| Id Trinity | FTRINITY_DN57958_c0_g1_i5 |
|---|---|
| Name Transcript | Ll_transcript_259285 |
| Sequence | AGGAAACAAGATTCATATAGAAAATATTATTTTCACAATCAACCTCTAACAACTTGGAGTTCTCCTTCTATTGACCATCTTTTATAAAAGAAGAAAAAAG AAAACCCAAATAGAAATACCGTGTGAAATTAAAGAAACTCAAGAAATTGCAGTCCCAAATCCCAATACGCATTAGCTGAGGTGAGAAGAAAAGTTGAAGT CGTTGATAAGCGATTCTCACAATCAGCTTATTTATATTACTTTATCTAATTCCAATCGCGGTCTTTCTCTTCTCACAAAAACCCACCCTTTTTCCATTTC CCCAATTTCTCCATTTCTAGGGTTTCCCAATTCTCACAATCTCTCGATTCCTTCATTCTCCTTCATGCTCTTTATCCCAATCACAACAAGATGTATAGCA ATTTCAAGGAACAAGCCATAGAATACGTTAAACAAGCCGTACAAGAAGACAATGCAGGAAACTACGCAAAAGCTTTCCCTCTCTACATGAACGCCTTGGA GTATTTCAAAACCCACCTTAAGTATGAAAAAAACCCTAAGATCAAGGAAGCAATCACTCACAAATTCACCGAGTATCTCCGTCGCGCCGAGGAGATCCGT TCTGTCCTTGACGATGGTGGTCCCGGCCCAGCTTCTAACGGGGACGCCGCGGTCGCCACGCGGCCGAAGACAAAGCCGAAGGATGGGGAAGGAGGTGATG GTGAGGATCCGGAGCAGGCTAAGCTTAGGGCTGGTCTTAATTCTGCGATCATAAGGGAAAAGCCTAATGTTAATTGGAATGATGTTGCCGGGTTAGAGAG CGCGAAACAGTCGTTGCAGGAGGCGGTTATCTTGCCTGTTAAGTTTCCTCAGTTCTTCACAGGTAAAAGACGACCCTGGAGGGCATTTTTGTTGTATGGA CCACCAGGAACAGGTAAATCATATTTGGCCAAGGCTGTTGCAACAGAAGCTGACTCCACCTTTTTCAGTATATCTTCATCAGACTTGGTTTCAAAGTGGA TGGGTGAAAGTGAAAAGTTGGTTTCGAACCTTTTCCAAATGGCTAGAGACAGTGCACCATCTATCATATTTATTGATGAAATAGACTCTCTATGTGGTCA GCGTGGTGAAGGAAATGAGAGTGAAGCTTCAAGACGAATTAAAACTGAACTTTTGGTGCAGATGCAGGGTGTAGGAAACAATGATCAGAAAGTTCTCGTT CTTGCAGCAACAAATACACCTTATGCTCTAGACCAGGCAATAAGGAGGCGTTTTGATAAGCGCATTTATATTCCACTACCAGATGTGAAGGCTCGCCAAC ACATGTTTAAGGTGCATCTAGGAGATACTCCCCATAACTTGACTGAAGGTGATTTTGAACACTTAGCTCGCAAGACAGAGGGGTTTTCAGGTTCAGACGT AGCTGTCTGTGTGAAAGATGTTTTATTTGAACCTGTTCGCAAGACTCAAGATGCCATGTTTTTCTTTAAGAATCATGAGGGTATGTGGGTCCCATGTGGA CCAAAGCAACAGGGTGCTGTTCAAATTACAATGCAGGACCTTGCTGCAAAAGGACTTGCTTCTAAGATCCTTCCACCACCAATATCCAGAACAGATTTTG ACAAGGTGCTTGCCAGACAAAGGCCCACAGTAAGCAAAAGTGACCTTGATGTTCATGAGAGATTCACAAAGGAGTTTGGAGAGGAAGGTTAATTTTGATG AGATTTTCACTTCAAAGATCCCATGCTGGTTTAAACATATTCTTAGATTTGTAATTTACTTAGCCATTGGAGCAGGTGAAATGCATTTCTTTTTAGTTCT GGGGGATGTGAATTCTCCTGTAACGAAAGTGGATTTATAAAAGTAAATACTCATTTTGCTTCTCCTAAATTGTGTATAAAACAGAATCCAAAGTGATCAG AAAAAATAACTTGTATGTGATCATTGCTTATGTTGGATTGTTGCTCTTTCCTTTTGAATGTAAATTTCACAAGATGGGTAAGAATTTCAGCAGCTATGCT TTCCTGAAGACAAAATAGTTTCATATGCTAATTAATATTCAT BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73059; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_259285
| Blastp | Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 from Arabidopsis with 88.51% of identity |
|---|---|
| Blastx | Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 from Arabidopsis with 88.11% of identity |
| Eggnog | endosome to lysosome transport via multivesicular body sorting pathway(ENOG410XRHN) |
| Kegg | Link to kegg annotations (AT2G27600) |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019453883.1) |
| Pfam | MIT (microtubule interacting and transport) domain (PF04212.17) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |