Ll_transcript_58798

• Id Trinity: FTRINITY_DN57865_c1_g1_i18
• Name Transcript: Ll_transcript_58798
• Sequence: ATATAAATCTCTTTCACTATCAGTGCATACATTTTTTTCTCTTAGAGTAATACATGCATATTTCCTGATATATTTTTTTGGAATAAAGAATAGCTATGTT TCAATTTTGCAACGAAAAAAATAAATGAAATCAAGGAGGAAAAACCGAAGAGTCTTAGCTCATATGGCATACTGGCATAAAGTCTCTTCGAGTACTACTT CATGCAGGTTCATCCCCATTGAAGCTGCTTTGTGTTAACTTTGGCTTGATTTCTCCCCTTCTGTACCAGGTTGTGGGCCTAAAATATAAAAAGAGTGGTA TAATTGTAACCCCTTTCTCCTTTGCACCATCTAGCTACTCTAATAGAGACAAATGCTGACAGACATATGTTCTGATTATCTGAGATAATTTTTTCCTTGC TTATTTTAGATCTAAATGACCTTTTAGAAAATTTGATTTTTGATGGGACGTAGTGATGTTGTTTAACCCATCTAATGGAACATCCCTTTAATTGTTGTTA ATGTAGTTAAATGTGTCTTATATCTAAAAGCAAAGAGTGAAATCCCTATGTTTGGAAATTCTTTTTACTTACTGTGAAAACATTATTTTCCTCTGATTGA GAGGGAAAAGACTTGAAGGGTGTATTTAATTTTTCCTCTGGCACCAAAGAATTAGATGGAATCAGGCGGGCAAGGGTTTCCTCACGTCTAATATCTTTCT AGGTTTTACAAGTTTTCTCTATGAACAATGCACAAGACCTGTTTATACTTGAAAAGCTCTGCCCTTTCATTTTGTTGGATCACTAACAAATGCTTAACGA ATTTGATTGAGAGATTTATAAACTGGTCCTGAGAATTGTTTTCATTTTGTCATGTCTAACAGTTGTATAATTGGGAATCCAACTCTCAAATGAAACCAGA GCAGACAGAAGAATGTGCTACATATAAAACTTGCACTTGCAGGCATTGTGGAAAGAAGGCAGATGGGAAGGATTGTTTGGTTTGTGATTCATGTGAGGAG ATGTACCATGTGCCCTGTATTGAGCCGGCTGTGAAAGAAATACCCCAAAAAAGCTGGTTCTGTGCCAATTGTTCTTGTAAAGAAATTGGATCTCCACATG AGAAATGTGTGGTGTGTGAAAAGTTGAACGTCCCAGAGACCCTGAAGAACGTTGTTGGTAAGGAAAACATCCCTACAGATGAGGAAACACAGAAAGAGGT GGAAGAGAATTTAAATGGTACTCATGATGATGGAATTCAAGTGTCCATAGGTGGGAGAGACTCACCTGACTGCAAAATTTGCCAAGAAGTGGTCGATGGT GAAAAATTAATAATATGTGGTCACCCTTTTTGCCCCAGTAAATACTACCATGTAAGGTGTTTGTCAAGTAGGCAGATGAAGATGTATGCTCAATGTTGGT ACTGCCCTTCTTGTTTATGCCGAGTTTGCTTCACTGATCAAGATGATGATAAGATTGTTCTCTGTGATAGCTGCGATCATGCATACCACATATATTGCAT GAAACCTCCACGAACTTCTGTTCCAAAAGGGAAATGGTTCTGCAGAAAATGCGATGCAGGGATCCAAGCAATACGCCGAGCAAAAAGGGCATATGAGAGT AAAAAGTGTAAAATGGATGAAAATGTTTCGAAGCGAAATGGTAAGATATGGTGCAGTAAACGAGGACGGGACGTAGTCGGAGGAATGGACATGCTTTTAA CTGCAGCCAATACTTTGAATTTTGAAGAGAACTTAACTGAAACCCAGACTGAGTCAAAGAGAACTTGAGCTTTTTTTAGCATACTTTTTAAGTTTTAACT GCTAATACCTAATGGCATATTGCATGTGTTTTCTTTGTTCTGATTACTAATTTTGTTAGGTTGTAAAACTATGGTAGATTTTGTTGGGTGACTTGGATAC ATGACATTGAAAGACCAAAGATAGGACTATAGAAAGACAGAGTAAAAAGCATCAACAGAGACTGATAAAGTGTACTTTGTGACAATAAGCAGGTCAGATA CTATTGTAATAGATGTGATTGATACTTGATGTGAAATTGTAATGTCTGATTTTTGTGTGACAATAAGCAGGTCAGATA
• Tissue: flowers
• Gene name: LI_gene_72263;
• Additional information: details;

Expression of Ll_transcript_58798

FPKM

• FPAB: 0.1
• FPNAB: 0.5
• LF1: 0.4
• LF2: 0.6
• LF3: 0.9
• LF4: 0.4
• UF1: 0.4
• UF2: 0.3
• UF3: 0.4
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_58798

• Blastp: PHD finger protein EHD3 from Oryza sativa with 38.2% of identity
• Blastx: PHD finger protein EHD3 from Oryza sativa with 38.2% of identity
• Eggnog: PHD-finger(ENOG410Y8ZD)
• Kegg: Link to kegg annotations (4344443)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019430418.1)
• Pfam: PHD-finger (PF00628.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;