Id Trinity | FTRINITY_DN57982_c0_g2_i25 |
---|---|
Name Transcript | Ll_transcript_258572 |
Sequence | CTCAGGTAGAAAAAATAATATGATAAAGCTTTTTATCTTTGTTTTTTGGGTGACATAACCTTTCTTTGAATCAACTATAAGCAAAAACATAAAAGGCATT AAGATTTTTCTGAACTATACAGTTCAATATTCCATTCCAACTTCATTGAATCAAAAAAAGTCAAAGAAAAAAAGGCACGGTATTTATCAACTTGCACTAA TTAGGTTCTGCAAGGCTATTACATTCGTTTTCTTTATCTGGGGGCGTAGAAGGGAATACTGTTCCTCCATCTCGAGTTTCTGAACTTGGACACCTCCAGC AATCTATCGGATTCCGTTTGGAGGATGCTATCAATCTTAGCAGAAATCCAGTGTTCAATCAAATGAAGTCACATAGCCAAGGTCCTGGTTCTGATTTTCA GTTTGGTGCTTTGGGCAAGTCTGTTGCAACCTCAGATGCAAACCTCTTTGCCACAATTGCTGGGTCTCAGGCATTGCCGTTACAAAAAGTCTTGCCGCCA AATTTAGCTTACACATCGGCTGGTCATCGTGAGAACTGGGGGGAGTCCGGCATGGCAGTTGCAAGCCCTATGACTGGTTCTTCAACGGATGACACCGATG ATAAAAATCAATGGTCTGAAAGGGATCAATTAGCTGTTGCATCTGCTGATTCCAGTGATAGATCAAAGGATAAATCAAACCAAAAGACATTACGACGGCT AGCTCAAAATCGGGAGGCTGCCAGGAAAAGCAGACTGAAAAAAAAGGCATATGTTCAACAATTAGAGAGTAGTAGACTGAAACTGACCCAACTTGAGCAA GAGCTCCAGAAAGCCCGCCAGCAGGGCTCGTTTATTTCAAGCACAGGAGATCAGGGCCATTCAATGAGTGGAAATGGTATTTAAACCTCTTTTATCTCCA ATCTTGTGCCTCAAGCTTGGTACCTTTAACATTGGATTAATGAACCTTCTACTTTTAGAAGTTTTTGAAATATTGAGTTTATTAATATCAAATTCAAAGC TGTAACTGTGGCCGATGTAAAAGGCAGCAACACTAGTTTTGACATTCGATAGCTTTGACATTCAATGTAAAATGTATGAAATCAGATTTGGGTTGTGGAC TTATGATTTTAGAGTTAAATTTGGCGATGTGTCTCTCGCTATTTTCCTTGAGGCCCTCTTGTTTAGTACCTTAGACGCCCTCTATGTATAACGTTAGTAC CTTCGCTGGTTGTTGATTTATGCTGTTTCATCCATCAGCTGCAAAGCTGTGAGATTCATGCAAAACAAAATTTATATAGCTATATTTGTTAACTCCTCTT TAAAGTTCTAGTAGTTACCCGAAGTACCGGATTGATGCAGTCTTTATGCAATAAGTGTTCCATGAAATAACGTGCTATGATTCCTTTTCCGGAAATAAAA CCAAAAGATCCTATGAAGGGGATACAGAGCCCTCTCTTAAATGGACTAGATTACACTGGTTACTAATTTTTACTGGCAGAATGAGTCTTAATGGAGATAC ACGACATGATAAGATTAGGAATGAATGCGTTAAAGAGGAAGTATGTGAAAAAATATGATAGTCTCCCTTAGATGGTTTGACCATTAGAAGCCCTGATAAG AAGAGTAGATCAAACCAATATTTAAACATCGAGTGAGACCAAGAAAATTATAGGTGAAGCCGTTAAAGAAATTATTTTTAAACGGCCTTTTTAAGGACAA GGTTTATGACAAAGCACAATGATGTCGTTTGACATGGGCAAACATACTTGTACGAAAAATACTCGGTTCCATCTTGCACTTCAATATTGAAAACTTCTGA TACTTAACAGAACTTGGTGCAACTATATGCACGTTGAGAAGTGAAGGCTTGCTATATTCTTGTGTTTTGACACCATATACTCTGTGGCATGGGGGGGGCC GGGAAGGGCTACATGGATTTTGCAAAAGCTCGTGTTGTTTTTATTCAGATCCTAAGTCAATTGTGTTAATCATTTTTGTATGCAGGCGCTATGCAATTTG ATGCAGCGTATGCACGATGGTTAGAAGAACATAATAGGCAAATCAATGAGTTAATGGCTGCAGTAAATTCTCACGCTGGAGATATTGAACTCCGTACAAT TGTTGACAATGTCATGACACAGTTTGATGAGATCTTCAGACTGAAAGGCATTGCAGCTAAAGCCGATGTTTTCCATATTCTGTCAGGAATGTGGAAGACT CCAGC BLAST |
Tissue | flowers |
Gene name | LI_gene_73271; |
Additional information | details; |
FPAB | abscising flower pedicels |
FPNAB | non-abscising flower pedicels |
LF1 | lower flowers stage 1 |
LF2 | lower flowers stage 2 |
LF3 | lower flowers stage 3 |
LF4 | lower flowers stage 4 |
UF1 | upper flowers stage 1 |
UF2 | upper flowers stage 2 |
UF3 | upper flowers stage 3 |
UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_258572
Blastp | Transcription factor HBP-1b(c1) from Triticum with 56.83% of identity |
---|---|
Blastx | Transcription factor HBP-1b(c1) from Triticum with 55.71% of identity |
Eggnog | - |
Kegg | - |
CantataDB | - |
Mirbase | - |
Ncbi protein | Link to NCBI protein (XP_019442922.1) |
Pfam | Basic region leucine zipper (PF07716.14) |
Rfam | - |
GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |