Id Trinity | FTRINITY_DN57967_c0_g1_i22 |
---|---|
Name Transcript | Ll_transcript_257997 |
Sequence | CGCATGATAGCTAAATAGGAATATTCATTAATATCCCTTCTTCTCTAGATCTCAACCCTTTTACCACTATCAAAAGATTGAGGCATAGCATAAATATTCA TCAAATTAATTTTCCTTAATTTATCTCATTTTATCCTTATCACTCAATTACCTACCCAACCTTCAATCACAATCTCAGATTTTTTTGAGTGTATCTTTCC CCCTAATTATTACGATTCTGTTTCATCTCTATTATATTTTATTATTTTTCATATTTTCAACACCAATTACGTGACTCAATTTCAGGTACCTTCTTCTCTT TCTTATTATTCATGTTCCTTTTTCACACAGCACTTTTTTCAATTCAATTCAATTGCTATTACCTTTCACTTGGTCTTTTATGATTTCCAGATCTGAACCC AAAGTTAGAAACTTTCATTCAAATGATTCATTGGGTCAAAATCAAAATCAAATTTTGTTGTGATTTAAGAACCCAAGTTTCAAAATAACCAACATGTCTG GTGCTATAGACATGGACCACGTTGGGTTTTCCAAATCCACGGCGGCTCCGGCCGCCGGCCACGGCAAGAAAACGGGTCCGGTTTCAATGGATCATGTGTT ACTTGCGTTGCGCGAGACGAAAGAAGAGAGAGATATTCGAATTCGGAGTTTGTTCAATTTCTTTGATGCTGCAAACAATGGGTACTTGGATTATGCTCAA ATTGAAGCAGGGTTGTCTGCACTGCAGATACCCCCTGAGTATAAGTATGCTAAGGATCTGTTCAAGGTGTGTGATGCTGATAGGGATGGGAGGATCGATT ACGATGATTTTCGTCGATATATGGATGATAAGGAGTTGGAACTTTACAGAATTTTTCAGGCTATTGATGTGGAACACAGTGGCTGCATTTTACCTGAAGA GCTTTGGGATGCACTTGTTAAGGCTGGTCCAAGTGGAAGATGTTTAGGCCCCTCTAGCATGTGGTCCTGGGTTTGATCCCATGATTATGTGTATGGAAGA AAACATTGGGAGGGGTCCTTGCTTATGCACTTGAACTATCCAAGAGATTAGTCTCTAAACTATTTGGTGAGAGATTTTCTAGAAAAACCAAAAAGGAACT GAGTAGCCTTTCTGAAGACTTGTTTATAATCAAACACAATAGTATTTCTTGATAAATATAGTCGACTCCACTTAGTGGGAAAGGGTCTTTTGTTGTTGAT TGCTAAGTTAGTATTCTCTTCATCCTTCTATAATATTATTACTTTTCAAGTGACATGAACTTGTTGTTGGCTATATTGCTTACATTTTCCATTTCCATGA GTGGTCCAAGTAAAGACATATTATCATTCTCCATGGGTTGACTGTGGTTTTGGTTATAACAACCTTGCCCTCAGAAACTTATAGAGCAAGCTTGTAGTTT AGGATTACTATCCTCTATAATTGACTAGAAGGTCTTATTTTTTAGGAACAGCACATTTGTTGCCATAGTTATAATAATTGTGTTAAAAACGTTTTGGAGG CTTGGAGGTTTTGCAATCTTTCATATCTTTTGTTTACTGTTGTTAATATGTGTCTCCTTCTAGGATGTAGTGATGTACTCCTGTGTTGGTTGTAGAGATC TAAAAAAATGGCAATAATTCTATGGACCTGCATGGTGCTTGGTATTTGTGTAGTATGTTTCAACTTAAATCTTCGATGGTGGATTCTATTGTGATATTGT CAGTCCTTTTATAAATTATATAGATAGGTGCTCAAGATGGTATTCTCTTGTGCCATTTCTGGAAGCTTTTGTCATTCTCAATTTCCAGTTTTTCCCTTAG TTTTATCATAAGCATATGCAGCTTCTATGCTGCAGGGATTGAAATGGATGAGGAGGAGCTCGCTCGCTTTGTAGAGCATGTCGATAAGGATAATAATGGG ATCATTACCTTTGAAGAATGGAGAGATTTTCTGCTACTTTATCCACATGAAGCAACTATTGAAAATATATATCATCATTGGGAGAGGGTATGCCTTGTAG ACATTGGAGAACAAGCAGTCATTCCTGAAGGGATTAGCAAGCATGTTCACAGGAGCAGATACTTTATTGCTGGCGCGATAGCCGGAGCTGCTTCTCGCAC AGCAACTGCTCCTCTTGATCGTCTCAAGGTAGTTTTACAAGTTCAGACTGGAAGTGCTTCTATTATGTCAGCTGCAATGAACATATGGAAACAAGATGGT