| Id Trinity | FTRINITY_DN57871_c0_g1_i4 |
|---|---|
| Name Transcript | Ll_transcript_56287 |
| Sequence | TTTAGATATTTTTAATCAAAGCCAGGAAAAAAAACATAAAGTGAAAATAAGTAACTCTTCATTCAACTTAGAAAATCTCCATTTGAAAAAAACGTACGGA TTTCTTCGCAAGAGTGTTCCTCAATCTTTTCAAAATTTTCTCTCATTTCCATTCATTTAGGTTTTGCTTCTTTTGCTTTGTTTCTTCGTTAATCTGATTC GATTGTTGTTTCCATACATCGCATTTTTTTTCTTTCTTTGATCTATTTGTTTTCAGAATCATACACCAGAGGAGTATCGTGGATTGGGAAGCATAAGTTT TGTTCAGAATTTGCAAAGTCAAAATTTCGGTAACTATGGCAACTTCATGGGCTGATTCTGCTGACCATTCAGCCAATGTCTCTGCACGGCCCGCTTATCT CCCTCCGCATCTTCGCAACCGGACATTGTCTTCAGAACCCCCAGCTGCTGCAACATCCTACTTGTCTTCATTGGGGGGTAGTGATCGTGCGAATTATGGC GGTCTGGCTGCTGGTTTTCATGGGGGTATTTCCTCTAAACCTGATCTCAGGCTCCAGGGATACGGTTCTAATGTTCAGAATGGCGGCGGTGGTGGCGGCT GGAATGGTAGAGGGGCAGGGATGGACCGTGGAAGGCGTGAGGTTAACCCTTTTCAGAATGATGAACCTGTGGATCAATTTTCTCATGAGCAAGAAAACAC GGGGATTAACTTTGATGCTTATGATGATATCCCTGTGGAGACTAGTGGGGGTAATGTGCCTCCACCTGTAAATACATTTGCGGAAATAGACTTGGGTGAG GCGTTGAATCAAAACATACAAAGGTGCAAGTATGTCAAACCAACTCCGGTTCAGAGGTATGCCATACCGATTTCTCTCGCGGGGAGAGATTTGATGGCAT GTGCTCAGACAGGGTCTGGAAAGACAGCTGCCTTTTGCTTTCCTATTATAAGTGGAATCATGAGGGAGCAATGTGTTCAAAGACCACGTGTAGCACGAAC TGCTTTCCCTATGGCTCTTATCCTCTCCCCTACTCGGGAGCTTTCATGCCAGATACATGATGAGGCCAAAAAGTTTTCTTATCAAACTGGTGTAAAGGTG GTAGTTGCTTATGGAGGAGCACCAATCAACCAACAGTTGCGGGAGCTGGAAAGAGGAGTTGATATTCTGGTAGCAACACCGGGACGATTGGTGGATTTGC TTGAGAGGGCTAGGGTGTCACTGCAAATGATAAGATATTTGGCTCTTGATGAGGCAGATCGGATGTTGGATATGGGTTTTGAGCCTCAAATAAGAAAGAT AGTTGAACAGATGGACATGCCTCCTCCTGGCATGAGACAGACTTTGCTGTTCAGTGCCACATTTCCCAAAGAGATACAGGGACTTGCATCAGATTTTCTT TCAAATTACGTGTTTCTGGCTGTTGGAAGGGTTGGTTCAAGTACTGATCTAATTTCTCAAAGAGTAGAATATGTGCTTGAGTCAGACAAGAGAAGCCACC TCATGGACCTTCTCCATGCTCAGAGGGAAAATGAAACTAATGGCAAGCAATGCCTGACATTAGTTTTTGTGGAAACAAAGAAAGGAGCTGATGCATTGGA GCACTGCTTGTGTGTTAATGGATTTCCTGCAACTAGCATTCATGGTGACAGAACACAGCAAGAAAGAGAACTAGCATTGAGGTCATTCAAGAGTGGAAAC ACACCAATTTTAGTGGCCACAGATGTTGCAGCACGTGGCCTTGATATTCCACGGGTAGCACACGTGGTAAATTTTGATCTTCCCAACGACATTGATGATT ATGTGCATCGGATAGGAAGAACAGGGAGAGCTGGGAAAATGGGATTAGCAACAGCCTTCTTCAATGACAGTAATTTGTCCATGGCCAAACCATTGGCTGA TCTGATGCAAGAGGCAAATCAAGAAGTACCTGTTTGGCTCACACGCTATGCAGCAAGGGCTTCTTACGGTGGTGGCAACAGAAACAGGCGGTCAGGGGGA GGAGCCCGTTATGGTGGCCGCGATTTTAGGAAGGAGGGCTCATTTAATAAAGGAGCAGATTACAATGGTGGAACAGGTGGGTACGGGGTTCCTGCCAATT ATAGCGGAGGGTATGGTCAAGGTGTGACTAGTGCTTGGGATTAGATTATTGTCCCATGGCTAATATTCATCCTCATGTTTGTGTATATAAATTTCAGATT TTAATGATGAAATGTTTTTTCTTCTCGACCATGATTTGCTTGAATTCATGCATTCCATACTCCAGGAAAGCTTGTCATATCTAAGGGTCACATTTTGGAC TTAAACTATGGGCAACTTGTGGGAGGATCTGGGTTGTCTCATTTGTTTAGAATTGAAGCAAGAATCAGGTAACCATGTTGTCCAAATATGTAATCGTGTT GAATTTGAGGCCTTAGAACCATTTTTTAGACTCAGGGAGAAAGCCTAAGAGAAAATTGAATCTGTTCCATATTAGTGTTATATCCATTTGTTGGCTGCAA CTTTCTCTTATGCGTTCTTTGGGGACCTTAGACTTGGTTCTTGGAAGGGCTTGTTATGATGCAATTTTTTCCCAAGGGCCACAATCTTAACATCTTGATT GTCCTATTTCTGAATATTGTAACACCTTCATTTTGGAAAATAGAATTGTAGAAATATTTAAATTTTTAGAGTAATTGTTCCAAAACATGATCGTAGAAAT GTATGACAATTCTTTGAAAG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72313; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56287
| Blastp | DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 73.64% of identity |
|---|---|
| Blastx | DEAD-box ATP-dependent RNA helicase 37 from Arabidopsis with 73.97% of identity |
| Eggnog | purine NTP-dependent helicase activity(ENOG410XNTI) |
| Kegg | Link to kegg annotations (AT2G42520) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019428608.1) |
| Pfam | DEAD/DEAH box helicase (PF00270.28) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |