| Id Trinity | FTRINITY_DN57893_c1_g1_i2 |
|---|---|
| Name Transcript | Ll_transcript_57066 |
| Sequence | CGTGCTCTTTTACGATTTTACCCGTACAATACAATGCACCGTACCGCACCTGATCACATTTCACACCTTCAATTCCCAATCCCTTTCTCTACAAAATCTA CCTCTCTCTTCATTCATTCAATCCTTTCGCTTCTTCTCGTAAGCCCCTACTCTCTCTCTCTATCTCTATCTACTCTCTCTCTCTATCTCTATCTATATTT GCATAATCGTTCATAGCACTTTCTCTTAATCTATTGTTTTTATTTTAGTGTTTACCTATTTTGGGTTTCTTTTGATTTGGAAACTAGATTCTGTGCTTGC CTGTTTTTCATCTCTACTTGTTTGTCCTCGTGATTTGTTTGTTTTTTCATCATGTTTGGTTGCTATGAAAATGAAAATCTATGGTTGCATGTGGCAGAAA CCCAGAATTTCAAACTTTTATTTTTAACCCTTTTTTTATTGTATTTCCAATTTGAAAGGAAATTATAGAAGCCCAGAATGCATAATCAATGTTTAGTTCT TTATCTGATAGAAAGTTTTGATTTTTGGATTTTTTTTATTGTGGGAATCTGTTACTATTTTAGTTTTTGTATTTTGATGTGTTGTGTAACAAACTAATGA TCTTAGTTTCCCTTGTAGTGTTGTTATATCTTAGCAGTTATGTTTTGACTGTGTTTTTTTGGTTTTTTATGCTTTTTCTTCAGTGAAGAAGGAATCTTTC TCTTTTGCGCGTGTCCTGGTCTCTTCTCCAATCCTCCACCATTACAGAAAGTAGTGTGTAATTTGATACCTGAATAGTGTGTATTCATATATCTATGTCA ATCGGTATGGAGGTTAAGCTGTGGAATGACAAGCGCGAGAGAGAAATGTATGACAACTTTGCGGAGCTCTATGCCATTATCAAGGCCACTGAGAGACTTG AGAAAGCTTATGTTAGAGATATAATCTCACCACAGGAGTATGAGTTAGAGTGCCAGAAGCTAATAGCTCATTTCAAAACCTTAGCTTCCACCCTCAAAGA CACTGTCCCGAGCATCGAGCGATTTGCAGACACTTACAAGATGGAGTGCCCGGCTGCAATTAACCGCCTTGTGATTTCCGGTGTGCCTGCCACCGTTGAG CACCGTGCGGCTGCTGTTGCCAATACATCCACCTCAGCTGCCATTGTGGCTGAGTGTGTCCAGAATTTTATTACATCAATGGATTCCTTGAAACTTAACA TGGTGGCCGTGGATCAGGTGTACCCATTGCTCTCAGACCTTCATGGATCGCTCAATAAGTTGTCAATTTTGCCGCCTGATTTTGAGGGGAAAACAAAATT GAAGGAGTGGATTGCAAGGTTGTCGAAGATGAGTGCAGCTGATGAGTTGACTGAACAACAGGCTCGGCAGCTTCACTTTGATCTGGAGTCTTCTTACAAT TCCTTTGTGGCTGCTCTGCCCAATGCTGGTACATGATTGAGTATGTGTGCTTGTAAAAATTAAATTGGCATATCTTTTTTCTTCTTGATTTACTGATGCT GTTTATTGGAGAGGAATTTTCTATTTGGTGACAACTTAAGCATGTATGTTTTAAGGCTGGTTATATACAAATTGTAGCTCTGTGTTGCTCATTGAAGGTT TGTTTTATTTTGTCGACGAGTTATTTAAGCTGTGGTTATTTAACTTATAGTTGTTCTGTTTGAGTTCCCCATACATTTCAGGCATGTAATATCCTAAAGA AACTTTAGTTTATAGTTGTATATATATTTCTGTCTTTAATATTACTAGATAGATTTCAATCCTACATTCCTAACCAAACCTAGAGATATGGAAGGTTGTC TAAATGTTTGACATTGACATCATAAGTAGCTTTTAGTTTGAAGAACTTGGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72499; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_57066
| Blastp | Vacuolar protein sorting-associated protein 28 homolog 2 from Arabidopsis with 84.62% of identity |
|---|---|
| Blastx | Vacuolar protein sorting-associated protein 28 homolog 2 from Arabidopsis with 84.62% of identity |
| Eggnog | Vacuolar protein sorting-associated protein(ENOG4111IQ4) |
| Kegg | Link to kegg annotations (AT4G05000) |
| CantataDB | Link to cantataDB annotations (CNT0002348) |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019424233.1) |
| Pfam | VPS28 protein (PF03997.11) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; |