Ll_transcript_258430

• Id Trinity: FTRINITY_DN57938_c1_g1_i15
• Name Transcript: Ll_transcript_258430
• Sequence: CAAACTCTTCTCTCTCTCATACCAATCTTTCTCTCTCTAGGGTTTCGTCGCTAACTCTCTCACACACACTGCTCATCACAATCGTAACACTCTTCCTCTC ATTCACTCACTATCGCTTCCTTCAATTTTCAGGCTAAAGGATTCTAGTTATTACAGAAAAAGAAGGGAAGTCGTGTGGTGTTGGGGTTTTATACCGTGGC GGACGAATGCTGCTTGATGCTTGATGATAGTTGCAATGGACTTGAATGCCTCGCCAGTCCCGGAGGAAGAGGAAGATATTTTTGAGGGACATACTGTCGA AGAGTATTCTGCAACAGAAGAACGCGTGGAAAGTGGAGTTGATATAGCACGCCGGGAGCGTGAAGAAAGAAAGAGACGATTGAAGAGAGAACGTCCAGAT GATAGGCCTGTGCATGTATCACAGTCACCTGGATATGATCAGTTGTTTCATACCAAGAGCCTTAAATCAAATGAGAGAAGCAGGCTTCCTCCAGGGTGGT TGGATTGCCCTTCATTTGGTCAGGAGATTTGTTACATGGTACCTTCTAAGGTTCCACTTGGTGAATCATTCAATGACTGCATTTTACCTGGTAAAAGATA CTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTTGTGATTGATTTAACAAATACTTCTCGATACTATCCTGTGTCAGAT TTAAAGAAAGAGGGTATCAAGCATGTTAAGATTCAATGCAAGGGGCGTGATTCTGTACCTGATAATTTAGCTGTGAATCAGTTTGTCTATGAGGTTACTC AATTTCTTGTACGTCAAAAACACTCGAAGAAGTATATTCTCGTTCATTGTACACACGGGCACAATCGTACTGGATATATGATCATCCATTATCTGATGCG TTCTATGTCAATGTCTGTTACTCAGGCAATAAAAACATTTTCTGACGCACGCCCTCCAGGAATCTACAAACCTGATTACATTGATGGATTGTACACATTT TATCATGAAAAGAAGCCTGAAATGGTAGTTTGTCCTCCTACTCCTGAGTGGAAGAGATCTTCTGAACTTGACCTCAATGGTGAAGCAATTCCAGATGATG ATGATGATGGAATACCAGACCCTCAGTTGCAGGAGAACCATGAGACTGACACACGAATGACAAATGATGACGTTTTGGGAGATGAAATACCTATTGATCA ACAAGAAGCATTCCGGCAGTTCTGTTATCAATCACTTAAATTGGGTGTTGGGGCCAGAGGACATGCACAATTTCCAGGTTCACATCCCGTTTCTCTTAAC AGGGATAATTTGCAGTTGCTACGACAGCGTTATTATTATGCGACATGGAAAGCTGATGGTACGCGATATATGATGCTTATAACTATGGATGGATGTTACT TAATTGACAGAAATTTCAACTTTCGAAGGGTTCAAATGAGGTTTCCTTGCAGGAGTACAAGTGATGGTTTGGGCGAGAGAACCCATCACTTCACATTACT TGATGGTGAGATGGTTATTGATACATTGCCAGATTCGCATAAGCAGGAGAGAAGATACCTTATATATGATATGATGGCAATCAACCAAGTATCCATAATA GAGCGACCCTTCTATGAACGGTGGAAAATGCTTGAGAAAGAAGTGATTGAACCTAGGAATCAGGAACGGCAGAATGGATACAAAAGCAAAAATCCTTACT ATAGATATGACCTGGAACCATTTAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCAATAAGCTTTTAACGGAATTCATTAAAAGACTCTCGCA TGAGGCAGATGGTCTCATATTTCAGGGTTGGGATGATCCTTATGTACCTCGTACTCATGAAGGCCTTTTAAAGTGGAAATATGCAGAGCTGAATTCAGTT GATTTTCTCTTTGAGGTTGATGGTGATCGTCAGCTACTTTATATCTATGAACGAGGAAAAAAGAAACTCATGGAAGGGAATACGGTTGCATTCGGAGATG GTTCAGATCCCGCGCTTTATTCTGGGAAGATCATAGAGTGTTCTCGGAATCCTGATACACAGGAATGGGTATTCATGCGAGTCAGGACAGATAAATCTAC TCCAAATGAGTTTAATACGTACAAGAAGGTGATGCGAAGTATAAGAGACAACATCACACAGGAAGATTTGTTGGATGAAATAAATGAGATAATTCGCCTT CCCATGTATGCTGACAGGATACAAATCGATAGCAAAGCCAATCAGCATGCTGCGATGGCTCGACGAAAGGACCGTTGATTATATCAGGAGTTCATGCTTG TAACTTTTTTTCTACGGCGGCAGAATCATATGTTGGCGATGTATGATATCAGGTGAAAACATGATCAAAGGTATCCATTGATGTCTGCCTATGGGTTTTA TTTGAAATTGTACTGGATTCCATCACCAAAGGTTGCTCATATTATGTAACCAGTTAGAACTTGATGCAATTACTGATGTGTTGCTGAGTTGTATGATGCA GTATTTACAGCTCAAGTTCTGACCTGAATTCATTGCCTATGGTTGTGCAGATCAAGAGCCTTAGTTTTAGGGTGGTAATGTATATTATCAAATTTATTTT AAGTAGTTATTGTAAGTTGAAATAGTTGGTTGAAATTTGAAGTGTATGTGAATATCAAATTGAGAATCATAACAAGCCTTCTATTATTCTAACCTGTAGG AGTTTCATGGCATGGCCCTAGTGCCTTGTTGATAATTTGATAAGTAGATAATTCTATCAACATTTCTTTCTGGTTAATTATAAGTAATGCAACTTAATAT TTGATTTGAGGGATTTCACTTTTGTTAAATGTATGCACTGTAGACCTATATTCAAATCACACCAATTAAGATGAGTCTGAGGAAGGCACATAACTTAATA TTTGATTTGTGGGATTTCACTTTTGTTAAATGATTTCACCAATTTTTATCTTAGTATACCATGACATACATATTCACATATATTATTGCATCATAAACTA TATATAAC
• Tissue: flowers
• Gene name: LI_gene_72888;
• Additional information: details;

Expression of Ll_transcript_258430

FPKM

• FPAB: 7.3
• FPNAB: 7.8
• LF1: 6
• LF2: 7
• LF3: 8
• LF4: 6.5
• UF1: 6
• UF2: 6.6
• UF3: 7.2
• UF4: 6.8

Labels

• FPAB: abscising flower pedicels
• FPNAB   : non-abscising flower pedicels
• LF1: lower flowers stage 1
• LF2: lower flowers stage 2
• LF3: lower flowers stage 3
• LF4: lower flowers stage 4
• UF1: upper flowers stage 1
• UF2: upper flowers stage 2
• UF3: upper flowers stage 3
• UF4: upper flowers stage 4

Annotations of Ll_transcript_258430

• Blastp: mRNA-capping enzyme from Mus with 34.68% of identity
• Blastx: mRNA-capping enzyme from Homo with 35.34% of identity
• Eggnog: Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate (By similarity)(COG5226)
• Kegg: Link to kegg annotations (24018)
• CantataDB: -
• Mirbase: -
• Ncbi protein: Link to NCBI protein (XP_019434230.1)
• Pfam: Dual specificity phosphatase, catalytic domain (PF00782.19)
• Rfam: -
• GO: Links to GO: General; Genes and gene products; Annotations; Ontology;
  Links to GO: General; Genes and gene products; Annotations; Ontology;