGTGCAAACAATATTAACTATAAGGGCAATGTATAATTTTTTCCAGGTACAGGTGGCTCTGC CACAGCTTGTGGACTTGAACCTTAACCTTCTTTTGTTCTGCAGTTTTCTATCACCCTTGAATTTTACTTCACACAACTTTTTACCTTTATTCTAGTGAAA ACTGCTAAGGTTCAATATTTTCATTTCGTGTAATTGTGAACCTTGCACTCAGGGGGCTGTTGGATTGGCAATATGGGTTCCCTCAGTGACAAACCAGACG AAGGAGAGTGATACACCTGATACAAGAAACTCAGCAAGAGGATATTCTTCAATTTTGCGTGCTGAAGATAATGAAGGTAACTGGAGAGAAGCCCACAACG GGGATGGTTTAGAACTCGGTGTTATTGAAGATGCTGCTAATCTTGAATTAGTTGATGAGGAACTGCTTCTGGAAAATCTTAAGGTCTCTCAGGCCATGTC TAAGAACTATCTGAAGGTTTTATCATCTGTAACCCTGAAAGATGCAATCAAATGCATTCGTGACAGCCAGCAGAATTGTGTGCTAGTGGTTGACGAGGAG GATTTTCTAGAAGGAATATTGACATACGGTGACATTAGAAGGTGTCTGCCCGAGAACTCTAGTGATACTTCCAAGAGTGGTTCAAGGCTTCTGGATGACA CATGCCTTGTTTCTTCTGTTTGTACTCGAGGGATGAGCTACCGCGGACGAGAGCGTGGACTTCTAACATGTTACCCAAATACTAGTTTGGCTATGGCCAA AGAGGTAATGGAGGCCAGGGGTATTAAGCAATTACCAGTGGTTAAACATGGTGTAGATCAAAGTCGAGAGCGGAAGCGAAGAGTCGTTGGTCTTCTTCAT TATAACGCACTATGGATTTGTCTCAGGAAAGAGATTAATCACAGGAAGTTAGCCTATCAAAATAGGACAGAAAAGAATGTGGCTGTGGTAACTATAAATG GACATTAACTCTGATCAAGAAGCTTCATGTGAAAAAAATTAGTAAAGCCAGGTTGTAGAAATTTGCACTTGTGAAGTTAAAAGTAGAGACTATGTAAGTT ACATGTATATTTTTTAGTGCCACAAGTTGGGTTATATTTCATAAGAAACTAAATATTTCCAACCCTCACGCGTTAAGGAATCAATCCATCCAAATCAACC TCATATTGAGTTTTAATATAAGGTTTACTACATGGATCGAATGATGATTTTATCGTAAATCACGTTTGTTGACTTTACGAAGCAAATGACTAGTTGAATA CAATGGGAGATAAAAATTGAGTTCAAACCAAAATTATATATACTCAACATGCCCATTTGGCTTCAAATTCATTGTAATTCTCTCCTATATCTTTCTTGAA CTCTATTTGTCTATATGAATTGAATTATCT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72077; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_57260
| Blastp | Chloride channel protein CLC-f from Arabidopsis with 75.47% of identity |
|---|---|
| Blastx | Chloride channel protein CLC-f from Arabidopsis with 89.47% of identity |
| Eggnog | chloride channel(COG0038) |
| Kegg | Link to kegg annotations (AT1G55620) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019421073.1) |
| Pfam | Voltage gated chloride channel (PF00654.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |