Ll_transcript_58778

• Id Trinity: FTRINITY_DN57865_c1_g1_i4
• Name Transcript: Ll_transcript_58778
• Sequence: TTGAGATAAGAAGCACTAGCAACAGAAATCTAGTACATTCATAATGAGTTGAATTTTGAAGATGTATGTCCAACTGAATTCTAAGAAGAAAAAGGGAAAG TAGCATCTGTTTCAAAAGTTCAAACCAATAAAGAATATCGAATAAGACGTGTAAGTATAAGGTGAAGTGCAGAAAGCATCTCAGATTTCTTCACATTTCC ATTATTATTACTTCAACTTCAATCCTCTCTCTCTCTCTCTCTCTACAACACTCCCTTTCCATGCTTCTATCTAATTCCCAATTTACCCCCTCTTACTATT TCTGCCACTTTCTTAGTGTTAATTAATAATTGCTTGCTTCACTCCACTTTTCTCTTTATCTGAATCTGAATCCTCACACCCTATTGTTTCAAGTTGCAAT TTTTCTCTCTTGGTTATTGTGGGTAACTTAGAACATTACTTTAACTTGTAGTGGCCTTTTGGGTTTTTCATATTTTCACTTTGGGAAGATTTGGGGGCAT TAAAATCTGGATAAATTTTGGATTTTGGAAGGTTAGCTCTAAAGAGAAACCCTAATTTTGGTTTGCTGCAAAGCTTAAAAATCAAAATTTTATTACTATT TTTATGGGCATTGAGGGTGACACTAGCAATTCTGGTTACATAGAATGTGCTGAACAAGTTCAGTGTTTGCAAAGTGAAACTAATAGTAATGGGGTGGAAG TTTCAAATGGGAATGGTTTTGCTGAAGAGGCTCAGCACTTCAAAAGTGGAGCCTTTAATAATAGGGTAGCAGTTTCAGATGTAAATGATGTAACTGAAGA GGCTTTATGCTTTAAAAGTGAAGCCATTACTAATGGGGTAGCGGTTTCAGATGGGAATGATGTTATGGAAGAGGCCTTGTGTTTGAAAAATGAAGCCTTT AATGATGGGATGACAATTGCAAATGGTAATGATGTTACTGAAGATGGGTTGTGTTTGAAAAGTGAAGCCATTAATATTGGAGTAGCGGTTTCAGATGGGA AGGGTGTTATGGAAGAGGCTTTGTGTTTGAAAAGGGAAGCCTGTAATAATGGGGTGGCAATTGCTGATGGGAATGTTGTTATTGAAGAGGGCCTGTGCTT GCAAAGTGAACCCATTAGTAATGCGATGGCGGTTGCAGATGGTTTTGATTCTGCTGATAGGGACTCCGGTGGACTTGAACATTTACGTATTTATAAGAGG CGCAAGCGTGGAAAGTCTAGTTCAGATAACAAAGATGATAGCAGAGAATGTGTGGAAGCTGCAAGTCATCTAGAAGACCAGGAAATTCTTAAAATTGACA AAGATGGACAAGAACACTCTTCACAATTGGAGTGGTTGTCTCATAGAACACAAGGTGAATCTAATGGGCATGCAAATGTCATGCATAATGGATGTTCTAG TAAAACACATGGCCATGGTGTGACTCATACATGTCAGTGTGTGCTCCGTGATATTTTAAAATCTGAAAAATTCAGCTCATTATGGAAGGCTCTACTTGAA AATTTCCAAGGAATGAAGCCTGATAGTGTATTTGACTTCAATATCATGACCTCAAGGATGGAGGAGAAAGTTTATGAGCAATCACCTGCACTTTTCTTGT CAGATATGCAACAGGTTTGGCAAAAGCTCCAAGATACCGGTAACGAGATCGTTGCTCTAGCCAAGAGCCTGTCCAACATGTCAAGAACATCGTACCGTGA GCTGTTCAACAACCAGGAATCTGATTCTCATATGAAACCAGCACAGACAGAAGAACATGCTACCTACAAGATTTGCAGTTGCAGGCGTTGTGGAGACAAG ACAGATGGCACCGACTGTTTGGTTTGTGATTCATGCGAGGAAATGTACCACGTCTCGTGTATTGAGCCTCCTGTGAACGAAATACCCCACAAAAGCTGGT ACTGTGTCAATTGTACTGCTAGAGGCATTGGATCTCCGCATGAGAATTGCATAGTATGTGAAAAGTTGAATGATGCGAAGACTGAGAACAACATAGTTGG TGATGAAAGCTTCGCTATGAATCGGGAAACACTAAATGGATTGGAAGAGAATTCAAATTGCACTGATGATGATGGCATTGAAGTATCCATAGGTGGGAAA AACACAGCCGATTGCAAAATTTGCGGAAATGATGTGGATGGTGAAAAAATAAAAACATGCGGTCATCCGGTTTGCCCCAATAAATACTACCATGTAAGGT GTTTGACAAGTAAGCAGTTAAAGTCATATAGCCACTGTTGGTACTGCCCTTCTTGTTTATGCCGAGTTTGCTTCACTGATCAAGATGATGATAAGATTGT TCTCTGTGATAGCTGCGATCATGCATACCACATATATTGCATGAAACCTCCACGAACTTCTATTCCAAAAGGGAAATGGTTCTGTAAAAAATGTGATGCA GGAATCCAAGCAATACGGCGGGCAAAGAAGGCATACGAAAGTAACAAGCGGAGAAGAACTGGGGATGATGTTTCAAAGCCAAGTGCTAATCCTGAAAAGA AATGCAGTGACAAACATGCACACAAATTGGAAAAAGGTGGAGGAATGGACATGCTTTTAACTGCAGCCAATACACTGAACCTTGAAGAGAACTTGACTCA CAATCCGGTCTAAGTCGCAAAGAACATGAATTTTCTCGAGGGATTTGTGAATGCCTAGTTATTGTTCGTAACGGCTTTAACTTCATACCGGTTAAGTGTT AATAGCGGATTATTTCCCGTTTGCTGCATTTTTTTGGATGACTGGTATTTTTGTAGGCTTTAAAAGTATGGTAAATTTTGCTGATTTTTGGATGCATGAC ATGGAAAGACAGGATTATGGAGGCTAAAAAGCTGGAAGCATTGTTAGACCCCATAAGTGATTATATGCAAGAGTATGATAGATGTAGTTGATATGGAGTT TAATTGGCTGCTTTGCCTGTTTCAATGTTGGAGAAAAGTTGAATGATAAGATCATACTTAGAGAGCAATTTCAAACTAAGTAGGGTGTTGCCTAAAGTTT TATTACAACATCCATACATATAAATGACAGAATCGTGACACACAATTATCTCTGTCATCACGACAAATACCATTGTAAATATATTGAATTTTTCTAGATG ACAAATATGAACTTCAGAACTATCCTATCGACCAATGTTGTGAGGACGGACTAGACTAGGCTGATGGAAGAGGATCCTCTGTCCCTAAATGATGTTGTCT CCATGTCCCTGACCAATAGAATTTCAGAGAATAATATAAAAGTAATAATTTTTTATTTTATAACTTAT
• Tissue: flowers
• Gene name: LI_gene_72263;
• Additional information: details;

Expression of Ll_transcript_58778

FPKM

• FPAB: 0.8
• FPNAB: 1.8
• LF1: 0.7
• LF2: 0.7
• LF3: 0.4
• LF4: 0.8
• UF1: 0.8
• UF2: 0.4
• UF3: 0.8
• UF4: 0.3

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_58778

• Blastp: PHD finger protein EHD3 from Oryza sativa with 34.63% of identity
• Blastx: PHD finger protein EHD3 from Oryza sativa with 33.49% of identity
• Eggnog: PHD-finger(ENOG410Y8ZD)
• Kegg: Link to kegg annotations (4344443)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019464433.1)
• Pfam: PHD-finger (PF00628.28)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;