| Id Trinity | FTRINITY_DN57945_c2_g1_i3 |
|---|---|
| Name Transcript | Ll_transcript_260440 |
| Sequence | CACCAAAGACCATAAAACAAATCAAGATATTTGACTTTTTTATCACACCCCATTCCCTCAACTTCACCAAATTATTTAATACCCTAAAATACCCCCACCT CCTACAACTACCTACCCCCATCACGTCTCTCTACCCAACAAACAACGTTCGCCTACACTCCCTTTCACCCTTTCATCTTTCCTTATAAAACCCTCAACTT TCTCTTCCCCTCTTCAGCCGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGACTAAGTCACATTACCCAAAAATGTCTATC TCCACCGCTAACTCTTTCATTCTCACCAAATCCTTATTCTCTCCCACCCAACTCAACCAATCACCTTCTTCTTCCATTCTTACCAACACCACCAGGCCCA GGCCCAAATCTTCAATTCTCGCCGTCCATTCCGCCGAGCCCGCCAAGAACCCCGTCGTTTCCGAAAAGCCCATCAAGCCATCGGCTTCTTCTCCTCCCGC TTCCACCAGAAATGTGGGACAAGTGAAGTGGGCCATTGACAGCTGGAAAACTAAGAAGGCTCTTCAGCTTCCTGAGTACCCGAGCCAGGAGGATCTTGAC TCTGTACTCCGGACCCTGGATGCTTTTCCGCCTATCGTCTTCGCCGGAGAGGCAAGGACGTTGGAGGACCGTCTCGGCGAGGCTGCAATGGGAAATGCTT TTCTATTGCAAGGTGGAGATTGCGCTGAGAGCTTTAAGGAGTTTAATGCTAATAATATTCGTGATACCTTTAGAATCATTCTTCAGATGGGTGTTGTTAT GATGTTTGGTGGTCAAATGCCAGTTATCAAGGTGGGAAGAATGGCGGGTCAGTTTGCGAAGCCGAGATCTGATGGATTTGAGGAGAAGGACGGTGTGAAG CTGCCGAGTTACAGAGGGGACAACATAAATGGAGATGCTTTTGATGAGAAATCGAGGATTCCTGATCCTCAGAGGATGATTAGAGCTTATTGTCAAGCGG CAGCTACTCTCAATCTCCTGAGGTCTTTCGCCACAGGAGGGTATGCTGCTATGCAGAGGGTTACTCAGTGGAATTTGGACTTCACAGATCACAGTGAGCA GGGAGACAGGTATTTATTTCGATATTTAACCTTCGGTATGCTTTTTGTTACTTCATTTGCTGTTATGATTCGATATGTGTTTCATCACCTGTATAAATAA CTTTTTTGTGTCTGTTTACTACCCTTTTCTCATCAATACTGCTCCATGCTACAAGTTCCATCTTCCTGTTACAGAAAATCTTGATTGGCCTTTGTTTTGG TTGTTGCTATTTTTAGGTGGTAAAAAGGATAAAACTAATTTGAAAAAAATAATCTCTTTTTGTTTCATTAGAGACAAGGTAAATGCTAGTTGAGAAGTAG TTGTGAACTTGTGGTGCATGATAGGTGATCAGAATTGGGTTGTTGTACCTCATAAATGATGATTCTGACTTCAACAGAACAACTTGTCCTAGTCAATTTT GTCTCAATATGTTAGATTAAAAATCCCGGGCTCCATTAGGTGGGGACCTCCTGTATTGACCACAATGAAAAATATTTTATGTGCATCTATTATGACAACT TCTCATATAAAAGTAAAGTTATTAAAAAACTTGTCCATCCTTGTTTTAGAAATGACATGGCTCTATGTTAACTCAACATATTTTTGTGTGAATAATGATA TAGTTATTCATATGTAGTTAGTATCTGCCACATGTTTCACATAAAAGTGACTTGTAAAATTTCATTGGTAATTCCAATCTACCCAGGGTGTGTTTGTCTA TAATTCACTTGTTTTAATGGCGAGAAATCATTTGTTGGTCTTGTTTTATTTTTTCCACAAAGCTGTGCGATCAATGTTTTTAGATTGCATACATATTTGT GTAATTGATGTAACTTTTGCATACATAGAGCTAAACTTAATGGTTCATAATAGAAGTTGTAGTTTATATATTGCTAAATTTTGCAGTATTGGACATGTAG ACAAATACATAGATTGTTGCAGTATATGTTTACAGTTCCTACTTGTGTTAATCTTTGATGCATCATGGGATAAATTAAATCGGTTGTTGGCACGATAGGT ACCGAGAGCTTGCTCACCGAGTCGATGAGGCCCTTGGATTCATGGGGGCTGCTGGACTCACGGTGGACCATCCCATTATGAAAACAACTGAATTCTGGAC TTCTCATGAATGCTTGTTATTGCCATATGAACAATCACTCACTAGGCTGGACTCAACCTCGGGTCGCTACTATGACTGCTCTGCCCATATGCTTTGGGTT GGTGAACGAACCAGGCAGTTGGATGGTGCCCATGTTGAGTTTCTAAGAGGAGTTGCTAATCCCCTTGGCATTAAGGTAAGTGATAAGATGGATCCAAATG AGCTTGTTAGACTCATTGAGATCTTGAATCCCCAAAATGAACCAGGGAAGATAACTGTGATCACAAGGATGGGACCTGAACATATGAGGATAAAACTTCC ACATCTAATCAGGGCAGTACGCAGAGCCGGCCAAATTGTTACGTGGGTCAGTGACCCTATGCATGGAAACACCATTAAGGCTCCATGCGGACTCAAAACT CGCTCCTTCGATGCCATCCGGGAGCCTGGTTCCTGCCGAATAGGTGTCAAAGTATTTGCATTGGTGGTGAATAGTGGGCTACCAAAAATTCCATTACTTA GAAGCCAAAATGGTTGGCCACAAAAAGTCTGCTTGTACAAGGCTGAGGCTGAGTTGAGAGCATTCTTTGATGTGTATGAACAAGAAGGAAGCCATGCAGG TGGGATTCATCTAGAGATGACGGGTCAGAATGTGACTGAATGCATCGGTGGGTCAAATACGGTCACATTTGATGACCTGAGCTCATGTTACCACACACAT TGTGATCCCAGGCTCAATGCTT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_72931; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_260440
| Blastp | Phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic from Lycopersicon with 72.2% of identity |
|---|---|
| Blastx | Phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic from Nicotiana with 76.09% of identity |
| Eggnog | phospho-2-dehydro-3-deoxyheptonate aldolase(COG3200) |
| Kegg | Link to kegg annotations (544153) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019430963.1) |
| Pfam | Class-II DAHP synthetase family (PF01474.15) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |