| Id Trinity | FTRINITY_DN57884_c0_g1_i20 |
|---|---|
| Name Transcript | Ll_transcript_56837 |
| Sequence | ATATATATATATATATATATATATATATATATATAGATAGATAGATAAATTAAAAAGTAAGAAAAGAAAAATAATAAAAGAGGATGAGACCACACTTTCA TCCTCCTTCATTCTCGATTTTTACATAATAACCTCTTCTTTTTTTTGGTTCTATCACCTTACATTCATCCTTCATTGTTAATTTATCCATATCTCATTCC TTCTCTCTTTCCTTCATCTCTTCATATCTTCTTTCTCTTCCTTCTTAAGATCCGATGCTCTTAGATCCAATTTTTCACAAAACCCCACTTCGTATCTGAT CCAACCACCAACTGGGTTCTCTCTATTTTTTAAGATAAGGTCACCCTTCTTCATAGATTTATCTTTTCTGCATTAAAGATTTCTTTTTTAATCACAATTC AGCTTAATTATCGATCATCCAATGAACTATGCATTTATGTTGGTCCTGTGCTTGAATTTCGATCATCACTCAATGATTTTGATTATTTGTATTGAAAATT TGATTTTTATTTGTTATTGTAACTGGTTTGGCATTAGAATTTTGATTCAAAATGAGTGCTTATTTGAACTTGCATAATCTCAACATTGAAATGAGTGATT GATGGCTAACTTGGAATATTTGGTTGGTGACAGAAGAGATGGAATCAGATCTTGGCAAGCTCTTCATTGGAGGGATTTCATGGGATACCAATGAGGAACG TCTCAAAGAATATTTTGGGAAATATGGAGAGGTGATAGAGGCTGTGATCATGAGAGATCGTGCAACGGGTCGCGCTCGTGGTTTCGGTTTTGTTGTCTTT TCTGATCCTGCTGTTGCAGCAATAGTCATTATGGATAAGCACATAATTGATGGTCGCACAGTGAGTTGTTTAATTATTATCATATATCTCCATGTCTTTG CAGTAATGGTTACTATCTAAACTTGTGTTTCTTTTCGAGATCACTGTTTCCCTAGTTTTATATTCCATATTCTTACTTTGTTGGTGATTGAAATCATGTT TGCTTTTTACTCTTCATTGAGCTTAGCAATTTTGGTGCTTGAATTTTTGTAATATGCATTGTGTCAAGCTTGTCCTTTTCTTATTGTTGCTTATAAGACA GGAAATAGAAAATGGCTTGCAGACTTTGAGCTGTGTTGTCGTTTTAATTTTCAGGTTGAAGCAAAAAAGGCTGTTCCTAGGGATGACCAGAATGCTATGA ATAGACAGCCTGGTGCTGTCATTGGATCTCCTGGCCCCGGACGCACGAAAAAGATTTTTGTCGGAGGTTTACCATCAACAATCACAGAAAGTGAATTTAA GCAATATTTCGATCAGTTTGGTACAATTACTGATGTTGTGGTAATGTATGATCACAATACTCAGAGGCCAAGAGGTTTTGGCTTCATCACTTATGATTCA GAAGATGCTGTGAATAGAGTTCTTTATAAAACATTTCATGAACTGAATGGGAAGATGGTCGAGGTCAAGATGGCAGTTCCTAAAGAGCTATCCCCTGGAC CAAGCCGAAGCCCATTGATAGGATATAACTTTGGTTTGAATAGGGCGAGTAGCTACCTAAATAGTTATGCTCAGGGTTTTAATATGAACCCACTAGGAGG CTATGGAGTCAAGATGGATGGCAGATTTAGTCCACTTTCTACTGGTAGAAGTGGTTTTAACCAAATTGGTTCTGGTGGTTATGGAATGGGAATGAATTTC GGTTCAGGATTGAGCCCAATTTATGGAGGGACATCCAACTATGGGAGTGGTCTAGGATATGGTAGGATATTTAGTCCTTTCTACAATGGAAACAACTCAA GCAGATACACCACTCCTATTGGCTATAGCGGTGACAACACGAGAAGCGATTCTCTCTTGAACTCAACTTCTCACAATGTATGGGGAAATGGAAGCCTTAG CAATACTACCAATAGCCAAGTCAACCCTGGTGCTTACTTGGGATCTGGAAGTGGGAACTTTGGTGTTTCGATTGGAAATAGTGGCACAAATTGGAGTCCA TCAGTTCCATCCCAGGGTGGAGGTGCTGCTGCTTCAGGCTTTACTAATTGGAGTAATGTTTATGAAGGTGGAGGAGATGGTAACATAGGATTAGGAGGGG TAGTGTATGGAAGGAACAGAAACCCGAATGTGACTCAATCCACTTCCTTTGCTGCACCAGCTAGTGGTTATGAAGGATCCTATGGGAACTTGTACCACAG TGGTTCGGTTTACAGTGACTCGACTTGGCGATCTGCTGCTTCTGAGATAGATGGTTCTAGCTCGTTTGGTTACGGACTTGGTGGTATAGCTTCAGAGGAT CCAGTAAAGACTTCTGAGGGTTTTATTGGAAACTACAATGTAACAAGTAGACAACCTAATAGAGGAATTGCTGCCTAGGTGATATGTTAATTCGATGTTA TGGTAACAGTAGATCAAGAGAAAGTGGTTTAAAAAAAGAGGTATTATGAATTCATACATCTCCATCACTTGAGATATATCAGCTCATAAGGGAATTTCAT CATATAAAGCTAATGGTGTTCTTTCATTTGAATTATACATAAGAGAAATCAGTTACAAGGGGTTTTGTGTAAGGTTTCAAATTTTAGTTTCATCATCTTT TCGATTTTTCGAGACTTAGGTTCCTTTCTTGGAATATGATTGAGGTGTAAAATCAGATTGGAGATATACTCAGGAAGATATAATGCCTCCCCTTAGAGGT GCACCATCATTAGTATGTTTTTTCGTATAGTGTAATAAATTTCGAATATTTTTCGTTTCTCGTCGGCAAAGCTGTTTGTTCTTGACACCATTTTTTTTAA ATGGGACATGTTGATCAAATTGTAAGTGAGGTTCAGTTTGAAACATGAGATGATAGGGGCATCCATCTAGGATCCCCCATCAAATAACTAAGTTGCTACA CAGTTTTATTATTATTGTTATTATTTTGTGTTACAAGTTTACACTTGCTCAATTTTTTATGTCAAGTTTCATCACATGTTTGGTTTTGGCTAATGATGTT ATTGAATGTGTATGGAGCATATTGATTGGTTCAAAACAGAAACATGTTTGTAGTTTATGCTTGTCAACATCAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72424; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_56837
| Blastp | RNA-binding protein 1 from Arabidopsis with 68.29% of identity |
|---|---|
| Blastx | Heterogeneous nuclear ribonucleoprotein 1 from Arabidopsis with 42.05% of identity |
| Eggnog | Rna-binding protein(COG0724) |
| Kegg | Link to kegg annotations (AT1G58470) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019456443.1) |
| Pfam | RNA recognition motif (PF16367.4) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |