| Id Trinity | FTRINITY_DN57862_c1_g3_i6 |
|---|---|
| Name Transcript | Ll_transcript_57173 |
| Sequence | CCATCAAAGGAAGAACTGAGTGAGAATCTGAAGAATGGCTCAAAGGAGAAGACCCTCCTTAAGGACCCTGCCAAGCCACCTGCTAAGGCTCAAGTAGTTG GTTGGCCACCAGTGAGATCATACAGGAAGAATGTGATGACACAAAAGGTTAGCAATGAGGATTGCACTGAGAAGATAGGTTGTGGGGCTTTTGTTAAGGT TTCCATGGATGGTGCACCTTACCTACGCAAGGTGGATTTGACAATGTACAAATGCTATCAAGAATTAGCTGATGCCTTAGCCAAAATGTTCAGCTCCTTC ACCATGGGTAAGTACTAAAATAATTAACTTCATATATTTTCATTCTATATTGCCCTCAATTAAAACCTCCTTTAATTACCACAACTTTGACCTAATAACG TTAACTATATTAGGGTATTTTCATGAACAATGGTGTATATAATAAACTAAATTTTACTATATAAGTTTTTCCTTATGTTGATTTTTAACTAATATCATAG CACCAAAGATAAAACAATAACCAAGATCTAATTTTAATATGTAGGATGAATTGCATGAATCAAAAGATTATAATATTGAAGATAATCAAATATAAAATAC GAGTATTAGTGATTATTATATATATGTAAATTTAAATCCTTGATGCATGACGATGCTATATATGTATGAGCTGGATTAATCTTCTTGGGATTGTTACATT CTAGATACTGTATAATTTGTGGGTTACTGCTTGTGATTAACTATTATAATGAGTAGAATATTAAATTAGTTTTTATTTGATTTATGTTTTGTAATACAAA TACTATAGGTGACTATGGGACCCAAGGAATGATAGACTTCATGAATGAAAGTAAGTTGATGGATCTTCTGAACAGCTCTGAATATGTGCCAACCTATGAA GATAAGGATGGTGACTGGATGCTCGTGGGTGATGTCCCATGGGAGATGTTTGTTGGTTCATGCAAGCGTCTGCGAATAATGAACGGATCGGAAGCAATTG GGCTTGCGCCAAGAGCCATGGAAAAATG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72244; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_57173
| Blastp | Auxin-responsive protein IAA14 from Arabidopsis with 69.31% of identity |
|---|---|
| Blastx | Auxin-responsive protein IAA7 from Arabidopsis with 89.33% of identity |
| Eggnog | Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations. Repression is thought to result from the interaction with auxin response factors (ARFs), proteins that bind to the auxin-responsive promoter element (AuxRE). Formation of heterodimers with ARF proteins may alter their ability to modulate early auxin response genes expression(ENOG410YEC3) |
| Kegg | Link to kegg annotations (AT4G14550) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019451124.1) |
| Pfam | AUX/IAA family (PF02309.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |