Id Trinity | FTRINITY_DN57852_c0_g3_i7 |
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Name Transcript | Ll_transcript_56681 |
Sequence | TTCCTGGAAATCTGGTCCCTTGTTTCAATTGATCCCTTCAAGTGTAACTTCCGTGCTAATTATTTGGATTCATTAGCATAACTATGACAGGTTTTCATCC AATTCCTGGAAATCTGGTCCCTTGTAAGCAATTTGATCCTCAGAAAGTTCGGGATTCTTAACAGATAAGCTGTCAATAACAATCTCATCGGCGTAAGCAA CACAATTAAATTCTAGAAAGGGTCCACCCTTCTTAGAAACACTGACTGAAAGTGGAAGACTTGATTGAGGTGCACCCTGACTCTCTTGATCATCATCGCG ATCATCATCACGATCATCATCACGTCCTTCTCCCGTGACTAGATCAGGCATCTGAACCTCCACCTTAATTTCTTCATCTTGGTATGTTCTTTCAAGTATT ATAGACTGTTGTCCGGGATTGTCAAGTATCTTAAACAGAAAATTACTTGGAACCGCGTCACCAGTGTGATCATCATCCTGTTCAGCACATTGAATTTCAT ATTCGATGACCCGAATAAGGTTCTCATCAGACGTGGGTTTGGTCTTAACAACAGTAGATAAAAATTGAAACTTTGGAACCAATGTGTTCAATTTCGGGTG TTGATTGATGGCGCTGAACAAAACGGTATGATAACTCTGATGGGTCTTCGTCAATTGGCCCGTAATAGCAAGAGCCCTCGCAAAAGAACCAGAGCTAGCC CAAGACACATTAGACTGAACCCAGGAAAATAAAATGGTGCTTTGTCTGACAGGAACAAAGCTGTCAATGGACTGGAAACTAATGGAGAAATTATGTTCGC TAAGGAACTAATTCCTTAAAGACATCCTTGAACCATTCCCTGCTCAGTAGCTCCAACTTGTTTTGATTCAATGCTGCAAATACTTGGACGCACAAAAACT CCAAAAATAGAACAACCTACTAGAGCATAAGGAACCCATCCTGCCCATGATATGCTGCAGACAAACATACTATTGTAGCTAACTAAGAGCTCGGTCGAGA TCAACTTGACCTCTCCTACAGCTGGTATTAATATGGGCATAAAAAATAGATGTTTAAGGGTTGCTCCAATCCCACTAATCATCATTAAATCAGCAAACTG ATTCATACTGTATTGGAAACGTGCCTTTAAATAATACTGCATGTGGTGGAAAGTTGAGTTATTACAGACCAAAAAGTTATAAAGTTCTTGGTGCCATTAG ACTCTGATGGATTATAGCCATTATGTAATTATGTTTACTTTTTGCTGTGAACTATGCTCTTCTTATTGCTCAATTCTAAAAAATCTCTTCATTCCAATTT CAAATGTATAGATTTTTGTTACACTAAAAATGGTACAGAGTATCTTTTAATCAATAATTTTTTTGCAAGTGCATAGTATTATCCTAAAATAAATCCATTC TAGACACTATTTATTAACAAAGGTATGTCCAAACAAAAAGTGATGGTTTTCTGGATCAATGTATATGTATTTTCTTGATGAGACAAAATTTGGTGTTCAA AGATCCTTATTGGTCTTATTTTGTTGAAGCTATAATAGTTGGACAAATTGCAATTAATGTGGTCTGTGACACCACTATCTAAAATCCAATGCATAGTTTT AGAATTACCTTAATCTTGTTCAATGATCTGTACTGAGCTAGCAGATAGGACATTTGAAAGACCTTCTTTATTAGAAGATTTATCAGTTTTCTGTGTCTGT TGTAGTATATTGATGAGACCTTGATATTCCTTATTGCTAAATCCAAAGATCTTGCCTTCTTGATGTTCTTGTTATGAATTGTTCTTATCCTCCTGATCAC TTTTTGTGGATGCTTGAACAAAGTTTGCTTGTTCTCCTCTATTGAATGGAAAGTTTGCAGGGAATTCATGTAGCTTGTAACAATTGTCAATTGTATGACC AATTCTTTTGGAATGAGTGCATAATTTTCTAGAACCTCTTTCATGTTGGTTCAATTCCAAGCATGGTTTAGTGCATTAACTAGTATGTGCCTTAGTTAAG CTGATATAGCTGGAGGGTGTGGTGCAGTTGGTGTGTGCCTCGGCCAGGTCAAGTGTCTTGGCCAGATCATGCGCCTCGGTCAACTTGTGGTGTGCCATGG CTAGGTCATGCGCTTCGGTGAGATTATGATGCACCATGGCCAGGTCATGTGCCTCGATCAGATTGTGGTGTGCCATGGCCAGGTCATGTGCCTGGGTCAG ATTCTGTTGTGCCATGGCCAGGTCATGCGCCTCGGTCAGATTGTGGTGTGTCATGGCCAGGTCATGCGCCTCGGTCATGTTGGTGCTGTCATTCTTTGTT AGATCCACATGTGCCTCGGTCACGCTGGTGCCATTTGTCTCGGTCAGGTTCACATGCGCCTCGGTCACGCTGGTGCCATTTGTCTCGGTCATGCGCATAG ACGCCTCAGTCACGCCAGTGCCATCTATCTCGGTCACGTGCATAGGCACCTCGGTCAAGTTGGTGTCATCTGTCTCGGTCATGCTCGTGCAGTGTTCCTT AGTCAGATTGGGTCAGGTATGTTTGAGCAGATTGGTGTGACTGATGCATAGGTTAATGATGGTAGGTTTATTCATGCTTTTTGCTTCAATCTTTGTTGAA AATAACATTTTTTATTACTTGAAGAAAGTTGATTGGTTGGGGATATAGGAACACAATGATTCCGCTTAGCCTGTGCCACATTATCAGTCCTTGAGGAATC TAATTGTGCTAAATGGGATGCATTTATCAGTGCAGAGAAGATTCTGAGTGCTGAGTTTGGGAAAAACCAGTCAAACTCTTGCTGTTCAAATTGGTGATCT CATTAACGAAAGTGCTTTGTTTGGATCGCATGTAAATAAAGGAAAAACGGATATGTCATAGGGGTTACTTTCATTGCAAGATGTTTTGTTGTTGATGATT GTTGGACACATATTAGCGAACAAGGATCCTCTCCAATAGAGAGACGAGTAATTGATTTTGTATGTGTTTTCAATGACAAAAGTGTAATCATATTGTTGTC TAATGATGTTATTGTTTCCTTGTTTTTTTAGTACTTGCTAATAGAAAGGATCGTTACTCCATATTAGAAGTTGAGAATTTTCTAATATCTGGTTCTGATG GTCCATTTTCTTGGCAAAAGGAGCGCTTGTTAAAAGAAGTTGTTGCAGATGCCCTTCTTGAAAACCCATCAGTAGAAAAACTCATATTTCTAGATGGAAT TAGGGAGGAACTTGAAGCTAATGGCAACAAATTGAAATCGAAGGAAACTACTGAAGAACCTTTAGAACAAATAGAGATGGATGATTTTGATGATGATCAA TGGGGCAAATGGGGTAAAGAGGAGGGTGATGATGATGATAAAAATGAGCAAGTTTATGATGACGTGCAACTGAAGTTAGAGATGCGTGATAGGGTGGATA ACTATTTCAAATTTCTTCATAAATTATCGACTCTGAAAATAAAGAATGTGTCATTGAGGGATGGATCATTAGCCATGGATGGTAATTTTGGTGAGGATAC CTATATGAGAAAAGAACTACTTTATAAGCTGCTAACAAAGGTGTTGCATAAGTATGATCTACCAAGGTTAGAACATCATTCTTCAACTGTTATTTTTTAA GAGTGGGTTTGGAAGATTTGACCTTGGTTGGGGGATTTTGGTTTCATAACTTATTTAGGAATCGTGATTTTGGCAGTCTCATAAATTGTATCACTCCATA TGCTATTTAACTATCCATTCTTTAACATTCTAATTGTTATTTTTTTTCCTCACTTTTTCCTTCCTATGAATATAAATGCTGCAAGCAAAACCAAGTCTTG CTGATCAAATGTGATTTTGGTGTATGTTACTGGGGGCATCAATGGGGTTGTGTTCAGATTCTTGAATGGCTTTATTTTCAGCT BLAST |
Tissue | flowers |
Gene name | LI_gene_72159; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56681
Blastp | Sec1 family domain-containing protein MIP3 from Arabidopsis with 54.21% of identity |
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Blastx | Sec1 family domain-containing protein MIP3 from Arabidopsis with 55% of identity |
Eggnog | NA(ENOG4111C06) |
Kegg | Link to kegg annotations (AT2G42700) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019457042.1) |
Pfam | - |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |