Id Trinity | FTRINITY_DN57942_c1_g1_i12 |
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Name Transcript | Ll_transcript_258535 |
Sequence | AACTTAAGCAAATTTTGCTTTGTCACTAAGTTACCAATGCCAATTGGTCCATAAGGGATCGATACAAAATTAGCAATGCCTATTGGTCCATTGGGGCATG GTAAAAATTTAGCAATATGTATCGGTCCAACTATTGTAATTGTGTATCTGATTTTGAGACAGACTAAAAGATTAAAATTTATCCTATATAAATGAATTTG TTGGCATCGAGATTAGTTCTTTTCTCATACAATACTTTCCTTATATAAAGAAGTTAAGGAATGCATAGAAATGATGAAGGGTGTTGATTGTCATTTCACA AAAGACAGAATAGGAGTAAAAATTATAAAGTTAAAAAGAGAAGAGTAGAAAAATGAAAATAATTTAAAATAGGAGCATTGTTATATTCTCCTAGTCCTAC ATACGAAAAGTTGACTTGACACATGTCACTTGTAAATAGATGTAGTAGGAGGATATATCATTTTTTCTTTTTTCTGTATTATTTTTATAAGAGTGAAGAA AGGAGAAAGAAAGAGAGAAAGAGAGAAAGAGAAGAAAGAGAGAAAGGAATAAGCGTTGTTTGACATTTGTTGATTGAGGTTTTGAAGAGGAATTTTCTGA GTTGTACTGAAAATTATTTATGGGCTGAGGTGCATTTTCATGGGAGGTGTGGGAGATGAAGAACCAGCTTTAAAACGAATCAAATTGTCCTCTATAGGAT TAGTTCCGTCGTCTAACGTTTCTTCATCGAAAGAGCCTGTTCGAGGCTCGTCTAGTGGCTTCATGGCTCGGCCCGTATCGTCCCCCGAAGGGGACAGACA AGTTATCGGTTCGAGAGGGTTGATTAAAAGGGAAGAGTTTGTTAGGATAATTTCGAAGGCATTGTATTCTCTAGGTTACAGAAAGAGTGGGGAATATCTA GAGGAGGAGTCTGGAATACCTTTGCACACGTCTGCGGTCAATATGTTGATGCAGCATATACTTGATGGAAATTGGGATGAGAGCGTAGCGTCATTGCATA AAATTGGTCTAGAAGATGAAAGCATTGTTAGGTCAGCTTCCTTTTTAATATTGGAGCAGAAGTTTTTCGAACTTTTAGATGGTGAAAAGGTAATGGAAGC GTTGAAGACCTTGAGGACTGAGATTGCTCCACTTCGCACAAATAGTCGTAGAATTCATGAACTTACTTACTGCATAGTGTCTCCATCTTGTAAGCTAAAT ACTATAAGGGTCGGGTCTCGCTCTAAGCTTCTAGAGGAATTGCAGAAACTGCTTCCCCCAACAATAATGATACCTGAAAAGAGGCTGGAATATCTAGTTG AGCAAGCCCTTATATCGCAGCGAGAGTCTTGCCCATTTCACAATTCATCGGATAAGGAGATTTCATTATATTCTGATCATCATTGTGGAAAAGATCAGAT TCCTTCTAGAACATCACAGATATTAGAGGCCCATGATGATGAAGTCTGGTTTGTACAATTTTCACATAATGGAAAATATTTAGCTTCAGCATCAAATGAT CGATCTGCTATCATTTGGGAGGTAGTATTTCATTTGATCTAACCCTTTTCGTTTTGTCTTTGCTGTTCTTATACTTTCATATTATTATTTTTTCATTTTG TCATTGCTTGTGTTTTGATGTTAATACTCATATTGCAAGTCCCAACTGTAATTTTTCTCTTCATAACACATACAAATACCCTCATTGGTCAATGCACAAA ATTTGCGCACTCTCACACTGACACCTATATATAGTATGACCTAGTGCTACCGAATTAGGTTTCAGATTTTCTTTTTGTTTTAAAGGTTGACGTGAATGGT GGACTGTCTGAAAAGCGTCGATTATCTGGTCACCAGAGACCTGTTTCTTCTGTTTCTTGGAGTCCTGATGACCAAGAGCTCCTCACATGTGGAGTAGAGG AGGGTATTAGGCGTTGGGATGTCTCTACTGGTAAGTGCCTTCAAATTTATGAAAGAACTGGTGCTGGCCTAGTGTCTTGTGCATGGTTTCCAACTGGGAA ATATATACTTTCTGGCGTAAGCGACAAGAGCATTTGCATGTGGGAATTAGATGGGAAAGAGGTGGAGTCTTGGAAAGGACAAAAAACGCTTAAGATCTCT GACTTAGAAATAACAGGTGATGGGGAAGAGATTATAAGTATTTGTAAAGACAATGCAGTGCTGTTATTAAACAGAGAAACGAAGGATGAGAGATTTATTG AAGAGTATCAGACAATAACCTCATTTTCGTTATCAAAGGATAACAGATTCTTGTTGGTTAACCTTTTGAGCCAAGAAATACATTTATGGAATATTGAAGG TGATCCTAAGCTTGTTGGCAAGTACAAGGGTCATAGGCGCACCCGGTTTATTGTCAGATCTTGCTTTGGTGGACTTAAGCAAGGTTTTATTGCTAGCGGA AGTGAGGATTCACAGGTATACATATGGCACAGAAGCTCAGAGAAGCTTATAGAGGTATTGCCTGGTCACTCAGGGACTGTTAATTGTGTAAGCTGGAATC CTGCTAACCCACACATGTTAGCCTCAGCCAGTGATGACCGCACAATTAGGATATGGGGCCTAAATTGTATGAAAGTTATGTACCAAAATGCACACACCAA TGGCATCCATTACTGCAATGGGGGGAACTTAGATGAAGCCAAACTCATTTTCAATTGATTTCTGTTCTTTTCTCTCATTGCAATTGTGTAACCTTTTACT ATCAACACAACAAGTAGACAATCATATAAAACATGCATGTGACTTCTCATCATTCTCTTCATAAATTTCATGTCCATTTATGTGGGATTTTTTTGTGGCA GTCGTTTTTAAATTCTTTTACCAAAATCTCTTATTGTATAGCGTAATATCTATACATTGTCAATGTAAATATTTATAAACATTCAGACTATCATCC BLAST |
Tissue | flowers |
Gene name | LI_gene_72906; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_258535
Blastp | WD repeat-containing protein 26 from Silurana with 33.23% of identity |
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Blastx | Uncharacterized WD repeat-containing protein C343.04c from Schizosaccharomyces with 27.97% of identity |
Eggnog | WD repeat domain 26(ENOG410XQ2U) |
Kegg | Link to kegg annotations (733878) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019432015.1) |
Pfam | WD domain, G-beta repeat (PF00400.31) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |