| Id Trinity | FTRINITY_DN57917_c0_g1_i39 |
|---|---|
| Name Transcript | Ll_transcript_259279 |
| Sequence | TTCTCCTTTCCTTCACGTATAGCATTAGTATTTAATTTGCCTCTCTTTTTTATTCTTCCATTTCATATTCTCTGCAATAAGACGTTTCTCTTTTCAATTT ATATATAGATAATTGATTGAGTTTCTTGTTCTATGTTTTGTCACCACAAATTACAATATCTCTGTCACTCTGCCTGCAAAACTATTCATGTTCTATTTGC TCAATTGCTGATCGATTAGGGTTTCATGGCAGTGGCTATACAGATCAACAAGTGAGAAACTTCATCTCTTTCTATAAATTAATATTTATGCACATGTGAT TTGTCACTATTATTGTGTCTGTCACTATTATTTTTTTGGGTGAAATCTGTCCCTATTATAAATCTGTTTACTTATTTATGAATCTTCTAGGGTTTTTTAT GACTTAATTAGAAATGTACATTTAAATAAACTCTATAATCGTAGCCCAGAATTACGTCTCATAGACCAAAAAGTAGGGACTAGGGAAAACTACACACCTC AAGGATCATGTAACTGTTATACATGAGTATGATCGGGAAGTGAAGCAAAATGATGAAGCATGTGTTAAAGGTTGGAGGATAGTGTGGGGAAATGCAAATT TTAGGATTAGTTAATGGAAGAGAGGAGTTTAGAACTTTAGATGGAGAAGAAGGCAAGACAACAGAGTTTGGGACTTAAAGGGGTGAATTGATGAGGAAAT AGAATAAAATATGAGGATTTTTTAAAATTTGAGAGAGAAGTGGTTTTTTTGTATTACCTGCTATAATTTCACCCTTTTCAAATAATGTTATCCTTGACTA TTTGATGATTTGATCATCCCGCTACCTCCTTGGGGGAGAAAAAGTGGTTTAAGGAGTAAATTTTGGGATGTGATTTTTTTTCCAAATTTATAAGAGCATT CCTATATCCTCCTATTAAATCCTCATATTAATTTTCTTATCCACAAATAAGTGACAGACAAATATCAGTTGTAAATCAATCATTAATAAATAAAATATCT TATTGTGACATATCATTTTCTTGTAAAAAAATGGAGGACGTTTCCGTTGCGTGCGAGAGTAGCTTGGTATCATCTGTGTAACTATCAAGTTCAATAAGCA AAAGGTTGAGGAAGTTTGTCTGTTTGTTTTTCCATCTAATCCAATTCTTCAATTCAGCAAACACCTTCACCATCTTCATCTATTCCATTCTCAAAATAAA CCCTGAAACTCAACTCCTCCAACCCTAACAATTATGTTGCAGCACAAACCACGACGTCGTTGCGAGGGCACAGCCATGGGCGCCGTCACTCTCGATCTCC GTCCCGGCCTTGGAATCGGACCCTTCTCTCTCGGGATGCGAATTAGTGAAGCATTTGCTCAGATAGAGCAACAGCCTAACATATACGATGTCGTGCATGT CAAGTATTACCATGAGGAGCCCCTGAAGATGGATATTGTTATAAGCTTTCCAGATCATGGCTTTCATCTTCGTTTTGATCCATGGTCTCAGGTGTTTTGC GTGTTTTCCATTTTGCCTCCGATGATTGATTTAATTCTCAAGTGTTTGTAGTTCTTGTTTGGAAAGGGAAACATGAGATGATGGGGCTCAGTTAATGAAT TTTTATTTTCGCGTGTTTAATAAGAAATGCAACTAGCTAATAATGCAAGTGTGCAACTTACTTCAAGGGAGATCACTAATGCGTTGGGTTTTAGGTTGAA ATAACATCAACATGAATCATCATCAAAACATAATTAAATCAGCTGATATATATTTGAAAATGCAGATTCAGAAAGTGTGTGAAGGATTCCTGCAGAAACT AAAGAGTATTGCAAGTTTGTGGCATATCAATTTTCATTAATTGATGTTGTAAAATGAGTTGCTCTCAGTTAGCCAATATAAATGAAAAGAAAAGACAACT TATTTGGTTGGAATCATGCCTCGTCCTTTGGAACATAGTTCCATAAGAACTGGTGTGTAGGAATCAACATTTCTGGAAGTGGAAAATAAATAGGTTCTGA ATGGTGTAGGATTCCTTTAACAAACTATCTACTTCATATTATTTGAAGTTCTGCTTGTTTGAAATTCACAAGAGAATAAGAAGAATACAAAATTGTCTTA GGGTCCTGTAATACTCCCTTTTTAAATGAGAAACCGTGGGAGTAATGTAATTGTAATTTGGGATTTAGTTATAGTTATTTGTCGTCAAGTTTGTTGTGGT GGACCACCTGGAGGTTTAGGGTATATTCACTTTGTTATAATTATGTGCTCCTTTCCACCAAGAAGACACTATGCTAGAGTTTCTGTAGTTGTTTACTTGA TATTGCTACTTTATTGTGCAAAAGATGATGGAGATTTTCAATTTCTTTTGCTTTTTTTTCTTAAAGATCTAAAGCTCCAATCTCTGTTGTGTGTAACACT TCCCATCATTTAAAGCTGCTGTATTGATACTATAGTGCCTCTATTTATTACTACCCTTACATGACAAGATGAATTTATGGTGACAAAGATTTCCAATACT ATTTTAGAGACTGCGGCTTATTGAAATATATGATGTTAAGCGGCTTCAAATGCGCTATTCCACTTCCCTGATTGGGGGACCAGCGAATCTAGCCACCTTC GTTGCTGTATATGCACTGTTTGGGCCCACATATCCTGGAGTTTATGATGGGGAGAGGGGTGTTTACACACTAATCTACCCGGGGCTTTCCTTTGCATTTC CTATTCCAAGTCAGTATACAGAATGCTGTCATAATGAGGAAGTGGAATTGCCACTGGAGTTTCCAGATGGCACCACACCAGTTACATGCCGTGTTTCAAT ATATGATAGTTCCTCTGGTAAGAAGGTTGGTGTGGGGTCCTTAATGGATAAGGCTTCTGCTCCTCCATTACCTGTTGGCAGCATTTACATGGAAGAGGTT CATGTTAAGCTGGGGGGAGAATTGTACTTCACTGTTGGTACTCAACTCATTCCTTTTGGTGCATCTCCACAGGATGTCTGGACTGAGCTAGGTCGTCCCT GTGGAATCCATCAGAAGCAGGTAGATCAAATGGTTATTCATTCTGCCTCAGATCTTCGGCCACGAACAACACTTTGTGGAGATTACTTCTACAATTATTT CACTCGTGGTCTGGATATCTTATTTGATGGGCAGACTCACAAAATCAAGAAGTTTGTGTTACATACCAACTACCCTGGTCATGCTGATTTCAATTCATAC GCTAAGTGCAACTTCGTTATCCATGGTTCAGATTCAGTTGAGGGACCTTTTCAGGAAGTACATAACAGCAAACAGAGGGCTATTACAACTAGCACAAAGT GGGATCAAGTGAAGGAAATATTTGGGGGTTGTGTGCGAGCTGCCATTCAAACACAAGGTTATGGAAGTAACCCTTTTGGTTCTACTCTTGTATACGGTTA TCAAAATATCGCTTTTGAGGTGATGAAGAATGGTTATATTGCAACTATAACTCTCTTCCGGTCATGATGATGGTTTCTTAATATTGGTTATGGAACTTCA CATGGAGTAGCTGGCTAGGTTTGTACGGTGAATGCGTATAAATAGTTCTGCCATATCATCATCATTATCGTGGCAAGGGGC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72714; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_259279
| Blastp | UPF0183 protein At3g51130 from Arabidopsis with 78.76% of identity |
|---|---|
| Blastx | UPF0183 protein At3g51130 from Arabidopsis with 76.19% of identity |
| Eggnog | Chromosome 16 open reading frame 70(ENOG410XT40) |
| Kegg | Link to kegg annotations (AT3G51130) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019422528.1) |
| Pfam | Uncharacterised protein family (UPF0183) (PF03676.13) |
| Rfam | - |
| GO | - |