| Id Trinity | FTRINITY_DN57880_c0_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_57541 |
| Sequence | ACTGTACCAAGAATTGCAATCTCAGCTTAAAGAGAGTCAGCGTGCTTTAGGCGAGGCAATATCTGATGCTGAGTTGAATCACAGGTATAAAGCTGTGTGT AATTCTATCTAAAGTGTTAATCTATGATAGGAATAACTCTAGGAATAGGCCTCCTATTAAAAAGGTGCATGTGAGGTGACGAGTTAGAAAGGATTTGAAG GAATAACTAATGGTTTAGATGAATAGATAATTAAATAAAATGGATAATTCCCTAGTTATCAAGATTAGTAATGGATAGTTCCCTAGTTATCAGGATCAGT AGGAATAACCGATAGATTAGAATAAATAAACGATTCCCTTGTTAGGGAGGAATTTCTATCAGCATAAATAAGAGGGGAAGCTCCTCAATTTGGGTGGATT TCAGGTAGTTAGACATTGGCTGGGGAGGTTTATTGGGAATCTGGTTGTAATTATTGGAATTGCTATATTCATTTTAATTAATAATATTCGTCTTCTAGTC TTGATCACATTGATCCTGAATAGAGAATTCACTTTCTTGTCATTGGGTTATTTCTTATTATCTGTCGCTACCAGTTCTATTAATCTATCTGCAATTATAT GTCTTTGTCTGCATTTGCTGACTTAACTAGTCAAATATTAAATTATCTCTAGTGCACATGAAAAAATGAAGTCTATGGGCCAAGTTCTGTCAAAATCAAA AGACCAATTGTATGATTGCAAGTTGGTCACTGTGAAGTTGAGGGCAATGCTACAAACTGCTGATGAGCAAGTTAGGAGCTTGAAGAAACAAAGCACATTC CTAAGTCAGTTGGCTGCAAAGACCATACCAAATGGAATTCACTGCTTATCAATGCGCCTTACCATAGATTACTACCTCCTTGCTCCGGAAAAGAGAAAGT TCCCAATGAGTCAGAATTTGGAGAATCCTGGCCTTTATCATTATGCCCTGTTCTCGGACAATGTATTGGCTGCATCTGTTGTTGTCAACTCAACTGTTCT GAATGCAAAGGATCCTTCAAAGCATGTTTTTCACCTTGTTACTGATAAACTAAATTTCGGAGCCATGAACATGTGGTTTTTGTTGAATCCTCCTGGAAAA GCTACAATCCATGTTGAAAATGTTGATGAATTTAAGTGGTTGAACTCTTCGTACTGCCCTGTCCTGAAGCAGCTTGAATCTGCCGCAATGAAAGAGTATT ATTTCAAGGCAGGACATTCAACCACAGGCGCTTCTAATCTGAAGTACAGAAACCCAAAATATCTCTCAATGCTCAACCACCTCAGATTCTATCTTCCTCA AGTTTATCCAAAATTGGATAAGATTCTTTTTCTCGATGATGACATTGTTGTCCAGAAGGATTTGACTGGATTATGGGCTGTGAATCTGCATGGAAAAGTA AATGGTGCCGTTGAAACATGTGGCGAGAGCTTTCACCGATTTGACAAGTACCTTAACTTTTCAAATCCGCATATTGCAAAAAATTTCGATCCAAATGCTT GTGGTTGGGCATATGGGATGAACATGTTTGATTTGAAGGAGTGGAAAAAGAAGGATATTACTGGCATATATCACAAGTGGCAGAGTATGAATGAAGACAG GGTGCTGTGGAAACTGGGAACATTACCTCCTGGGCTAATGACATTCTATGGATTAACACATCCTCTAAATAAATCATGGCATGTACTTGGTTTGGGTTAC AATCCAACCGTAGACCGTTCCGAGATCGATAATGCTGCCGTCATACACTACAATGGTAATATGAAGCCATGGTTAGAGATAGCCATGACAAAGTATAGGC CTTACTGGACCAAATATGTCAAGTATAATCATCCCTATGTTCAGAACTGTAAGCTAATTGAGTGATCCTGAGAATTAGATCTTAAGAACAAAGAACACTT TTTTTTTTTTTTTTTAATAAAATTAGATGAAGTTAACTAATATTCATAACAAGTGTATTAGTTACTTTTGTTCTTCTTATACTTGAGTTTGAAGGATTAA TATTTAAAAATGTTAGAATAAATATGAGAAATGGTAAGGGTATAACTACAATAACGTAGGGAGAATAAGAGGGAGTGAAGGATTACGAATAGGATAAGGT TTAAACCAGTGATAGAAATAGAATCTACTTCTACCAACACACCGCGTTCTATGTTGAGTGGGCATGGCGACACTATCCTCCCCTGCGCATGTTAGCAACA AGCCTTTCCCACATTCATCTGAACCGAAGCGATTGAGTGTGAGGTGCGCAGTGTCACCCGCAACATGGCAAGAGAGTCGCCGTATAGTGTCCATCTCCAT AGCTCTTTCTCACTTGCTTCTCATTCCTAACCGTGCTGCTGCTGCTGAAGGAAGTATATTAGATAAGTATGTCAAGAGAAAAAAACTTGATCCTCTGGAG GCTTATGTACCTGCTGTCATACTTACTCAGTTCCAGATCAAGGACTTGGAAAAAACATTAGAAGGCGATGAACCCCAATTTTCCCTCTGCCGATCTCTAC TTCGTTCTGGGCCTGCGGCATCACTTCGTATGAATATTCGAGCAGTAGCACAATATGCATCTGACAGTGGCAATGGTAAAACGGCATTCAACAATGTTGA TGATTGTCTGAGGTCTCTTGAGGAACTCGATAACTTGCTTCTGCGTGCATCAAGAAAGGATACTGGAGCCTCCATCAAATCAATGAAGGCAAAAATAGGT TCTACCCTTAATGCTCTGGACAGCCTCTTACAAACTGTACCGCCGGATGTACTAAGTAAGGGAAAGGTTATAGCTGATTCATACAGAGAACCAGAAGATG TGGAAACACAGAGTCCGGACCCGGAACTAAAGCAATTAGAATCAATACTGTGAATAGCTAACATAGGTTTTCACCTTTTGGGTATTGGCCAACATCGCTG GGAATGTGGAACCTAAGACCCAAGAGGTAGAATATGAAAACATAGATGACTTCATCTATATTCATATTAAAAATAGATTTCTGTTCAATTTTATAACTTC ATCTATTTACATTAACTTGTGTGGTTGGTTACTCGTGATACCAGTGAAGACCTCTAAGACTCACAGATGACTCCTTATATTCACAAAACAGTGTGTCAAT CAGTTAGGACTCCATCCCTGGTGTTTAATGATGCATTTAAAAAATTAAAAACCTTGCACTTCAAGCTAACTATGCTGCAAACAGAGAATGAATGAAACGG CTTGTGTGGAGCAATTTTAAAGTGTAACTTGCACTTTAGAGGTCAAGGCGCTCAAATTTGGACAAAATTCTAATATAGATTAATAAATTGATGTATAACA ATTTCAAACTTTTCTCATATTTAAGGCTTGTCTTATGGGGCTTTACAAAAGTTAGAACCAGTAAATACTCTTTATCTAACCGATATCAAACAAGTCTAAG TCTAATGACCGATGATTAGATAAAAAATATTGCAATGCAACTACAGTGGTCGTAGATCTGAATGTGGATGACGTTTTAATAGATAAGCTTGGTTGCAGAC GTTTTAGCTACAGTGGTGAGCGTGGACCGTGGGGCTTTGAACTATGTTGGTCGCGTATATCTTAATGGAGACGACATTTTAGATACAAGACAACAATCAA TTGTGGTAACACTGAGGTGCATGTGAGAATGTAGCAGTGGATATTGTAGTCGTCGTGTTGCCTGAGGAGTCAAGGTCTATGTTCTTAACGAGAAAGTGTG GAAGTAGGTGACAAGGCTAATTTGGATGGCAGTTCTAGGTTACAACTCAACAGTTTCCTCAGTCAAATCTTCGAAACCGGGCATATAACCAGAGTTTGGG GTTGTAATGATATAAAGTTTTTTTCCATTGATTAATTAAATTGTTGAATTAGTCCTTCCAATTAGTGTCACCAATGTGATTCTCCAAAAAAATGTCACCG AATAAATCACGGAAAAATTAAAATGGCACCACATAATAAAATTAAATCCCTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72392; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_57541
| Blastp | Polygalacturonate 4-alpha-galacturonosyltransferase from Arabidopsis with 86.97% of identity |
|---|---|
| Blastx | Polygalacturonate 4-alpha-galacturonosyltransferase from Arabidopsis with 87.13% of identity |
| Eggnog | Alpha-1,4-galacturonosyltransferase(ENOG4111FC1) |
| Kegg | Link to kegg annotations (AT3G61130) |
| CantataDB | Link to cantataDB annotations (CNT0001702) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019461204.1) |
| Pfam | Glycosyl transferase family 8 (PF01501.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |