| Id Trinity | FTRINITY_DN57884_c0_g1_i16 |
|---|---|
| Name Transcript | Ll_transcript_56833 |
| Sequence | CATAATAACCTCTTCTTTTTTTTTGTTCTATCACCTTACATTCATCCTTCATTGTTAATTTATCCATATCTCATTCCTTCTCTCTTTCCTTCATCTCTTC ATATCTTCTTTCTCTTCCTTCTTAAGATCCGATGCTCTTAGATCCAATTTTTCACAAAACCCCACTTCGTATCTGATCCAACCACCAACTGGGTTCTCTC TATTTTTTAAGATAAGAAGAGATGGAATCAGATCTTGGCAAGCTCTTCATTGGAGGGATTTCATGGGATACCAATGAGGAACGTCTCAAAGAATATTTTG GGAAATATGGAGAGGTGATAGAGGCTGTGATCATGAGAGATCGTGCAACGGGTCGCGCTCGTGGTTTCGGTTTTGTTGTCTTTTCTGATCCTGCTGTTGC AGCAATAGTCATTATGGATAAGCACATAATTGATGGTCGCACAGTTGAAGCAAAAAAGGCTGTTCCTAGGGATGACCAGAATGCTATGAATAGACAGCCT GGTGCTGTCATTGGATCTCCTGGCCCCGGACGCACGAAAAAGATTTTTGTCGGAGGTTTACCATCAACAATCACAGAAAGTGAATTTAAGCAATATTTCG ATCAGTTTGGTACAATTACTGATGTTGTGGTAATGTATGATCACAATACTCAGAGGCCAAGAGGTTTTGGCTTCATCACTTATGATTCAGAAGATGCTGT GAATAGAGTTCTTTATAAAACATTTCATGAACTGAATGGGAAGATGGTCGAGGTCAAGATGGCAGTTCCTAAAGAGCTATCCCCTGGACCAAGCCGAAGC CCATTGATAGGATATAACTTTGGTTTGAATAGGGCGAGTAGCTACCTAAATAGTTATGCTCAGGGTTTTAATATGAACCCACTAGGAGGCTATGGAGTCA AGATGGATGGCAGATTTAGTCCACTTTCTACTGGTAGAAGTGGTTTTAACCAAATTGGTTCTGGTGGTTATGGAATGGGAATGAATTTCGGTTCAGGATT GAGCCCAATTTATGGAGGGACATCCAACTATGGGAGTGGTCTAGGATATGGTAGGATATTTAGTCCTTTCTACAATGGAAACAACTCAAGCAGATACACC ACTCCTATTGGCTATAGCGGTGACAACACGAGAAGCGATTCTCTCTTGAACTCAACTTCTCACAATGTATGGGGAAATGGAAGCCTTAGCAATACTACCA ATAGCCAAGTCAACCCTGGTGCTTACTTGGGATCTGGAAGTGGGAACTTTGGTGTTTCGATTGGAAATAGTGGCACAAATTGGAGTCCATCAGTTCCATC CCAGGGTGGAGGTGCTGCTGCTTCAGGCTTTACTAATTGGAGTAATGTTTATGAAGGTGGAGGAGATGGTAACATAGGATTAGGAGGGGTAGTGTATGGA AGGAACAGAAACCCGAATGTGACTCAATCCACTTCCTTTGCTGCACCAGCTAGTGGTTATGAAGGATCCTATGGGAACTTGTACCACAGTGGTTCGGTTT ACAGTGACTCGACTTGGCGATCTGCTGCTTCTGAGATAGATGGTTCTAGCTCGTTTGGTTATGGACTTGGTGGTATAGCATCAGATGATCCAGTAAAGAC TTCGGAGGGTTTTATTGGAAACTACAATGTAACAAGTAGGCAACCTAATAGAGGTAAGATCTTTTTCTAAGTTAACAAATTAATTTTTTTGTTGGTTTTT CTTTCCAATTGTGTTTCTAACTTTTTATATTTCATAGTATGAACGTCAGGCTATGAACTATTATAGTAAGTTGAGAAAGAAATCTGTTTATTTTATACTA TGAATGTTTGTAACTGTGATATAGATAAAGATACCGTGGAAGCATTTGTGAGTCTTCTTTTAATTATACCAAATACTATAGGCTCCTGACTTTTATTATG CACTTGTTTTCTCCTTTTCTTTTCTTTTCTTTTCCTTTCTCTCCTGCAATCTAAAAGAATATTAGCTTCCTGCACTTATATCCATGTTTCTTGTTTAATT TCTTTCCCAGATATTGTTACTGGATGTTTCATTGGACATTTAATTTGATGTTTCATTTGATGTTAAGTTAACTTGAAAGACACTAAATATGTAGATGCAG ATTACTCTCCCTCGAGCTAAACGTGTATAAATATTGTCTCTTGAACAGCACTTCGAGAGTTCCAAACTTGTTTTGTTTTATATGCCTTTTCTGTATGAAA TTCTTCAATTTATGTGAAGTTCAAACCTGTTCGGCCGTGCTACTCATTTCTTTTCTCATCTTATCCTTTCATGCATCATAATATTGTGAAATGGTTGACA TTTGAACATGTCAAGTACATATTTTTAGAAGTTATGAATTAACTTGGTTGTGTTGTTACTCATTTTCTTTTGTTGGTGTCTCCACATGCTTCAGGAATTG CTGCCTAGGTGATATGTTAATTGGATATGTCTTGGTAACAGTAGATCAAGAGAAAATGGTTAAAAAAAAGAGGTATTGTGAATTCAAACATCATCGTCAC CGGAGAGATATCAGTTCATAAGGGAATTTCGTCAAATATAGCTTACGGTGTTATTTCATTTGAAGAATACATAAGAGAAATCAGTGAAGGAGTTTTGTGT AAGATTTGAGATTTTTGTTTTGTCACCTTTTCGAATTTTCAAGACTTGGGTTCCTTTCTTGGAATTTGATTGAGGTGTAACATCAGATTGGGGATATACT GTGGAAGATGTAGTGCATCCCCAGAAAGGTGCACCATCATTAGTATGTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72424; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56833
| Blastp | RNA-binding protein Musashi homolog 1 from Homo with 48.91% of identity |
|---|---|
| Blastx | Heterogeneous nuclear ribonucleoprotein 1 from Arabidopsis with 56.48% of identity |
| Eggnog | Rna-binding protein(ENOG410YA8Z) |
| Kegg | Link to kegg annotations (4440) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456440.1) |
| Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (PF00076.21) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |