| Id Trinity | FTRINITY_DN57891_c1_g1_i7 |
|---|---|
| Name Transcript | Ll_transcript_57442 |
| Sequence | GAGAAAAGAAAAGTGAAACCTTTTCTCTCTCTCTTGAAAAATCTGACAGGATCGTACTCATACACACTCTTAAAATAATTGCAGTTTGTGTTCTCATTGA TTGGAAGCTGTAAGAGAGAGAGAAAGAGAAAGGGGTAAAAGCAACAGTAGTAGTAGACTAGTAGAAGAAGAACATAGCATAGCGTGGCCACTAAGTAGTT AAGTATCAACCATAACACCATAAACTACAACAACAACTAGAACAAAGTACATACAATACCATAGCTACTGCAAAAATTTCATCTTTTTCCAACCCCATTT CTTATCTTTTCTGGGTTTTTCTGCATTCTTTGAGATCCCTTCTCTTCTGGCTGTTCATTCATTGCTCCTTCAGATCTGTTTGCTTTTCAAGTTTATTCCT TTATTTAGCTTACTGAAAAGCAGAAGCTGCATATCTTTTGTTACTTGGTGTTGTTGGGTTCTGAAAGAATAGATATTGTAGCATGAAGTGTTCAGTTCAA AATTGGAACTTGGGGTGTTGGGGGTTAAGTGGAGTAAAAGCTAATGAGGCATAAAGCTATTGTCTTTTGTAGTGATACTGGTTTTGGTTGAGAATTGAAG GGTGGGTATTGTTTAGATTTGAAGGTTTTTTTTTGGTGAATGGGATTAGGGGACATATAACAAGGATTATATTCTTCTGTTGAAAAGGATCGTGGTTGTC ATTTTCCCAAAATTTTGTTGCTTACTTAGTCTACTGAAGAAGATTGCTTTGGAATCATTGATTGTGGTTTCAATTTTGAGACTTTTCTTTTTTTGTTCAA ATGAGACTTTCTTCAGCTGGTTTTAGTCCTCCACCCCTGGAAGGGGAAAAGAGATGTCTAGATTCAGAACTTTGGCATGCATGTGCTGGTCCTCTTGTTT CATTGCCGGCAGTTGGAAGCCGTGTGTTTTACTTTCCACAAGGTCATAGTGAACAAGTGGCAGTGTCAACCAACAAGGAAGTGGATGCCCATATCCCCAA CTATCCAAGCTTACCACCTCAGCTTATTTGTCAGCTCCATAATCTGACTATGCATGCGGATGCTGAGACTGATGAAGTCTATGCACAGATGACCTTGCAA CCTTTGAATCCTCAAGAGCAAAAGGAAGCGTACCTTCCAGCAGAGTTGGGCACTCAGAGTAAACAGCCAACAAACTACTTCTGCAAAACTTTGACGGCCA GTGACACAAGCACTCATGGAGGATTCTCTGTTCCTCGTCGGGCTGCTGAAAAAGTCTTTCCTCCATTGGACTTCTCTCAACAGCCTCCCTGCCAAGAGTT AATTGCAAGGGATTTGCATGGTATTGAATGGAAATTCAGACATATCTTCCGGGGCCAGCCCAAAAGACATCTTCTTACAACTGGATGGAGTGTCTTTGTG AGTGCGAAAAGACTTGTTGCTGGTGATGCTGTGCTGTTTATCTGGTAAGTAAATTTAATTTTTCCTGCTCACGAAAGGGTCATCCCATTATTTTTGGGAC TGATGATTGTATTTTACTCCACTCTATCAGTTTTCTCGTAATTTTGTATGAAATTTTTCCTTTGCCATCTATGTGACTGATTTGACTTGTCTCCATGCGA CTTGCATGTCATTTGGGATATTCAGAAGAATATGAAGAAACATTCTTCTTTGATGTGTGGCTCAGGCTTTCAGATTTGTGGATGATTCTTATTTCTCTTA TGTTGAGCACTGCTAAACTTTGTTAGTTCATGTTATATCTTATCAATGGTGTAACTCTAGTGTATTTTCTTCGATAGGAATGAGAAGAACCAATTGCTTC TTGGCATTCGGCGGGCAAATCGACCACAAACTGTGATGCCTTCATCAGTTTTGTCAAGTGACAGCATGCACTTGGGGCTTCTTGCTGCAGCAGCTCATGC AGCTGCAACAAATAGTCGTTTCACCATCTTCTATAACCCACGTGCTTGCCCATCAGAATTTGTCATACCCTTAGCAAAGTATGTTAAAGCTGTGTATCAC ACTCGAGTCTCTGTTGGTATGCGCTTCAGGATGCTATTTGAAACAGAGGAGTCAAGTGTGAGGCGATACATGGGAACAATAACTGGCATTAGTGACATGG ATCCTGTTCGGTGGCCGAATTCATATTGGCGCTCAGTGAAGGTTGGCTGGGATGAATCCACTGCAGGAGATAGGCAACCTAGAGTGTCTCTTTGGGAAAT TGAGCCATTAACAACATTTCCCATGTATCCATCGCCATTCCCGCTTCGGCTTAAACGACCATGGCCTCCGGGGCTGCCTTCATTTCATGGCATGAAGGAT GAAGATTTTGGAATGAATTCTCCGCTGCTGTGGCTTCGAGACCCTGATAGAGGGCTTCAGTCTATTAACTTTCAGGGGATGGGGGTTAATCCTTGGATGC AGCAAAGGTTTGATCCGTCCATGCTGAACATGCAAACAGATATGTATCAAGCTGTGTCTGCCACTGCTCTTCCGGATATGAGGACTTTAGATCCTTCCAA ACAGCATTCTTCTTCCTTAGTTCAATTTCAGCAACCACAGAACTTCCCGAACAGGACTGCTGCTTTAATGCAGGCCCAGATGTTGCAGCAGTCACAGTCG CAGCAGGCTTTTCAGAATAATCAAGAGAATCAGCAGTCATCTCAATCTCAGGCACAAACTCAGATGCAGCAGCTGCAGCACCAACACTCATTCAATAGTC AGCATCAGCTTCATCACAACCAACAACCACAACAAATGCAGCAGCAACAACAGCAGCAACCACAACAAATGGTAGATAATCAGCAGATTTCTAATGCAGT CTCTACAATGTCTCAGTTTATTTCGGCACCTCAATCTCAATCACCACTGATGCAAGCTATCTCTTCACTGTCCCAACAACAAACGTTTTCTGATTCTAGT GCGAACCCTACCACTATTGTTTCTCCCCTGCACAATATCTTGGGTTCGTTTGCCCTGGATGAAAATTCCCACCTTCTGAACCTTCCTAGAACAAGCTCTT GGATTCCGGTTCAGACTTCAACTGCATGGCCACCTGCCAAGCGTGTTGCAGTGGATTCTCTCCTTTCTTCCGGGGCATCTCAATGTGCTATGCTACAGGC AGATCAGTTAGGGCAGCCACAGAGTACCATGTCAAAAAATGCTATTACATTACCCCCTTTTCCTGGTAGAGAGTGCTCAATAGATCAAGAAGGGAACAAT GATCCTCAAAATAATCTTTTATTTGGTGTTAATATAGAGCCCTCATCACTTCTAGTTCAAAATGGGATGGCAGGCCTTAAGGGAGTCGTCGGCAACAGTG ACTCCCCAGCCATGCCATTTCAGTCTTCTAATTTCATGAATAACACAGACATTGACTCTTCATTGAATCATGGAATGACACGTAGCATTGGTGATTCAGG CTTCCTGCATACCCAAGAAAATGCAGGGCAAGAAAATTCACCAAACAAGACCTTTGTCAAGGTTTATAAGTCAGGGTCCTTCGGAAGATCATTAGATATC ACTAAATTCAGCAGCTACCACGAACTGCGTAGTGAGCTTGCTCGAATGTTTGGTCTTGAAGGTGAGCTGGAGGACCCTCTGAGATCAGGCTGGCAGCTTG TATTTGTTGACCGAGAGAATGACGTTCTTCTCCTTGGTGATGGCCCTTGGCCGGAGTTCGTAAATAGTGTGTGGTGTATCAAGATACTTTCGCCTCAAGA AGTGCAGCAGATGGGCAACACCGGCCTTGAGCTTCTGAACTCTGTTCCAATTCAAAGGCTCTCTAATGGCATCTATGATGACTACATGAGCCGTCAGGAC CCGAGAAGTCTAAGCACTGGAATAATAAGTGTGGGATCATTAGAATACTAAATGATGTGACTGTCAATACTATGACACTTCTATCTCTTGTAATATTACC CTTGCTTCTCAACCTTTTGTCCATGGTGGGAAGTGCTGCCTAAATTTAGTTCTATAGTCCTACTCTTTAGCCTTTTTGTTTTCCTGTTTTTCCTGCTAGG ATTATTCATAAATATGATACTGTAACTATATGGCATCTTGTTATTGTGCTAGCTACAATATATACCATACTTAATCCGTTAGGAAATCAATGTGTGAAGA TAGTTCCTTCTTAAAGTTACATAACTTCATTTCTAATCTTGCTTTGGCTCAAATGGTTGTGTTGCTTGACTTGACTTAGTATTTTGGACGATGGTAGAAT CTCTCTTTTTCTAGAAAATATGGTAAAATGTTGGTTTGAGCATCTTTTAAGGAGACCATTGAGGTCCTTTGTTGGGAGAGTAGATCAATGGAGGTTACTC CATTCCTTAGAGGTAGAGGGGTGATAGAGTGTTATGACATTATTAATTTATATGAGTCAGAACTATATTG BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72488; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_57442
| Blastp | Auxin response factor 6 from Oryza sativa with 57.58% of identity |
|---|---|
| Blastx | Auxin response factor 6 from Arabidopsis with 81.44% of identity |
| Eggnog | auxin response factor(ENOG410YA3R) |
| Kegg | Link to kegg annotations (4328406) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019419302.1) |
| Pfam | Auxin response factor (PF06507.12) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |