Ll_transcript_259940

• Id Trinity: FTRINITY_DN57921_c0_g1_i24
• Name Transcript: Ll_transcript_259940
• Sequence: ATAATTCGTTGATTGAAAAGAAAACATAACGCTCTATAAAAAAAAATTGATAGAAGGAAGAAAATGGCGTGATTTCTTGTTCTCACTCCATTTTCTGTGA TAACTTCCTAAAACCCTAATCTTCTCTTCGACCATTTCAATCCCTTTCTCTCTCACCAAATCTCCCTCCGATTAATCCAATTTTCGCTGATTAGGGTTTC GTGAAAAGCCATTATTCAAGTTTTGAAGTTAATGGAGGATTCAATTTTCATATTCGATTCTCATTCTGGTGGTGGATGATTCTTTGATACAGTTACACTG ATTCTTACTGAAAAAAGAGAAGAACATGCTGAGCGTGCTGCGTGTGCACCTTCCTTCTGATATTCCCATTGTAGGCTGTGAACTCACGCCTTACGTTCTC ATTCGTCGCCCTGATAAGACTGTTACTACCGATGATCTTTCGCAAATTTCGCCGTTAGATGGACATTTTCTGCGATACAAGTGGTATCGTGTACAAAGTG ATAAAAAGGTTGCTGTATGTAGTGTGCATCCATCTGAGCAGGCCACACTGCAGTGCATAGGTTGTGTTAAGGCCAAAATACCTGTTGCTAAAAGTTATCA TTGCACTCCAAAGTGTTTTTCAGATGCATGGCATCATCATCGTGTCTTACATGATCGTGCTGCAAGTGCAGTCAATGAAAATGGAAATGAGGAGGAGGAG GTGTTTGGCAGATTTAATAATTCTGGGTCAAGTGCTAGTTTGACAAATGGGTCTGCTCCTACGTATCCAGCAGCTGTTACACAACGAAATGGTGGTGAAA CTTGGTTTGAAGTTGGACGGTCTAAGACATATACCCCAACAGCTGATGACATTGGTCATGTCCTTAAGTTTGAATGTGTTGTAGTTGATGCCGGGACAAA ACTTCCAGTGGGGTATGCTAACAGTTTACTAACTTCCCGTGTCATTCCTGCTCCCTCGCCTAGCCCACGCCGCATGATAACTGTTGATGGGATGGGGCAT TTAGATGCAGATGGACGCATAACATCTTCAGGAACTTTTACTGTCTTATCATACAACATATTGTCTGATGCATGTGCCTCAAAAAATGATTTATACAGTT ACTGCCCCTCTTGGGCTCTCTCCTGGCCATATCGCAGACAGAATTTGTTACGGGAAATAGTTGGGTACTGTGCGGATATTATCTGTCTTCAGGAGATTCA AAGTGACCACTATGAGGAATTTTTTGCCCCTGAATTGGACAAACATGGCTATTATGGTCTTTACAAGAAAAAAACAAATGAGGTATACAATGGCAACCCC AATGCAATCGACGGTTGTGCAACATTTTTCCGCAGAGACAGATTTTCACATGTGAAGAAATATGAGGTTGAATTCAATAAGGCTGCACAGTCTTTAACAG ATGCTATCATTCCACCCAATCTGCAGAAAACTGCCTTGAATCGGCTGGTTAAGGATAATGTTGCGCTAATACTGGTTCTAGAAGCCAAAGTTAACAATCA GCCTGTTGATAGTCCAGGGAAAAGACAGCTTCTATGTGTGGCAAATACACATATAAATGTCCCCCAGGATTTAAAGGATGTCAAACTCTGGCAGGTGCAT ACTCTCTTAAAAGGGTTGGAGAAAATAGCTGCAAGTGCAGACATTCCAATGCTGGTTTGTGGAGACTTTAATTCAGTTCCAGAAAGTGCACCTCATGCAC TTCTTGCAATGGGGAAGGTAGATCCATCACATCCCGATTTAGCAGTTGATCCGCTTAACATATTGCATCCTCTCAACAGATTGGCTCACCAATTGCCACT GGTCAGTGCATATTCATCTTTTGCAAGAACTGCTGGCCTCGGATTTGAGCAGCATAAACGGAGACTGGACAGTACAACGAACGAGCCTTTATTCACACAC TTCACTAGAGATTTTATTGGCTCTCTAGATTACATATTTTATACAGCGGATTCATTGGTTGTGGAGTCATTACTGGAGTTACTGGATGAGGAGAGTTTAA GGAAAGACACAGCACTCCCTTCTCCCGAATGGTCCTCCGATCATATAGCTCTCTTAGCTGAGTTTCGCTGCTGCAAAAATAGATATAGGCGTTGACTCAT AAGGTCAAATGCAGATACAGATAAACATAAAGGTTAAAAGAAGTTGTTGGTTGATTAGTTATTGTAAAATTGGTAGATCATGCCTTTGCCTTTTTTCCAG GTATCTCCATGTGGAGGTCCTTGCAATGATCTGCTATGTATTATTGCACCTTTTGTCTCATAGATAAGTTGAGTTATGCTTTACTGATTTGCCTCTGGCC CCAATCATTTTTATAAAATGGAAATTTTCTTAGTGTGTGTGCAAGCTACAAATTTTATAGATTTCACCTTTTAGGCTCCTCCAAATATGATTATGACCCT ATCCAAGGTAGTATATATCAAACATGACTTTAGTATATTATTTCCACCCTGGCTCATTGGGAAGGTAACATTGCCTTCTGCTCTTGAGGTCATGATTTAA AATCCCGTAACGGCCTCTTCGCTCGTAGGGATAAGACTTTATACATATATTATCAATAGATTCTTAGTTTTAGTGCATTGTTATAAAGAATATGATAATT CCAACATTTAATTTTTTTTCTATCCCACCTCGTAAATTATTATAAGCAAATGAAAAACTTAATTCCAAGTCTTGTAAGAATATTACTAGCATGTTTTCCT AGCAGGA
• Tissue: flowers
• Gene name: LI_gene_72742;
• Additional information: details;

Expression of Ll_transcript_259940

FPKM

• FPAB: 0.3
• FPNAB: 0.8
• LF1: 0.3
• LF2: 0.4
• LF3: 0.6
• LF4: 0.7
• UF1: 0
• UF2: 0.4
• UF3: 0.4
• UF4: 0.4

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_259940

• Blastp: Carbon catabolite repressor protein 4 homolog 2 from Arabidopsis with 73.15% of identity
• Blastx: Carbon catabolite repressor protein 4 homolog 2 from Arabidopsis with 73.18% of identity
• Eggnog: Ccr4-NOT transcription complex, subunit(COG5239)
• Kegg: Link to kegg annotations (AT3G58580)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019444136.1)
• Pfam: zf-MYND-like zinc finger, mRNA-binding (PF15801.4)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;