TTATTAGGGTTTTTCCGTGGTAATGGATTAAATGTTGTGAAGGTAGCACCGGAAAGTGCTATCAAGTTTTATGCTTATGAAATGCTGAAAAATGTAATTG GAGAGGCTCAAGGGAACAATTCAGCAGATATTGGTACTGCTGGGAGACTATTTGCAGGTGGTATGGCTGGTGCGGTTGCACAGATGGCTATATATCCGAT GGATCTTATTAAAACTAGGTTACAGACTTGCGCTTCTGATGGTGGAAGGGTTCCTAAGCTGAGCAGACTTGCAAAGGATATATGGGTTCATGAGGGACCA CGGGCTTTCTACAGAGGGCTTGTTCCGTCTCTTCTCGGTATGATTCCTTATGCAGGCATTGATCTCACTGCTTATGACACCTTGAAAGATATGTCGAAGA GATATATTCTTGACAGTGAACCTGGTCCTCTAGTACAACTGGGATGTGGGACAATCTCAGGAGCGGTTGGAGCTACCTGTGTCTATCCACTGCAGGTTAT ACGGACAAGACTACAAGCACAGCCATGCAACTCTCCTACTGCTTACAAGGGAATGTCTGATGTATTTTGGAAAACTCTTGAGGATGAAGGCTTTAGAGGT TTCTATAAGGGTCTCTTTCCAAATCTCCTCAAAGTTGTGCCTGCTGCAAGCATTACTTATATGGTCTATGAAAATATGAAGAAGAAACTAGATCTAGATT AGAGTTGTTATAGTTTTTGCCTAGAAAACTGATCTACATGTCAAATATTATAGGAAGTCTTGAATTGTTGATGGCAAAAAAGAAAAGAGATAACTAGTCA TTTAGGCATTATTGCAAATAGTCATTCTTCTGAGGATATCATATAACACGATTTTTTAGTCAGAAAGTTTTTCCTCATGCTTATCTGAACTAAATGTTGA GAAATAGGATTATATTATGCCTAGATATATTGAAAGTAATAGTTGTTATCCTTATGGATATGTACTTTATGTGCTGTGTTCTAGAGTCAAAAGTGGAGAT GCTTAATTTTCTCTCCTCTATTTTTATGATTTAAGATGCAACAATAACATAGAGATTGACATGCGGATTTTGAGTGAATAAAAGTGATGGATGACATCTT TCTGAGGTTGAGGAAACAATGAAAAAAATGAATCCTTGCAAGTTGACTCAAATTGCTTAGATCTTTATTATCAAGACGTTGATTTAGTGTTGTAAGACCC GACTAGACCCCTGGGAATACTTAAAGGTTATGAGTTTGATTTTTGAGAGCGTCACTTGGTGAGAAAGACAGTCATACACTCTGAACGGGATTAGTTCCTT ATCGATAGGGTGAGGAAATACCTTTGATAGTATAAAAAAAATTTATAGACCTTTAACTATGATGGTTTGGAATTCACGTTTGGTGAATAATATTATATTT GTCACTCTAACATTCTGGTTTTTGTCTGCCTTATTGTGAGGGCCAAAAAAAATCTCTTGCTTGTTTAGCCATGTGGATTCAAGAGTTGCATAATTTGAAT GTGCACAAACTTGTCATTGTCTTGTATGGTATTTGGGTAGAAAAAACCAGTGATGTATATCTTTTTAGACAAAGAGTGGGAAAATTCTATGAATTATCTT TCCAGAAATTAATAATTGCC BLAST |
Tissue | flowers |
Gene name | LI_gene_73127; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_257997
Blastp | Calcium-binding mitochondrial carrier protein SCaMC-1 from Silurana with 43.26% of identity |
---|---|
Blastx | Calcium-binding mitochondrial carrier protein SCaMC-1 from Silurana with 43.09% of identity |
Eggnog | Solute carrier family 25 (Mitochondrial carrier(ENOG410XQ4P) |
Kegg | Link to kegg annotations (496457) |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019463607.1) |
Pfam | EF hand (PF13202.5) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |