Ll_transcript_259936

• Id Trinity: FTRINITY_DN57921_c0_g1_i21
• Name Transcript: Ll_transcript_259936
• Sequence: AAATACTCTCTCTTGTCTCGTATTACCCCTTTCTATTTTCTCTCTCTCTTTTCCCAAATCGGAAAAGAAAAAAGAAAACGATTACTCCATTTTTCTCTGT TAAACCCTAATCCCAAATCATCGATCCCAATTCGTTTCTCTCTCTATATATAAACTTCGATCCCTCACTTTCTCATCCCTCAATCGATTCAAAACCCTTT CCGCGAGATCCATTCTCACCATTTCTTTCCGATTTCGGATTCTGGTGAGTCAATGCTGGCGGTTATTCGGGTCAAGTAAATGGCGGATCCGCCAGGTTTC AACCACTTATCAACGCGTGTTCTTGTTTTTCAAGTTGAAGAAAACGAGGATTGTTGTTATTGTAGAGTTGAGTGAGAATGGTTAGTGTGCTGCGTGTGCA CCTGCCTTCTGAAATTCCCATTGTAGGATGCGAGCTCACACCTTATGTTCTGCTCCGTCGCGCCGATAAGACCATTACTACGGATGATGTTCATGAAACT GCTCCCTTAGATGGGCAATTCTTGCGCTACAAGTGGTATCGTGTGCAGAGTGATAAAAAGGTTGCTGTCTGTAGCATACATCCATCTGAGCAGGCCACAT TGCAGTGCCTAGGTTGTGTTAAGGCCAGATTACCTGTTGCCAAAAGTTATCATTGCACACCAAAGTGTTTTTCAGATGCATGGCAGCATCACCGGGTCTT GCATGACCGTGCTGCAAGTGCAGCTAATGAAAATGGAAATGAGGATGAGGAGGTATTTGGGCGCTTTAATAGTTCTGGGTCTGGGGTAAGCAATTCCAGC TTGTCTGCATCTGCGTCAAGTGCTATCTTGGTGAATGGGTCTGAAGCACCTTATCCAGCAGCTATCACTCAAAAAAGTGGTGAAATTTGGTATGAAGTTG GACGTTGTAAGACTTACACTCCAACAGCTGATGATATTGGTCATGTCCTTAAGTTTGAGTGTGTTGTAGTTGATGCAGAGACAAAACTGCCCATGGGGCA TGTCAATACTATACTAACTTCTCGTGTCATTCCTGCTCCTTCACCTACTCCACGCCGACTGATACCCATTGATGGGATGGGGCATTTAGATGCAGATGGG CGTATAACATCTTCTGGAACTTTTACTGTTTTATCATACAATATATTGTCTGAAGCATATGCCACAAATGATCTATACAATTATTGCCCGTCATGGGCTC TTTCTTGGGCATATCGCAGGCAAAATTTGTTGCGAGAAATTGTTGGTTATCGTGCAGACATTATTTGTTTGCAGGAGGTTCAAAGTGACCATTATGAGGA ATTTTTTGCTCCTGAGCTGGACAAACATGGTTATTATGGTCTTTACAAGAGAAAAACTATCGAGGTATACAGTGGCAACACCAATACAATTGATGGCTGT GCAACATTTTTCCGTAGAGACAGATTTTCTCATGTGAAGAAATATGAGGTTGAATTTAATAAGGCTGCACAGTCTCTAACAGATGCTATGATTCCAACTA CTCAGAAGAAAACTGCCTTGAATCGACTGGTCAAGGATAACGTTGCACTAATTGTTGTTTTGGAAGCAAAAGTTATCAATCAGCCGGTTGATAGTCCTGG AAAAAGACAGCTTCTTTGTGTGGTAAGCTCTTTTATGTTGCTGTGATTAATGACTGTTAGGTGCCCTTATTTTTGTGTGTCTACTCTTCACAGTCTATGA TGTGCATTTTGAATCTAGTGTTTTATTTTCATTGTGTATGCCCTTTTCTATTTGTTGAATACCAGAGCTTTTATCCAGGATGCTTCATGGATGTTGGTTT CTTATTTGTTAATAGTGGCCAGTGCTGGAGTACACACTTGCTACACCAAATAATTTTTAATTCAGTGTATAATTTTTATTGGTTCAACTGCTGAATCATG ACTATCTATCAACTTAGTTTTGTCTCAAATTTTGGAAAATGTGAACATCAGAAAAATGTAGTGAAGGAGCTCTTAATTTCATATATTTTAGAAGTATATA TCAATATAGTAGACAAGTTTCAGATCAATGTGAAATGATTTATATACATGATCTTTATGACTATACTTTTCAATTTAACTGTTATTTTTATAATTATTCA ATGGTGAAGATTTTTATTCAAGAAAATAAACTCAATGTAGCAAATATTAAAAATGTTGTGTTGGATGAGTGGACACATTAGACAAGATAAGATTATGAAT GAATGC
• Tissue: flowers
• Gene name: LI_gene_72742;
• Additional information: details;

Expression of Ll_transcript_259936

FPKM

• FPAB: 0.4
• FPNAB: 0.4
• LF1: 0.7
• LF2: 0.6
• LF3: 0.3
• LF4: 0.5
• UF1: 0.1
• UF2: 0.4
• UF3: 0.9
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_259936

• Blastp: Carbon catabolite repressor protein 4 homolog 2 from Arabidopsis with 72.47% of identity
• Blastx: Carbon catabolite repressor protein 4 homolog 1 from Arabidopsis with 72.77% of identity
• Eggnog: Ccr4-NOT transcription complex, subunit(COG5239)
• Kegg: Link to kegg annotations (AT3G58580)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019442961.1)
• Pfam: zf-MYND-like zinc finger, mRNA-binding (PF15801.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;