| Id Trinity | FTRINITY_DN57956_c1_g2_i1 |
|---|---|
| Name Transcript | Ll_transcript_260154 |
| Sequence | AAAGCCAGAACCAAATAATATAAAGTCGTAGAGAGTGGCACCATTTCCACCAAACTTCGAAAACTTTCCAACCTCTCCCACCAAAATGGCACCTGCACCT TCTCCTTCTGAAGAATTCATCTTCCGTTCCAAACTACCCGATATTTCTATTCCCACCCATCTTCCTTTACACTCTTACTGCTTCCAAAACCTCTCCCAAT TCGAACACCGCCCATGCCTCGTCAATGCCGACACCGGCGACACCTTCACCTACGCCGAAGTCGACCTCATATCCCGCAGAATCGCCACCGGCCTCGACAA AATCGGAATCCGTCAGGGTGACGTCATCATGCTCATCCTCCGCAACTGCCCCCAGTTCGCCCTCTCCTTCTTGGGCGCCTCACACCGTGGCTGCGCCGTC ACCACCGCCAACCCTTCTTACACGCCGGCTGAGCTGGCGAAACAAGCGGAGGCCACGAAAGCAAAACTAATCATAACACACGCTGCTTACGTGGACAAAA TAAAAACTTTCTGTGAAAGCAACGATGTAAAGGTGATATGCATTGATTCGTCACAAGAGGAAGGTGTTTCAAACTTCACGGTGTTAACTAACGCTGACGA GAAAGAAATCCCCGACGTTAAAATCAGCCCAGACGACGTCGTTGCAATCCCTTTCTCTTCAGGAACGAGTGGTTTACCTAAGGGAGTAATGTTAACACAT AAAAATTTAGTCACCACGGTGGCGCAGCTTGTTGACGGTGAGAATCCACACCAATACAGTGACAGCGACGACGTGCTTCTCTGTGTGCTTCCAATGTTTC ATATCTATGCGCTTAACTCAATTTTGCTGAGTGGGATACGTTCTGGCGCAGCGGTTTTGATCGTGCCGAAATATGAGATGAATACGTTGCTAGAGTATAT AGAGAAGTACAAGGTGACGGTGGCGTCGTTGGTGCCGCCGATTATTCTGGCGTTGGTTAAGAGTGGGGATGCGGTGAGATACGATTTGTCGTGTGTTCGG GCAGTGATAACAGGTGCGGCACCAATGGGAATGGAGATTGGAGAAGCTGTGAAAACTAGGCTTCCGAATGCCATACTTGGACAGGGATATGGGATGACAG AGGCTGGACCACTTTGTATAAGCTTAGCATTTGCGAAAGAGCCATTCAACATAAAGATAGGTGCATGTGGGAGCGTTGTTAGAAATGCTGAGATAAAAAT CGTGGACACAGAGATGGGTGCTTCGCTGTCCACAAACAAAATTGGTGAAATTTGCGTTAGAGGCACGAAAGTTATGAAAGGATACCTGAATGACGCAGAG GCGACAGAGAGAACTATAGACAAAGAAGGATGGTTACACACTGGTGATATTGGTTATTTTGACGATGATGAAGAGCTCTTCATCGTTGATCGGTTAAAGG AACTGATCAAATACAATGGATTCCAAGTAGCTCCTGCTGAACTAGAAGCAATGTTGATTGCTCACCCAAATATTTTTGATGCTGCTGTTGTTCCGTTAAA ACATGAAGTTGCCGGAGAAGTTCCAGTTGCATTTGTCGTGAGATCAAATAATGGTTCTAAGATCACGGAAGATGAAATCAAACAATATATTTCACAACAG GTTCTCTCTACCAAAATTATCAATAGTTTCTTTATTGTATACTGGAGTTTGTGGAGGAGTTTAAGGTCAGAATAAAAACACTTCAGAATTAATCATTTTT CTTTTACCTGAAAAAAAGACCCCTCAAAGTAACATGTTTAGTTATTATCTATTTATAACAATAGAAGAAATTATTACATAAAGAGTTTATATGTATCACA TTATATATTACTTTATCCTGTTGAAGCGTGTATAATAAATAAGTGAATAGTGATAAATTAACGAAAATATAATTTCATAACTTATTTTAGATTACAAATT AATTTGACTAAAAAAGAAGAGTTCTCTGACTAAAGTGTCATATGTATTAATCATATATTGGTATTTATTTATTTTTGATTGTAATGTTTTATTCTGGATG GGTGTGTATGGTTTTGGCAGGTGGTATCTTACAAGAGAATCAATAGAGTTTTCTTCACAGACACTATTCCTAAAGCAGCCTCAGGCAAAATTCTACGAAA GGAATTAAGTGCAAGGCTTAACGAAGGTTTAGTACAAGCCAATTAGGTTCGTGTGACACAAGAAAGTCATCAAGCCTTTGTGTTTTGGTTTTCTTCCTAT TTTTGTATGTTATTATATTATAAATACAATTGAACGACTTTTCTATTTCCATAAATAATTCAATAATTTAAGAATCAACAATAAAGAATCTACTCCTGGT TTGGCATATTCTCGGTTATGCCTTATGATATTAAAGATAATTTTTTCTGTCACGAATCTCTCTTGAGGATGGGGAAGAAGAGTCATAGTCTATGGATGTG TAGCTAGTTTATTGTTGTTTGGTCTATTTGGTTAACAAGAAATAAAACTATCTTTGAGTTGACGCCTTTTAATTTGGAGGTGGTATTGTTTTCTATCCAA CTTCACTCTTGGAATCTTATAATTGCTCGTTTCCCTTCTTTTTCCTTTTCTCTCTCAGATTAGGTATGAAACCCCTCTACTTGTATTTCTAGTTCTGTTT CTAATCGTGGATATGAGTATCACTTATTCTCCTAATCTTCTTTTTTATCTAATCTTCATATTGCTGATAAAAAAAAAAAAAAAAATGTAGGAGCCTCCTG CATAAAATTTTATATATTAATTATTTTTTâBLAST |
| Tissue | flowers |
| Gene name | LI_gene_73044; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_260154
| Blastp | 4-coumarate--CoA ligase 1 from Nicotiana with 64.65% of identity |
|---|---|
| Blastx | 4-coumarate--CoA ligase 1 from Nicotiana with 64.65% of identity |
| Eggnog | - |
| Kegg | Link to kegg annotations (107803673) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019464237.1) |
| Pfam | AMP-binding enzyme (PF00501.27) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |