| Id Trinity | FTRINITY_DN57871_c0_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_56286 |
| Sequence | TTTAGATATTTTTAATCAAAGCCAGGAAAAAAAACATAAAGTGAAAATAAGTAACTCTTCATTCAACTTAGAAAATCTCCATTTGAAAAAAACCATACAC CAGAGGAGTATCGTGGATTGGGAAGCATAAGTTTTGTTCAGAATTTGCAAAGTCAAAATTTCGGTAACTATGGCAACTTCATGGGCTGATTCTGCTGACC ATTCAGCCAATGTCTCTGCACGGCCCGCTTATCTCCCTCCGCATCTTCGCAACCGGACATTGTCTTCAGAACCCCCAGCTGCTGCAACATCCTACTTGTC TTCATTGGGGGGTAGTGATCGTGCGAATTATGGCGGTCTGGCTGCTGGTTTTCATGGGGGTATTTCCTCTAAACCTGATCTCAGGCTCCAGGGATACGGT TCTAATGTTCAGAATGGCGGCGGTGGTGGCGGCTGGAATGGTAGAGGGGCAGGGATGGACCGTGGAAGGCGTGAGGTTAACCCTTTTCAGAATGATGAAC CTGTGGATCAATTTTCTCATGAGCAAGAAAACACGGGGATTAACTTTGATGCTTATGATGATATCCCTGTGGAGACTAGTGGGGGTAATGTGCCTCCACC TGTAAATACATTTGCGGAAATAGACTTGGGTGAGGCGTTGAATCAAAACATACAAAGGTGCAAGTATGTCAAACCAACTCCGGTTCAGAGGTATGCCATA CCGATTTCTCTCGCGGGGAGAGATTTGATGGCATGTGCTCAGACAGGGTCTGGAAAGACAGCTGCCTTTTGCTTTCCTATTATAAGTGGAATCATGAGGG AGCAATGTGTTCAAAGACCACGTGTAGCACGAACTGCTTTCCCTATGGCTCTTATCCTCTCCCCTACTCGGGAGCTTTCATGCCAGATACATGATGAGGC CAAAAAGTTTTCTTATCAAACTGGTGTAAAGGTGGTAGTTGCTTATGGAGGAGCACCAATCAACCAACAGTTGCGGGAGCTGGAAAGAGGAGTTGATATT CTGGTAGCAACACCGGGACGATTGGTGGATTTGCTTGAGAGGGCTAGGGTGTCACTGCAAATGATAAGATATTTGGCTCTTGATGAGGCAGATCGGATGT TGGATATGGGTTTTGAGCCTCAAATAAGAAAGATAGTTGAACAGATGGACATGCCTCCTCCTGGCATGAGACAGACTTTGCTGTTCAGTGCCACATTTCC CAAAGAGATACAGGGACTTGCATCAGATTTTCTTTCAAATTACGTGTTTCTGGCTGTTGGAAGGGTTGGTTCAAGTACTGATCTAATTTCTCAAAGAGTA GAATATGTGCTTGAGTCAGACAAGAGAAGCCACCTCATGGACCTTCTCCATGCTCAGAGGGAAAATGAAACTAATGGCAAGCAATGCCTGACATTAGTTT TTGTGGAAACAAAGAAAGGAGCTGATGCATTGGAGCACTGCTTGTGTGTTAATGGATTTCCTGCAACTAGCATTCATGGTGACAGAACACAGCAAGAAAG AGAACTAGCATTGAGGTCATTCAAGAGTGGAAACACACCAATTTTAGTGGCCACAGATGTTGCAGCACGTGGCCTTGATATTCCACGGGTAGCACACGTG GTAAATTTTGATCTTCCCAACGACATTGATGATTATGTGCATCGGATAGGAAGAACAGGGAGAGCTGGGAAAATGGGATTAGCAACAGCCTTCTTCAATG ACAGTAATTTGTCCATGGCCAAACCATTGGCTGATCTGATGCAAGAGGCAAATCAAGAAGTACCTGTTTGGCTCACACGCTATGCAGCAAGGGCTTCTTA CGGTGGTGGCAACAGAAACAGGCGGTCAGGGGGAGGAGCCCGTTATGGTGGCCGCGATTTTAGGAAGGAGGGCTCATTTAATAAAGGAGCAGATTACAAT GGTGGAACAGGTGGGTACGGGGTTCCTGCCAATTATAGCGGAGGGTATGGTCAAGGTGTGACTAGTGCTTGGGATTAGATTATTGTCCCATGGCTAATAT TCATCCTCATGTTTGTGTATATAAATTTCAGATTTTAATGATGAAATGTTTTTTCTTCTCGACCATGATTTGCTTGAATTCATGCATTCCATACTCCAGG AAAGCTTGTCATATCTAAGGGTCACATTTTGGACTTAAACTATGGGCAACTTGTGGGAGGATCTGGGTTGTCTCATTTGTTTAGAATTGAAGCAAGAATC AGGTAACCATGTTGTCCAAATATGTAATCGTGTTGAATTTGAGGCCTTAGAACCATTTTTTAGACTCAGGGAGAAAGCCTAAGAGAAAATTGAATCTGTT CCATATTAGTGTTATATCCATTTGTTGGCTGCAACTTTCTCTTATGCGTTCTTTGGGGACCTTAGACTTGGTTCTTGGAAGGGCTTGTTATGATGCAATT TTTTCCCAAGGGCCACAATCTTAACATCTTGATTGTCCTATTTCTGAATATTGTAACACCTTCATTTTGGAAAATAGAATTGTAGAAATATTTAAATTTT TAGAGTAATTGTTCCAAAACATGATCGTAGAAATGTATGACAATTCTTTGAAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72313; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56286
| Blastp | DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 73.64% of identity |
|---|---|
| Blastx | DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 73.97% of identity |
| Eggnog | purine NTP-dependent helicase activity(ENOG410XNTI) |
| Kegg | Link to kegg annotations (AT2G42520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428608.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |