Id Trinity | FTRINITY_DN57955_c1_g1_i20 |
---|---|
Name Transcript | Ll_transcript_257972 |
Sequence | TATAATTATTTTTTTAAAGAATTACTAATAATTAAATATAAATAATAAATAATATATATAAAATTTATACAATGTTAATTTTATTGGTGATATATATGTA CTGCAAAAATTGAATGATTATGGTAAGACCCGCGTGGCGGCTAGGACTTCCAATCGTTGAGGAAAGAAGGTTGTTTAGTTCAGAATTTCAGATGCAGTAT ATTTGTCTAACACGTGTCATTAACTAAAAGATATAAAGCGGGAGAGATCCTCTGTCCCAACCCAATAAATATTCACCAAATAGGATAAGTTTGCTTTTAT AATTATTTTATTTAATTAAATGTCACATTTTAATTAGTTTGAAAGAAATGAAACATAAAATGAGACAACATATCTGCTATCATATAAAGTGACGTTTTAG TTATTACAAAATCAATGTTCTTTATCTATACGTATTATATAAAAAAATATGAGAATAATAATAAAACTACTGTATACATTTGTTTTTCTATTTATATCAT GTACTCTTATTTGTTATTATAACTATGTAAGTAGCATTTTTTTCTAAGGATGTCTGAGCTTCAGTATCTAGGTTCGTTAACCAATTATTGCATCAACTGA AAAGTGAAAGCAACCAATTACTAAGAGATACTAGCAGACAGAATAATTAAGTCCAGTGTTTCCATTTATTTTGATGACCCTTTACTCATGCATTTATTTC TTGTTTCCTTTTCTACCTTCTTATGTTGCTATCAATCATTTGGTTTTTCAGTAATTAATTATATCCCAAAGGACACTGGAAATTAGGGACAAAATAGAGT AAAATATGGGATTTTCCCTTTGTATTTGGGGGAGGTGGGAAGTGGTGTGGGTTACATGTGAATAAGTTTGGAAAGGGTACAAGACGTTAGCAAATAACGT TTGAAACTTGAGAAATATCACATCATAATATAGTCATTTAAACAATTTTGTTGACAAGTAGGCTTAGTTGATTGTTACCCTTCTTAATGTCAACTATGTG CAATTTACTGGTTCTTCATGTATTTAAAAATAAAAAATAGTTATCCAAAAAAATTGGAGAGGAGTGCACGTCTCTCGCACATTAAAACTCTACATTTTTT TAATTTAAATACTCATAGGTTTCATACCATGAATGACCCGAGATAGTTACATGATTCTCTCGTTTAACTCGTAAATTGCATATTGGATTAGGCCTAGTGC AACTAGTTAAATGTGTCTGTGTCTTAGCACATGCCTTGGCCTGTAAACTTAGCTATTTTTTCTGTCATAATATACTGCAACATGGAGTTATCAAATTTAT CTAATTGTGACTCATTGCCTTCTCCACTTGGTGACAACTTATGTGACCTACGTGCTTGCGTCTTGTTGTTGTGTAGCTACTAGCTATGCACCCATATAAT ATCACAAGAGAATGTACATTCCCATAATCTATTTCAATGCTTAGTGATATTCTTCTCTTGTCACCTGCAACTTTTATCACTTTTGTTGAGCTTCTTTTAT TAACTTTGATGTAACAAAAGTGATATTGGCTGTCATCATAATTCATAACTAATCACATTTGTTACAGTCCCTAGTTCCTAATTCATCACACTTTATTTTA TTTGGTTCTGATTTACTGTTTCATATCTCCTGTGCTGTTCAATCATTGTATAGAATAGAACTGAAAATTATAGTCCCGAAGTTATATTAAGCAACAGCAA ACAGAAGAAGGGGAACAGCACAAGAAAATCAAAGGAAAATGGGTTTTTTGAAACTATTGGAGGTGGCTTCTGTGCCAGTTATTCAAGTCTTACTTATTGG TGCATTGGGAGCTATGATGTCAACTCACTATTTTGATCATCTTCTTTCTCCAGATTTTCGGAAATCCTTGAACAAAGTTGTCTTCCTTGTATTCACTCCT TCACTTGTCTTTGCTAGTTTTGCCAAGAGTGTTTCACTTGCGGATATGATATCATGGTGGTTTATGCCAGTTAACGTTGGACTTACCTTCTTTATTGGAG GGATTCTAGGATGGATACTTGTAAAATTACTAAAGCCAAACTTGAAAGTGGAAGGTCTTATAATTGCTTCATGTTCATCAGGAAATATGGGTAACCTTCC TATTGTAATTGTCCCTGCTATATGTGATGAAAAGGGAGGCCCATTTGGTAGAAGTGATATTTGCCACAACAATGCACTCTCTTATGCATCTTTCTCTATG GCGCTTGGTGGCATCTTCATTTGGACCTATACTTACCAGACAATACGAAGTAGATCTATGCGATATAAGGCACTTGAGGCTGCGCAGATTGTAAAGATTC CCAACAAAGATATTGATGCTAATGCAGAAACTCTCCTTCTCAAGGGAGAATACAATCAAAACATAGTGGCAGAAGTCCCTACATCAGATTATATTGTAGA CACTGAAAACCAAAGTATTGAAGAACAAGGTCAGTCCAGTGTATCGAAGAAGAGGAAAGAATCCTTTTGGCATAGACTGATAGAAGTTCTGAGCCAACTT GTTGAAGAACTAATGTCACCCCCAGCAATTGCTAGTTTTTTTGGCTTCCTGTTTGGCGCGGTTGCATGGCTAAGGAACCTAATAATCGGAGTCGATGCTC CATTCGCAGTTATCCAAGACACTCTTGTATTACTAGGGAATGGAACAATTCCCTGCATCACCCTTTTACTTGGTGGTAATCTCACTCAAGGCTTCAAATC CTCAAGTGTCAAACCATTGACCCTCATCAGCATCATCATAGCTAGATTTTTTGTACTACCTGCTATTGGATTCTTTATTGTCAAAGCTGCAGCAAATTTT GGCTTACTCCCCTTGGATCCTTTGTTTCAGTATGTGCTGGTCTTGCAGTATGCCATGCCACCAGCTATGAATATTAGTACCATGGCTCAGCTGTTTGATG TAGGTAATGAAGAGTGTGCAGTTATCCTATTGTGGACATATGTTGCTGCAGCTATAGCAATAACTGCTTGGTCAACATTCCTCATGTCAGTATTATCTTA AGGTGTCTACCTCTGCACTAATCACTGTATTGTCCAAAAAAACACTCTTTAGAGGATCAAACTCTATACAGCAGATTCCATTCACCACATTTGTTTCAGC CTATTGGTTACATGAAGATAGAAGAGTGGCTACTTCATATTTTTTAGTGAAATATTGAAATAAATAGGATTAGATTTTTGAGCCAGATTTTGAGATTGCT TACCTCTGTGCCATGAACACTGGTGCCAGATTACTCTTTTTAATACAACAATTAAAAAAAATGGTCACCACCTTTATACATTTGGAAGGAGGTGCCAAGT AGCATTTTTGGTGTGGTTCATTGATTTATTTTGTAAGAAGAAAAAATATATATCAAATAAGCTGAAAAGGTAAAAAGTGGCTGTTCCTTACAAATTTACA ATGCCTCAAAAAAATTGTAAACAATAAACTAATGGGAATAAAATGCAAAACAATTGCTACATAGTTATTTTCATCAGTCTGAAGAAGTTTCTGTTGTGTA CTTGCATACTTGGATCAGTTGTGGCCATAGGCTATGAAGAAATTGGCAGAAGCCATGATCTGTATCTTAAGAATTTGACTTGTTGAACTAAAGCTTGCCA TGGATACAAGGTATGGTTGTAATAGTGATGTGGTACAACTAAAGAGGCTATGAATCTGATAGTTGCTTCCAAATTCAAGTGTGTGAATTTTGATGCTGTA ATTGTGATTTAAGCAAAGAGTAATTTTTATAGCATAGGGGTTAGTCATAAAATTCCCCATTAATTGAGTATGTACAAATAAATAACAAATGAGTTTTACT CATCTTCCATTTAAGACACCTTTGAGAAGATCAAGGCCTTCAGCTGAAATACTTCTCCTCC BLAST |
Tissue | flowers |
Gene name | LI_gene_73037; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_257972
Blastp | Protein PIN-LIKES 7 from Arabidopsis with 56.19% of identity |
---|---|
Blastx | Protein PIN-LIKES 7 from Arabidopsis with 56.19% of identity |
Eggnog | Auxin Efflux Carrier(COG0679) |
Kegg | Link to kegg annotations (AT5G65980) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019445160.1) |
Pfam | Membrane transport protein (PF03547.17) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |