Ll_transcript_57550

• Id Trinity: FTRINITY_DN57880_c0_g2_i5
• Name Transcript: Ll_transcript_57550
• Sequence: ACCTGAGTATTGCAAAGATGAAGAACAAGCTTCAACTGTACCAAGAATTGCAATCTCAGCTTAAAGAGAGTCAGCGTGCTTTAGGCGAGGCAATATCTGA TGCTGAGTTGAATCACAGTGCACATGAAAAAATGAAGTCTATGGGCCAAGTTCTGTCAAAATCAAAAGACCAATTGTATGATTGCAAGTTGGTCACTGTG AAGTTGAGGGCAATGCTACAAACTGCTGATGAGCAAGTTAGGAGCTTGAAGAAACAAAGCACATTCCTAAGTCAGTTGGCTGCAAAGACCATACCAAATG GAATTCACTGCTTATCAATGCGCCTTACCATAGATTACTACCTCCTTGCTCCGGAAAAGAGAAAGTTCCCAATGAGTCAGAATTTGGAGAATCCTGGCCT TTATCATTATGCCCTGTTCTCGGACAATGTATTGGCTGCATCTGTTGTTGTCAACTCAACTGTTCTGAATGCAAAGGATCCTTCAAAGCATGTTTTTCAC CTTGTTACTGATAAACTAAATTTCGGAGCCATGAACATGTGGTTTTTGTTGAATCCTCCTGGAAAAGCTACAATCCATGTTGAAAATGTTGATGAATTTA AGTGGTTGAACTCTTCGTACTGCCCTGTCCTGAAGCAGCTTGAATCTGCCGCAATGAAAGAGTATTATTTCAAGGCAGGACATTCAACCACAGGCGCTTC TAATCTGAAGTACAGAAACCCAAAATATCTCTCAATGCTCAACCACCTCAGATTCTATCTTCCTCAAGTTTATCCAAAATTGGATAAGATTCTTTTTCTC GATGATGACATTGTTGTCCAGAAGGATTTGACTGGATTATGGGCTGTGAATCTGCATGGAAAAGTAAATGGTGCCGTTGAAACATGTGGCGAGAGCTTTC ACCGATTTGACAAGTACCTTAACTTTTCAAATCCGCATATTGCAAAAAATTTCGATCCAAATGCTTGTGGTTGGGCATATGGGATGAACATGTTTGATTT GAAGGAGTGGAAAAAGAAGGATATTACTGGCATATATCACAAGTGGCAGAGTATGAATGAAGACAGGGTGCTGTGGAAACTGGGAACATTACCTCCTGGG CTAATGACATTCTATGGATTAACACATCCTCTAAATAAATCATGGCATGTACTTGGTTTGGGTTACAATCCAACCGTAGACCGTTCCGAGATCGATAATG CTGCCGTCATACACTACAATGGTAATATGAAGCCATGGTTAGAGATAGCCATGACAAAGTATAGGCCTTACTGGACCAAATATGTCAAGTATAATCATCC CTATGTTCAGAACTGTAAGCTAATTGAGTGATCCTGAGAATTAGATCTTAAGAACAAAGAACACTTTTTTTTTTTTTTTTTAATAAAATTAGATGAAGTT AACTAATATTCATAACAAGTGTATTAGTTACTTTTGTTCTTCTTATACTTGAGTTTGAAGGATTAATATTTAAAAATGTTAGAATAAATATGAGAAATGG TAAGGGTATAACTACAATAACGTAGGGAGAATAAGAGGGAGTGAAGGATTACGAATAGGATAAGGTTTAAACCAGTGATAGAAATAGAATCTACTTCTAC CAACACACCGCGTTCTATGTTGAGTGGGCATGGCGACACTATCCTCCCCTGCGCATGTTAGCAACAAGCCTTTCCCACATTCATCTGAACCGAAGCGATT GAGTGTGAGGTGCGCAGTGTCACCCGCAACATGGCAAGAGAGTCGCCGTATAGTGTCCATCTCCATAGCTCTTTCTCACTTGCTTCTCATTCCTAACCGT GCTGCTGCTGCTGAAGGAAGTATATTAGATAAGTATGTCAAGAGAAAAAAACTTGATCCTCTGGAGGCTTATGTACCTGCTGTCATACTTACTCAGTTCC AGATCAAGGACTTGGAAAAAACATTAGAAGGCGATGAACCCCAATTTTCCCTCTGCCGATCTCTACTTCGTTCTGGGCCTGCGGCATCACTTCGTATGAA TATTCGAGCAGTAGCACAATATGCATCTGACAGTGGCAATGGTAAAACGGCATTCAACAATGTTGATGATTGTCTGAGGTCTCTTGAGGAACTCGATAAC TTGCTTCTGCGTGCATCAAGAAAGGATACTGGAGCCTCCATCAAATCAATGAAGGCAAAAATAGGTTCTACCCTTAATGCTCTGGACAGCCTCTTACAAA CTGTACCGCCGGATGTACTAAGTAAGGGAAAGGTTATAGCTGATTCATACAGAGAACCAGAAGATGTGGAAACACAGAGTCCGGACCCGGAACTAAAGCA ATTAGAATCAATACTGTGAATAGCTAACATAGGTTTTCACCTTTTGGGTATTGGCCAACATCGCTGGGAATGTGGAACCTAAGACCCAAGAGGTAGAATA TGAAAACATAGATGACTTCATCTATATTCATATTAAAAATAGATTTCTGTTCAATTTTATAACTTCATCTATTTACATTAACTTGTGTGGTTGGTTACTC GTGATACCAGTGAAGACCTCTAAGACTCACAGATGACTCCTTATATTCACAAAACAGTGTGTCAATCAGTTAGGACTCCATCCCTGGTGTTTAATGATGC ATTTAAAAAATTAAAAACCTTGCACTTCAAGCTAACTATGCTGCAAACAGAGAATGAATGAAACGGCTTGTGTGGAGCAATTTTAAAGTGTAACTTGCAC TTTAGAGGTCAAGGCGCTCAAATTTGGACAAAATTCTAATATAGATTAATAAATTGATGTATAACAATTTCAAACTTTTCTCATATTTAAGGCTTGTCTT ATGGGGCTTTACAAAAGTTAGAACCAGTAAATACTCTTTATCTAACCGATATCAAACAAGTCTAAGTCTAATGACCGATGATTAGATAAAAAATATTGCA ATGCAACTACAGTGGTCGTAGATCTGAATGTGGATGACGTTTTAATAGATAAGCTTGGTTGCAGACGTTTTAGCTACAGTGGTGAGCGTGGACCGTGGGG CTTTGAACTATGTTGGTCGCGTATATCTTAATGGAGACGACATTTTAGATACAAGACAACAATCAATTGTGGTAACACTGAGGTGCATGTGAGAATGTAG CAGTGGATATTGTAGTCGTCGTGTTGCCTGAGGAGTCAAGGTCTATGTTCTTAACGAGAAAGTGTGGAAGTAGGTGACAAGGCTAATTTGGATGGCAGTT CTAGGTTACAACTCAACAGTTTCCTCAGTCAAATCTTCGAAACCGGGCATATAACCAGAGTTTGGGGTTGTAATGATATAAAGTTTTTTTCCATTGATTA ATTAAATTGTTGAATTAGTCCTTCCAATTAGTGTCACCAATGTGATTCTCCAAAAAAATGTCACCGAATAAATCACGGAAAAATTAAAATGGCACCACAT AATAAAATTAAATCCCTC
• Tissue: flowers
• Gene name: LI_gene_72392;
• Additional information: details;

Expression of Ll_transcript_57550

FPKM

• FPAB: 1.5
• FPNAB: 3.5
• LF1: 7.1
• LF2: 8.7
• LF3: 3.6
• LF4: 2.7
• UF1: 5.7
• UF2: 8.9
• UF3: 3.1
• UF4: 3.2

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_57550

• Blastp: Polygalacturonate 4-alpha-galacturonosyltransferase from Arabidopsis with 85.45% of identity
• Blastx: Polygalacturonate 4-alpha-galacturonosyltransferase from Arabidopsis with 85.45% of identity
• Eggnog: Alpha-1,4-galacturonosyltransferase(ENOG4111FC1)
• Kegg: Link to kegg annotations (AT3G61130)
• CantataDB: Link to cantataDB annotations (CNT0001702)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019461204.1)
• Pfam: Glycosyl transferase family 8 (PF01501.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;