| Id Trinity | FTRINITY_DN57938_c1_g1_i17 |
|---|---|
| Name Transcript | Ll_transcript_258432 |
| Sequence | CAAACTCTTCTCTCTCTCATACCAATCTTTCTCTCTCTAGGGTTTCGTCGCTAACTCTCTCACACACACTGCTCATCACAATCGTAACACTCTTCCTCTC ATTCACTCACTATCGCTTCCTTCAATTTTCAGTAATGTGTTGCTCCTTGGAGCTGCGAGGACATGAGAGAAAGAGAATTGAAGTGTGATTCATTGCTTGT TTTTATTATTATTTTATATTTGTGAAAATTCGTAAGAGGGTGAGTTTAATGCAATGTTAATGTTGTTACTTAGCGATCATGAAGTCACGAGTTCAAATAC CGGAAACAGGCTCCCGGCTTGCCGTGTAAGGCTGTTTACATCTATCCTCCACATGACCTTATTAAGCTAAAGGATTCTAGTTATTACAGAAAAAGAAGGG AAGTCGTGTGGTGTTGGGGTTTTATACCGTGGCGGACGAATGCTGCTTGATGCTTGATGATAGTTGCAATGGACTTGAATGCCTCGCCAGTCCCGGAGGA AGAGGAAGATATTTTTGAGGGACATACTGTCGAAGAGTATTCTGCAACAGAAGAACGCGTGGAAAGTGGAGTTGATATAGCACGCCGGGAGCGTGAAGAA AGAAAGAGACGATTGAAGAGAGAACGTCCAGATGATAGGCCTGTGCATGTATCACAGTCACCTGGATATGATCAGTTGTTTCATACCAAGAGCCTTAAAT CAAATGAGAGAAGCAGGCTTCCTCCAGGGTGGTTGGATTGCCCTTCATTTGGTCAGGAGATTTGTTACATGGTACCTTCTAAGGTTCCACTTGGTGAATC ATTCAATGACTGCATTTTACCTGGTAAAAGATACTCATTTAAACAAGTGATACATCAACAGAGAGTTTTAGGGAGAAAACTTGGTCTTGTGATTGATTTA ACAAATACTTCTCGATACTATCCTGTGTCAGATTTAAAGAAAGAGGGTATCAAGCATGTTAAGATTCAATGCAAGGGGCGTGATTCTGTACCTGATAATT TAGCTGTGAATCAGTTTGTCTATGAGGTTACTCAATTTCTTGTACGTCAAAAACACTCGAAGAAGTATATTCTCGTTCATTGTACACACGGGCACAATCG TACTGGATATATGATCATCCATTATCTGATGCGTTCTATGTCAATGTCTGTTACTCAGGCAATAAAAACATTTTCTGACGCACGCCCTCCAGGAATCTAC AAACCTGATTACATTGATGGATTGTACACATTTTATCATGAAAAGAAGCCTGAAATGGTAGTTTGTCCTCCTACTCCTGAGTGGAAGAGATCTTCTGAAC TTGACCTCAATGGTGAAGCAATTCCAGATGATGATGATGATGGAATACCAGACCCTCAGTTGCAGGAGAACCATGAGACTGACACACGAATGACAAATGA TGACGTTTTGGGAGATGAAATACCTATTGATCAACAAGAAGCATTCCGGCAGTTCTGTTATCAATCACTTAAATTGGGTGTTGGGGCCAGAGGACATGCA CAATTTCCAGGTTCACATCCCGTTTCTCTTAACAGGGATAATTTGCAGTTGCTACGACAGCGTTATTATTATGCGACATGGAAAGCTGATGGTACGCGAT ATATGATGCTTATAACTATGGATGGATGTTACTTAATTGACAGAAATTTCAACTTTCGAAGGGTTCAAATGAGGTTTCCTTGCAGGAGTACAAGTGATGG TTTGGGCGAGAGAACCCATCACTTCACATTACTTGATGGTGAGATGGTTATTGATACATTGCCAGATTCGCATAAGCAGGAGAGAAGATACCTTATATAT GATATGATGGCAATCAACCAAGTATCCATAATAGAGCGACCCTTCTATGAACGGTGGAAAATGCTTGAGAAAGAAGTGATTGAACCTAGGAATCAGGAAC GGCAGAATGGATACAAAAGCAAAAATCCTTACTATAGATATGACCTGGAACCATTTAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCAATAA GCTTTTAACGGAATTCATTAAAAGACTCTCGCATGAGGCAGATGGTCTCATATTTCAGGGTTGGGATGATCCTTATGTACCTCGTACTCATGAAGGCCTT TTAAAGTGGAAATATGCAGAGCTGAATTCAGTTGATTTTCTCTTTGAGGTTGATGGTGATCGTCAGCTACTTTATATCTATGAACGAGGAAAAAAGAAAC TCATGGAAGGGAATACGGTTGCATTCGGAGATGGTTCAGATCCCGCGCTTTATTCTGGGAAGATCATAGAGTGTTCTCGGAATCCTGATACACAGGAATG GGTATTCATGCGAGTCAGGACAGATAAATCTACTCCAAATGAGTTTAATACGTACAAGAAGGTGATGCGAAGTATAAGAGACAACATCACACAGGAAGAT TTGTTGGATGAAATAAATGAGATAATTCGCCTTCCCATGTATGCTGACAGGATACAAATCGATAGCAAAGCCAATCAGCATGCTGCGATGGCTCGACGAA AGGACCGTTGATTATATCAGGAGTTCATGCTTGTAACTTTTTTTCTACGGCGGCAGAATCATATGTTGGCGATGTATGATATCAGGTGAAAACATGATCA AAGGTATCCATTGATGTCTGCCTATGGGTTTTATTTGAAATTGTACTGGATTCCATCACCAAAGGTTGCTCATATTATGTAACCAGTTAGAACTTGATGC AATTACTGATGTGTTGCTGAGTTGTATGATGCAGTATTTACAGCTCAAGTTCTGACCTGAATTCATTGCCTATGGTTGTGCAGATCAAGAGCCTTAGTTT TAGGGTGGTAATGTATATTATCAAATTTATTTTAAGTAGTTATTGTAAGTTGAAATAGTTGGTTGAAATTTGAAGTGTATGTGAATATCAAATTGAGAAT CATAACAAGCCTTCTATTATTCTAACCTGTAGGAGTTTCATGGCATGGCCCTAGTGCCTTGTTGATAATTTGATAAGTAGATAATTCTATCAACATTTCT TTCTGGTTAATTATAAGTAATGCAACTTAATATTTGATTTGAGGGATTTCACTTTTGTTAAATGTATGCACTGTAGACCTATATTCAAATCACACCAATT AAGATGAGTCTGAGGAAGGCACATAACTTAATATTTGATTTGTGGGATTTCACTTTTGTTAAATGATTTCACCAATTTTTATCTTAGTATACCATGACAT ACATATTCACATATATTATTGCATCATAAACTATATATAAC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72888; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_258432
| Blastp | mRNA-capping enzyme from Mus with 34.68% of identity |
|---|---|
| Blastx | mRNA-capping enzyme from Homo with 35.34% of identity |
| Eggnog | Second step of mRNA capping. Transfer of the GMP moiety of GTP to the 5'-end of RNA via an enzyme-GMP covalent reaction intermediate (By similarity)(COG5226) |
| Kegg | Link to kegg annotations (24018) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019434230.1) |
| Pfam | Dual specificity phosphatase, catalytic domain (PF00782.19) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |