| Id Trinity | FTRINITY_DN57847_c1_g2_i7 |
|---|---|
| Name Transcript | Ll_transcript_57840 |
| Sequence | AAAGGCAGCAAAACCTATCCAGTAGTATCTACTATCCACGCTGGCCTTGCACATCCTCTCAATGTCATTAGAAATAGACAGTATTTTTTTCTTCAAACGG CCGATACGCTTTTCAGCGGACTTGGTAAATCAACCTTCATAACTCAACAGATGAGAGATCCAGTAACATGCGTGCTTGCACACTCTCTCCTATATTATAT TCCTAACCAATCAATCAGAATCACCAACAAAGGAATTTGTCAGCTTAGATTGTGAAATATGGGTGGCGATGGAAAGAAACACAAGTGGAAAATCTCCTTT CACCGTTCCTCTTCTAAATCCAAATTGGAACAAAAAACACCTCCCAAAGAATTCATATGCCCCATTTCCAAGTCATTAATGTCTGATCCGGTTGTCGTGT CTTCGGGTCAGACCTTCGAACGCGTTGCTGTTCAAGTCTGCATAGATTTAAACTTTTCCCCAATTCTTGAAAACGGGTCCCGACCCGATTTCTCAACTGT GATCCCTAATTTAGCGATCAAAACTACTATCCTCAATTGGTGCAACAAGTCCCACACCGAGCACCCGCATGCACCGGATTATGCTTCTTTGGAGAGCCTT GTCCGTGAAAAGATGGCGGCGGAGGCGCCGCAGGTGGAAGAACGAATTAGGGTTTCTGAGAAGGAGCTTTTGAACGCTGTAGCGGAAAATCCGCAGGTGA ATTTCTCTCACGCTGCAACTGAGTTAGGTACCCGAATCAACCACTTCGATTCTGGATCCTCTGTGGAATCGGTGATCATTGGAGAAAGCCATGGCACGCC GTTACCTTTCACGATTCGACCTACGTGCTTGTCTTCCAATTCTTCCTCATCAATTGAAATCAGTGAGATCGAAATTCTAAAACCTAGCGGCGAAGTCACC GAAGAGGAGGAGAAATTGTTAACGAAATTGACAAGCAGCGAGGTTTTCGAGCAAGAAGAAGGTGTGATTTCACTGAGAAGCATCACGAGGAACAACGAAG AAGCTCGGTTTTCTTTTTGCACGCAACGATTGCTTTTTGTACTGCGTTTGTTAATTCAATCGCGATACACCGTCGTTCAGGTCAACGCATTTGCTTCGTT AGTCAACCTTTCTCTCGAGAAGCGAAACAAGGTGAAGATCGTGCGGTCAGGATTTGTTCCATTACTCATCGACGCTTTAAAGGCCGGATCCTCTGAAACG CAGGAACACGCTGCGGGTGCACTCTTCAGTTTAGTGTTAGATGATGATAACAAAATGGCAATTGGTGTTCTGGGCGCGTTGCAGCCACTAATGTACGCAC TGAGATTGGATTCCGAGCGAACTAGTCATGACTCAGCACTCGCATTGTACCATTTGACTCTTGTACAAACCAACCGAGTCAAGCTTATTAAACTCGCAGC AATCCCCGCTCTTCTCTCATTGGTGAAATCGAATACAAGGGATTTGGCAAGTCGTGTGTTGTTAATTCTGTGTAACCTTGCGGCGTGTGTTGAGGGACAA ACGGCGATGCTGGACGCCAACGCGGTGGAGTGTTTGGTGGGTTTGCTGAGGGAAAACGAGTTGAACTCGGAGTCAACTCGGGAGAATTGCGTGGCGGCGT TGTCCGTGCTGAGTCTTCGGAGTTTGAGGTTTAAAGGGTTGGCGAAGGAGGCGGGGGCGGTGGAAGTGTTGAAGGAGATTGAGAAAACAGGAACGGAGAG GGCGAGAGAGAAGGCTAAGAGGATGTTGGAGATGATGAAAGCCTTTGGAGAAGAAGAGGGGATTCTGGAATCGGGCGGGTTGGCTCGGACTTGGAACCGA GTTGGCGGTGGGGCAACTACATTTTAATTTCTCTTTTTTTGAAGTTTATATTTGTGGGAAAAAGGATAATTAGTACTGGTGAAGTGTCTTAGTGAAAGGG TGAGGGGTTGAAGTGGTGATTCATCTGAATTGGGAGTAGCTAATTTATGTTGTTATTGGGATTGTGGATTTAGCTTGTAGATCATGGAGGTAATCATTAT GCTTTATACATTTATTCATTTATTTATTTAAGCTTATCGGAGTGGTTTAGCATACATGTAGGAAACAACTTACATTATGTTTTTAGACATATTTTATCAT CTGTGAAACTATCAATTTTTATAATGTATTTATGTTTGAGGACCTCACATGAAAATTAAATTTAACTTAGTTTAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72113; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_57840
| Blastp | U-box domain-containing protein 38 from Arabidopsis with 57.12% of identity |
|---|---|
| Blastx | U-box domain-containing protein 38 from Arabidopsis with 58.59% of identity |
| Eggnog | ubiquitin-protein ligase activity(ENOG4111IM2) |
| Kegg | Link to kegg annotations (AT5G65200) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019431702.1) |
| Pfam | U-box domain (PF04564.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |