| Id Trinity | FTRINITY_DN57875_c0_g1_i11 |
|---|---|
| Name Transcript | Ll_transcript_56946 |
| Sequence | CTTAATGAGTCATGATAGCATGGAGAGATGTGTTCCCTATGAATGAGCTCCACTTATAAGTAGACTAGATACACAATCATTCATTCATTCCTTCAAAATT AAAGGAGAGTGAGTGAGGAAGAAGACAAAAAAAAAACAATCACAATGGCCTCTTCAATTTGTAACAAGCTTTTTATGACGTCATCTTCTTCCTTCGAGTG CCATTCAGATCCCGATTTCTCTGCTTCTCCAAGATTCGAGAACCTTCGTCGCCGTAAAAACGTTTCTCCCACTACGACGTCGTTTTACCCTCTCTCCTCT CTCATCTTCCGTTTCCCTCCTAACTTCCACCGCCAGCTCAGCACCAAGGCCCGCCGCAACTGCAGCAACATCGGCGTCGCGCAAATCGTCGCCGCTTCGT GGTCTAACAGCGACGCCAACGTTGCCGCTTCTCCGGTGACGTCTCCGGCAGCTGCTTCTGCCGTTGACGCCGCCATCCCGCCCCTCTCCGTCGCCCCGGC TGAGATCGACAACGATGTTGTGGTTGTCGTCTCCGACGAGGGTGGAAATGGAAACGGGGTTGTACAGGCTAACGGTTCCGTCGATCAACTTTCGTATTCT TCGTTTTTGAAGTCTGATGGAAGCTTAACCATTCATGCTGGTGAGAGATTAGGACGGGGCATTGTAACTGATGCAATTACCACTCCTGTGGTCAATACTT CAGCCTATTTCTTTAAGAAAACTGCTGATCTCATTGATTTCAAGGAGCAACGCCAATTTAGTTATGAATATGGGCGCTATGGAAACCCAACTACTCAGGT TCTGGAGGATAAGATAAGTGACCTGGAGGGGGCTGAGTCAACTCTGATTCTGGCATCTGGGATGTGTGCTAGCACAGTCCTGTTGATGGCGCTGGTTCCG GCTGGTGGACATATTGTAACCACCACTGATTGCTATAGGAAGACTAGGATATTCATCGAAACCATTCTTCCTAAGATGGGAATCACTGCCACCATAATTG ATCCTGCTGATGTTGATGCCTTGGAAGCTGCACTGAAACAGAACAATGTTTCTCTGTTCTTCACTGAGTCTCCTACGAATCCATTCCTCCGATGTGTTGA CATCAAGGTGGTTTCAGATCTCTGTCACAAATATGGGGCTAAGGTCTGCATTGATAGTACATTTGCCACACCTATGAACCAGAAGGCCCTTGCCCTTGGA GCTGATCTTGTGGTGCACTCTGCAACAAAGTACATTGCTGGACATAATGATGTCATTGCTGGTACCGTGAGTGGTTCACTTACGTTGGTTTCAGAAGTGC GTAAATTGCATCATGTTTTGGGTGGTACTCTTAACCCGAATGCTGCGTACCTAATCATTAGAGGCATGAAGACACTTGCACTCCGTGTACAGCAGCAGAA TTCAACAGGATTGAGGATGGCCAAAGTTTTAGAGGCACATCCTAAGGTGAAGCACGTCTATTATCCAGCCTTGCAAAATCACCCCGAGCACGAGCTTGCC AAGAGGCAGATGACTGGTTTTGGTGGTGTTGTCAGTTTTGAGATTGATGGAGACCTGGCAACTACTGCAAAGTTTATTGATTCTCTGAAAATCCCATATA TTGCTCCATCTTTTGGTGGCTGTGAAAGCATTGTGGATCAACCTGCTATCATGTCTTACTGGTAATTGCTTGAACTCCTTGTCATATATTGCTCCATCTT TTGGTGGCTGTGAAAGCATTGTGGATCAACCTGCTATCATGTCTTACTGGTAATTGCTTGAACTCCTTGTCATATGCATGATTTAGCACTACTTACGTCT CATCATGGGATATGGTCCTCTACTTGAATGTGACACTTTGGTGCAAGTATCTTTAATGGGTCCTATTTGATTTGTGGTGTAGATTATACTTGAGCACTGT TCTTTTTACAACTAAAAGTTAACAAATTTCTCTATCTCTCACTTTTGTTCTTTTATCCCTATCAAAAAAACCAATGGGACAATAAAAATCATGGCCACAT GGGAGGCCCAATGCACGAGTCTTTCACTTAGTCCCTGCAACCAAAATGTCTGTTTACAAGGTTTGAACTCGTGACCTCATTCATCATGGTCACTAAACAA CAATCTCACCGTTGTGTCAAGTTCACCCTTCTAAAAGGGTGGCCCGGTGCATCAGGCTCCCACTTAGTGAGGTCTGGCTTACCATAGCAAGTAGAAAGGT TGTTTCCCGATTTGGTAAGTTGGTTGTGATAAAACATGACTGGTGATATGTATTGTGGAACAGGGATCTTCCACAGTCAGAAAGGGCTAAGTATGGGATT CATGACAACTTGGTTCGTTTCAGCTTTGGAATTGAAGACTTTGAAGATTTAAAAGCTGATATCCTGCAGGCCCTGGAAGCCATATAGGCCTTACTACTAG TAAGAAAATGCAACTACTGAATTCAAAATTTGAGGAGTTGTGATCATAAACTAATGTTAGGTTGTGATTGTATATGTGCTAATTCGAATGTACATGTTTG TGTGAAAAAGAAAGCAAAAAACAAATATGAGCTCTTGTTTTGCTCTTGATAAGGTGTTTTCAGCTCATGTATGTCAAGTTGAGGGTAAGGTGAACATGTT CTGTCCCAATAGTATGTACCACTTTATGTGTCATTGGTTCTCATTGGTCAAAAAATTATTTCATTATTAAATTTTTATTTTAAATATATTCTTTCAACCA ATCACAATTACTGGAACACAGAGTGACACAGCAGATGTGGTCCATGGTAAGGGTCATAGTACTACTCTGAGGATTGCCTAATTCATACAACTTAGCTAGT GTAAAGGACTAAGGCTTTCCTCACTGTTGTACAAACTGATAACTATCCAATGCAACTAACTAAAATGATTCCTATCAAAGTTTTGGCCTGCTACTGCTAG TACTCGAATTGATGATAATTATTTTTAAGAAGTAATTTTGTCCAAACAGTTAATAGTGTCCCAATTAAGATAAGTATTGAGTCTAACTCTTTTTTGGTCC ATATGGAAAGAAGTGGTTGAGTTCTATGAAGCACGGATACGTGCAACACCCTTGCATACCGGTGTCTGACACGTATTAGTGTACGATACTCCCGGATTCG CGCAAAATACGTGTCTATAGAGTATCCAAAAATTAAAAAATTAAAATAAAATAAATAAATATTAGGATAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72341; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56946
| Blastp | Cystathionine gamma-synthase 1, chloroplastic from Arabidopsis with 81.94% of identity |
|---|---|
| Blastx | Cystathionine gamma-synthase 1, chloroplastic from Arabidopsis with 83.47% of identity |
| Eggnog | cystathionine(COG0626) |
| Kegg | Link to kegg annotations (AT3G01120) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019427881.1) |
| Pfam | Cys/Met metabolism PLP-dependent enzyme (PF01053.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |