| Id Trinity | FTRINITY_DN57982_c0_g2_i27 |
|---|---|
| Name Transcript | Ll_transcript_258575 |
| Sequence | CTCAGGTAGAAAAAATAATATGATAAAGCTTTTTATCTTTGTTTTTTGGGTGACATAACCTTTCTTTGAATCAACTATAAGCAAAAACATAAAAGGCATT AAGATTTTTCTGAACTATACAGTTCAATATTCCATTCCAACTTCATTGAATCAAAAAAAGTCAAAGAAAAAAAGAATTTAAGGATCTTTTTTTTAGCTAT GTTTAGTTGAAGCTGGGTGCTTTATGAAATGGGGTGCTGATTTTGGTTATTGATGGGTAGTAGAACTAGAAAAGTGAACATTAACAGTGAGGAAGCTAAC AAATTTGTGAAAGTGATGCCAAGCTATGCTCCTTCATTGCCTTCTTCTAGTTCCATGGGCGTAGAAGGGAATACTGTTCCTCCATCTCGAGTTTCTGAAC TTGGACACCTCCAGCAATCTATCGGATTCCGTTTGGAGGATGCTATCAATCTTAGCAGAAATCCAGTGTTCAATCAAATGAAGTCACATAGCCAAGGTCC TGGTTCTGATTTTCAGTTTGGTGCTTTGGGCAAGTCTGTTGCAACCTCAGATGCAAACCTCTTTGCCACAATTGCTGGGTCTCAGGCATTGCCGTTACAA AAAGTCTTGCCGCCAAATTTAGCTTACACATCGGCTGGTCATCGTGAGAACTGGGGGGAGTCCGGCATGGCAGTTGCAAGCCCTATGACTGGTTCTTCAA CGGATGACACCGATGATAAAAATCAATGGTCTGAAAGGGATCAATTAGCTGTTGCATCTGCTGATTCCAGTGATAGATCAAAGGATAAATCAAACCAAAA GACATTACGACGGCTAGCTCAAAATCGGGAGGCTGCCAGGAAAAGCAGACTGAAAAAAAAGGCATATGTTCAACAATTAGAGAGTAGTAGACTGAAACTG ACCCAACTTGAGCAAGAGCTCCAGAAAGCCCGCCAGCAGGGCTCGTTTATTTCAAGCACAGGAGATCAGGGCCATTCAATGAGTGGAAATGGTATTTAAA CCTCTTTTATCTCCAATCTTGTGCCTCAAGCTTGGTACCTTTAACATTGGATTAATGAACCTTCTACTTTTAGAAGTTTTTGAAATATTGAGTTTATTAA TATCAAATTCAAAGCTGTAACTGTGGCCGATGTAAAAGGCAGCAACACTAGTTTTGACATTCGATAGCTTTGACATTCAATGTAAAATGTATGAAATCAG ATTTGGGTTGTGGACTTATGATTTTAGAGTTAAATTTGGCGATGTGTCTCTCGCTATTTTCCTTGAGGCCCTCTTGTTTAGTACCTTAGACGCCCTCTAT GTATAACGTTAGTACCTTCGCTGGTTGTTGATTTATGCTGTTTCATCCATCAGCTGCAAAGCTGTGAGATTCATGCAAAACAAAATTTATATAGCTATAT TTGTTAACTCCTCTTTAAAGTTCTAGTAGTTACCCGAAGTACCGGATTGATGCAGTCTTTATGCAATAAGTGTTCCATGAAATAACGTGCTATGATTCCT TTTCCGGAAATAAAACCAAAAGATCCTATGAAGGGGATACAGAGCCCTCTCTTAAATGGACTAGATTACACTGGTTACTAATTTTTACTGGCAGAATGAG TCTTAATGGAGATACACGACATGATAAGATTAGGAATGAATGCGTTAAAGAGGAAGTATGTGAAAAAATATGATAGTCTCCCTTAGATGGTTTGACCATT AGAAGCCCTGATAAGAAGAGTAGATCAAACCAATATTTAAACATCGAGTGAGACCAAGAAAATTATAGGTGAAGCCGTTAAAGAAATTATTTTTAAACGG CCTTTTTAAGGACAAGGTTTATGACAAAGCACAATGATGTCGTTTGACATGGGCAAACATACTTGTACGAAAAATACTCGGTTCCATCTTGCACTTCAAT ATTGAAAACTTCTGATACTTAACAGAACTTGGTGCAACTATATGCACGTTGAGAAGTGAAGGCTTGCTATATTCTTGTGTTTTGACACCATATACTCTGT GGCATGGGGGGGGCCGGGAAGGGCTACATGGATTTTGCAAAAGCTCGTGTTGTTTTTATTCAGATCCTAAGTCAATTGTGTTAATCATTTTTGTATGCAG GCGCTATGCAATTTGATGCAGCGTATGCACGATGGTTAGAAGAACATAATAGGCAAATCAATGAGTTAATGGCTGCAGTAAATTCTCACGCTGGAGATAT TGAACTCCGTACAATTGTTGACAATGTCATGACACAGTTTGATGAGATCTTCAGACTGAAAGGCATTGCAGCTAAAGCCGATGTTTTCCATATTCTGTCA GGAATGTGGAAGACTCCAGCTGAGAGATGTTTCATATGGATTGGAGACTTTCGCTCATCCGAGCTTCTCAAGCTGCTTGCAAATCAACTCGAACCTTTGA GCGAGCAGCAATTGATGGGCATCTACAACTTGCAGCAGTCTTCGCAGGAAGCCGAAGATGCTTTGTCCCAAGGAATGGATGCATTACAGCAATCACTGGC TGAGACATTGGCTAATGGTGCTCCTGGCCCATCAGGGTCTTCAGGAAATGTGGCAAATTATATGGGGCAAATGGCTGTAGCCATGGGAAAGCTTGGTACT CTTGAGGGTTTCCTTCGTCAGGCTGATAATCTGCGGCAGCAAACATTACAACAAATGCTTCGGATATTAACAACCAGGCAATCAGCCCGAGCTCTACTTG CAATTAGCGATTACTTCTCCCGACTGCGAGCCCTAAGCTCTCTATGGCTTGCCAGGCCAAGGGAGTAAAAAGTATTTCAAAGCTCCAGTCTATGTAGTTT TTCAAGCCTGACCCATTAAAGACACATTTCATATGTGCATTGAATGAGTCCTCAATGGAAGCTGGTCTCTTGACAATAATTTTCTCCAAAAATACTAAGA TTTTTCTACTCTACATGTAATATCTCTTCCTACTGCTAGTGTTGTGCAATCATTTTCTTTAATCCTTAACTATGCTTTGGCAATAGTTTCAATAATTTGA TTATGCAAGTGCTTGATAGGTGCAGGGAAATTTGCAGAATAGTGTTTGTAATTTAGGTTATGGTTGTCAAATGTATTTTAGAAATAAGCTTTGTTTGAGG GACATTTTCCTCCTTCGTTGTTGAACATGTGTACATGCAACTGTTATTAGGAAGACATTACTAACTAGCAACTGGATTTGTCTATTTTGACAAGTATATA TGTAGTTTATTTAACTAGTACACTGATTCATGAGAAAAAGTTGTAGGTTCTAAGAATTTAAGATTTTTTATGGTACACATAACAACAATTGAAGATCAAG TACCATATCCATTAATGAAGAGACAAATGCTTGTTTTTC BLAST |
| Tissue | flowers |
| Gene name | LI_gene_73271; |
| Additional information | details; |
| FPAB | abscising flower pedicels |
| FPNAB | non-abscising flower pedicels |
| LF1 | lower flowers stage 1 |
| LF2 | lower flowers stage 2 |
| LF3 | lower flowers stage 3 |
| LF4 | lower flowers stage 4 |
| UF1 | upper flowers stage 1 |
| UF2 | upper flowers stage 2 |
| UF3 | upper flowers stage 3 |
| UF4 | upper flowers stage 4 |
Annotations of Ll_transcript_258575
| Blastp | Transcription factor HBP-1b(c1) from Triticum with 56.16% of identity |
|---|---|
| Blastx | TGACG-sequence-specific DNA-binding protein TGA-2.1 from Nicotiana with 81.07% of identity |
| Eggnog | - |
| Kegg | - |
| CantataDB | - |
| Mirbase | - |
| Ncbi protein | Link to NCBI protein (XP_019442922.1) |
| Pfam | Basic region leucine zipper (PF07716.14) |
| Rfam | - |
| GO | Links to GO: General; Genes and gene products; Annotations; Ontology; Links to GO: General; Genes and gene products; Annotations; Ontology; |