Ll_transcript_258486

• Id Trinity: FTRINITY_DN57907_c0_g2_i17
• Name Transcript: Ll_transcript_258486
• Sequence: AAGATGTTTGTTGACTATAGTGAGCCCCAAGTGGAGAGAGTGTACTCATCATACTTGGAGCTCAATCTTGAGGATGTAGATCCCTGCATCTCTGGTCCAA AGAGGCCTCATGATCGTGTCCCTTTGAAAGAAATGAAGGCAGATTGGCATGCATGCCTCAACAACAAAGTTGGGTTTAAGGGTTTTGCTGTACCAAAAGA ATCTCAGAATAAGGTTGCAGAGTTCACATTCAATGGGACACCAGCACATCTTAAGCATGCAGATGTAGTTATAGCTGCTATCACCAGCTGTACAAATACC TCAAATCCTAGTGTAATGCTTGGAGCTGCATTGGTTGCTAAGAAAGCATGTGAATTGGGATTGCAGGTGAAGCCATGGATTAAAACAAGTCTTGCTCCAG GTTCTGGTGTTGTCACTAAGTATTTGCAGAGGAGTGGCTTGCAGAAGTATTTGAATGAGCTAGGGTTTAATATAGTTGGGTATGGATGCACCACATGCAT TGGAAATTCAGGGGATATTAATGAAGCTGTTGCATCTGCAATTACCGAGAATGATATAGTAGCAGCAGCTGTATTGTCTGGAAATAGGAACTTTGAGGGC CGAGTTCATCCATTGACAAGAGCTAATTACCTTGCTTCTCCTCCGCTTGTTGTTGCCTATGCCCTTGCTGGCACAGTGGACATTGACTTTGACACTGAAC CAATTGGGATAGGGAAGGATGGAACAAAGATATTCTTCAGGGATATTTGGCCATCCAGTGAAGAAATAGCAAATGTTGTACAATCCAGTGTTCTGCCCGA TATGTTTAGAGAAACATACAATGCAATCACCAAAGGAAATCCCATGTGGAATAATTTATCTGTTCCGTCTGGTTCTCTTTATGCCTGGGATTCTGACTCA ACTTATATTCATGAACCACCTTATTTTAAAGATATGAGCATGTCTCCTCCAGGTGCTCATGGAGTTAAGAACGCTTACTGTTTGCTGAACTTCGGAGACA GTATTACCACCGACCACATCTCTCCAGCTGGTAGCATACATAAGGACAGTCCTGCAGCCAGATTCCTTACGGAACGTGGGGTTGATAGACGAGACTTCAA CTCCTATGGAAGTCGCCGTGGGAATGATGAGGTGATGGCACGGGGAACTTTTGCCAATATTCGTATTGTTAACAAATTCTTGAATGGAGAAGTTGGACCT AAAACACTTCATATTCCCTCTGGGGAGAAGTTATCAGTCTTTGATGTTGCAACGAAATACAAGAGCGAGGGGCATGATACAATTATTTTGGCTGGGGCTG AGTATGGGAGTGGAAGTTCCCGTGACTGGGCTGCAAAGGGGCCAATGCTACTGGGAGTAAAAGCTGTCATAGCAAAGAGCTTTGAAAGGATTCATCGAAG TAATTTGGTGGGAATGGGTATAATCCCTATGTGTTTTAAGCCTGGGGAGGACGCCGATACTCTCGGATTGACTGGCCATGAACGTTACACAATTGATCTT CCGAGCAACGTGAGTGAAATACGACCTGGTCAAGATGTCACAGTGGCGACAGACAATGGGAAGACGTTTGTAGCTACCCTGAGATTCGATACGGAGGTTG AACTTGCTTACTTCAATCATGGAGGCATTTTACAGTACGTCATCCGAAACTTGATCAATGCCAAACATTGAATAAGGTAAAAACCAAGTCTTCAGGTCTA GTTGCTAGCAACCAATGACTCTGATTTTTATTGTTTGTCCAAATAATCTAGTATGTCTCGGCAAATGTCCTTTCAATGTGGAAGAAAATCCATGCTATTC AGCTATTGAATTAATAAACCAAGGAACTCAATGGCTATAATGAAGAGTTATAATGTTTGTCTTGTTTGCTATAGAAATGTAATTTATTGTTCTTATTTCC CTTATTTTGTCTGAGGATGAAAAGATCTTCTTTCCTAATTTTATGATTTGAGTTTTTGGCAAGCATTTACCTTCTGAATTGGACATAGATTAGTACCTGG AAGAGGATGATTGGTTAATTAGACAGGGAAAAGGAATAAACTTTTTTTTATGGGCAATTTTTTAGTATATTGGTATTTTGTTATGTGTGAGACTCCACCC TCAACGTCCT
• Tissue: flowers
• Gene name: LI_gene_72616;
• Additional information: details;

Expression of Ll_transcript_258486

FPKM

• FPAB: 3.6
• FPNAB: 8.6
• LF1: 11.6
• LF2: 7.5
• LF3: 6.9
• LF4: 8.6
• UF1: 10.6
• UF2: 7.8
• UF3: 6.4
• UF4: 7.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_258486

• Blastp: Putative aconitate hydratase, cytoplasmic from Oryza sativa with 85.84% of identity
• Blastx: Putative aconitate hydratase, cytoplasmic from Oryza sativa with 85.84% of identity
• Eggnog: aconitate hydratase(COG1048)
• Kegg: -
• CantataDB: Link to cantataDB annotations (CNT0000366)
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019423390.1)
• Pfam: Aconitase family (aconitate hydratase) (PF00330.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;